RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 SRP19P09132 144 aaKnown RBP11.35□□□□□ -0.59
GPC1-209ENST00000495100 SSX7Q7RTT5 188 aa11.35□□□□□ -0.59
GPC1-209ENST00000495100 LRFN3Q9BTN0 628 aa11.35□□□□□ -0.59
GPC1-209ENST00000495100 MPC1Q9Y5U8 109 aa11.35□□□□□ -0.59
GPC1-209ENST00000495100 ZNF320A2RRD8 509 aa11.34□□□□□ -0.59
GPC1-209ENST00000495100 B4E171 279 aa11.34□□□□□ -0.59
GPC1-209ENST00000495100 TSPAN7P41732 249 aa11.34□□□□□ -0.59
GPC1-209ENST00000495100 HIST1H3AP68431 136 aa11.34□□□□□ -0.59
GPC1-209ENST00000495100 IL24Q13007 206 aa11.34□□□□□ -0.59
GPC1-209ENST00000495100 ICAM4Q14773 271 aa11.34□□□□□ -0.59
GPC1-209ENST00000495100 FAM78BQ5VT40 261 aa11.34□□□□□ -0.59
GPC1-209ENST00000495100 SMG1Q96Q15 3661 aaKnown RBP11.34□□□□□ -0.59
GPC1-209ENST00000495100 IFNL4K9M1U5 179 aa11.34□□□□□ -0.59
GPC1-209ENST00000495100 M0R296 226 aa11.34□□□□□ -0.59
GPC1-209ENST00000495100 MGST1P10620 155 aaKnown RBP11.34□□□□□ -0.59
GPC1-209ENST00000495100 UCP1P25874 307 aa11.34□□□□□ -0.59
GPC1-209ENST00000495100 DEFA6Q01524 100 aa11.34□□□□□ -0.59
GPC1-209ENST00000495100 WDR86Q86TI4 376 aa11.34□□□□□ -0.59
GPC1-209ENST00000495100 RAB40CQ96S21 281 aa11.34□□□□□ -0.59
GPC1-209ENST00000495100 GSN-AS1Q9NRJ2 163 aa11.34□□□□□ -0.59
GPC1-209ENST00000495100 ODAMA1E959 279 aa11.34□□□□□ -0.59
GPC1-209ENST00000495100 H0Y980 276 aa11.34□□□□□ -0.59
GPC1-209ENST00000495100 OR8U8P0C7N1 319 aa11.34□□□□□ -0.59
GPC1-209ENST00000495100 TRGC1P0CF51 173 aa11.34□□□□□ -0.59
GPC1-209ENST00000495100 ZNF718Q3SXZ3 478 aa11.34□□□□□ -0.59
GPC1-209ENST00000495100 ACSM6Q6P461 480 aa11.34□□□□□ -0.59
GPC1-209ENST00000495100 MEGF10Q96KG7 1140 aa11.34□□□□□ -0.59
GPC1-209ENST00000495100 FAM103A1Q9BTL3 118 aaKnown RBP11.34□□□□□ -0.59
GPC1-209ENST00000495100 KIAA1456Q9P272 454 aa11.34□□□□□ -0.59
GPC1-209ENST00000495100 AKAP13Q12802 2813 aa11.33□□□□□ -0.6
GPC1-209ENST00000495100 IGHV3-72A0A0B4J1Y9 119 aa11.33□□□□□ -0.6
GPC1-209ENST00000495100 PLAUP00749 431 aa11.33□□□□□ -0.6
GPC1-209ENST00000495100 TMEM42Q69YG0 159 aa11.33□□□□□ -0.6
GPC1-209ENST00000495100 PCSK4Q6UW60 755 aa11.33□□□□□ -0.6
GPC1-209ENST00000495100 MUCL1Q96DR8 90 aa11.33□□□□□ -0.6
GPC1-209ENST00000495100 ZFYVE26Q68DK2 2539 aa11.33□□□□□ -0.6
GPC1-209ENST00000495100 BCL2P10415 239 aa11.33□□□□□ -0.6
GPC1-209ENST00000495100 MIC13Q5XKP0 118 aa11.33□□□□□ -0.6
GPC1-209ENST00000495100 C16orf82Q7Z2V1 217 aa11.33□□□□□ -0.6
GPC1-209ENST00000495100 SNRNP40Q96DI7 357 aaKnown RBP11.33□□□□□ -0.6
GPC1-209ENST00000495100 ACY3Q96HD9 319 aa11.33□□□□□ -0.6
GPC1-209ENST00000495100 CPAMD8Q8IZJ3 1885 aa11.33□□□□□ -0.6
GPC1-209ENST00000495100 A0A1B0GUS0 222 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 A0A1W2PRD5 423 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 A0A1W2PRF3 423 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 A0A1W2PRM7 423 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 CEACAM18A8MTB9 384 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 SMPD2O60906 423 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 NDUFB4O95168 129 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 NAPSAO96009 420 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 IGKV1-39P01597 117 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 IGKV1D-39P04432 117 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 SP9P0CG40 484 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 DLX1P56177 255 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 COMMD1Q8N668 190 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 NHLRC2Q8NBF2 726 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 CCL17Q92583 94 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 RAB24Q969Q5 203 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 PLEKHA3Q9HB20 300 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 CLDN34H7C241 214 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 KLK10O43240 276 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 OR7C2O60412 319 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 CLDN14O95500 239 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 IGLV3-1P01715 115 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 OR10J4P0C629 311 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 PRR27Q6MZM9 219 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 SPSB3Q6PJ21 355 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 C9orf106Q8NAJ2 232 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 TAF15Q92804 592 aaKnown RBP eCLIP11.32□□□□□ -0.6
GPC1-209ENST00000495100 R3HDM4Q96D70 268 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 QTRT1Q9BXR0 403 aaKnown RBP11.32□□□□□ -0.6
GPC1-209ENST00000495100 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.32□□□□□ -0.6
GPC1-209ENST00000495100 TMPRSS2O15393 492 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 DNPH1O43598 174 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 ID3Q02535 119 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 NMSQ5H8A3 153 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 ZNF324BQ6AW86 544 aaPredicted RBP11.32□□□□□ -0.6
GPC1-209ENST00000495100 CCL13Q99616 98 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 DERL1Q9BUN8 251 aa11.32□□□□□ -0.6
GPC1-209ENST00000495100 H3BTX0 84 aa11.31□□□□□ -0.6
GPC1-209ENST00000495100 CYB5R3P00387 301 aaPredicted RBP11.31□□□□□ -0.6
GPC1-209ENST00000495100 CECR9P0C854 216 aa11.31□□□□□ -0.6
GPC1-209ENST00000495100 GALR1P47211 349 aa11.31□□□□□ -0.6
GPC1-209ENST00000495100 PAX9P55771 341 aa11.31□□□□□ -0.6
GPC1-209ENST00000495100 PROCRQ9UNN8 238 aa11.31□□□□□ -0.6
GPC1-209ENST00000495100 TRAV3A0A0B4J244 114 aa11.31□□□□□ -0.6
GPC1-209ENST00000495100 C11orf94C9JXX5 98 aa11.31□□□□□ -0.6
GPC1-209ENST00000495100 TMEM241Q24JQ0 296 aa11.31□□□□□ -0.6
GPC1-209ENST00000495100 BSXQ3C1V8 233 aa11.31□□□□□ -0.6
GPC1-209ENST00000495100 DUX4L9Q6RFH8 374 aaPredicted RBP11.31□□□□□ -0.6
GPC1-209ENST00000495100 FAM214BQ7L5A3 538 aa11.31□□□□□ -0.6
GPC1-209ENST00000495100 CLDND2Q8NHS1 167 aa11.31□□□□□ -0.6
GPC1-209ENST00000495100 FAM216AQ8WUB2 273 aa11.31□□□□□ -0.6
GPC1-209ENST00000495100 OR2V2Q96R30 315 aa11.31□□□□□ -0.6
GPC1-209ENST00000495100 GGACTQ9BVM4 153 aa11.31□□□□□ -0.6
GPC1-209ENST00000495100 RIMS4Q9H426 269 aaPredicted RBP11.31□□□□□ -0.6
GPC1-209ENST00000495100 DCAF16Q9NXF7 216 aa11.31□□□□□ -0.6
GPC1-209ENST00000495100 COA4Q9NYJ1 87 aa11.31□□□□□ -0.6
GPC1-209ENST00000495100 ARHGAP32A7KAX9 2087 aa11.31□□□□□ -0.6
GPC1-209ENST00000495100 GRIFINA4D1Z8 144 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms