RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 HERV-K104P61576 105 aa8.84□□□□□ -0.99
APTX-230ENST00000494649 RPL30P62888 115 aaKnown RBP8.84□□□□□ -0.99
APTX-230ENST00000494649 ZNF818PQ6ZRF7 136 aa8.84□□□□□ -0.99
APTX-230ENST00000494649 Q8N9W7 124 aa8.84□□□□□ -0.99
APTX-230ENST00000494649 BVESQ8NE79 360 aa8.84□□□□□ -0.99
APTX-230ENST00000494649 OR5AN1Q8NGI8 311 aa8.84□□□□□ -0.99
APTX-230ENST00000494649 SPATA3Q8NHX4 192 aa8.84□□□□□ -0.99
APTX-230ENST00000494649 NOL4LQ96MY1 436 aaPredicted RBP8.84□□□□□ -0.99
APTX-230ENST00000494649 CLCC1Q96S66 551 aa8.84□□□□□ -0.99
APTX-230ENST00000494649 PLSCR3Q9NRY6 295 aa8.84□□□□□ -0.99
APTX-230ENST00000494649 SLC35D1Q9NTN3 355 aa8.84□□□□□ -0.99
APTX-230ENST00000494649 WASHC3Q9Y3C0 194 aa8.84□□□□□ -0.99
APTX-230ENST00000494649 OR5H14A6NHG9 310 aa8.83□□□□□ -1
APTX-230ENST00000494649 DUTP33316 252 aaKnown RBP8.83□□□□□ -1
APTX-230ENST00000494649 RPS16P62249 146 aaKnown RBP8.83□□□□□ -1
APTX-230ENST00000494649 EBI3Q14213 229 aa8.83□□□□□ -1
APTX-230ENST00000494649 ZNF79Q15937 498 aa8.83□□□□□ -1
APTX-230ENST00000494649 SCGB2B2Q4G0G5 96 aa8.83□□□□□ -1
APTX-230ENST00000494649 ZNF660Q6AZW8 331 aaPredicted RBP8.83□□□□□ -1
APTX-230ENST00000494649 FAM71F2Q6NXP2 309 aa8.83□□□□□ -1
APTX-230ENST00000494649 C10orf99Q6UWK7 81 aa8.83□□□□□ -1
APTX-230ENST00000494649 KCTD9Q7L273 389 aa8.83□□□□□ -1
APTX-230ENST00000494649 KLHDC1Q8N7A1 406 aa8.83□□□□□ -1
APTX-230ENST00000494649 OR6F1Q8NGZ6 308 aa8.83□□□□□ -1
APTX-230ENST00000494649 SMIM4Q8WVI0 70 aa8.83□□□□□ -1
APTX-230ENST00000494649 HSPB9Q9BQS6 159 aa8.83□□□□□ -1
APTX-230ENST00000494649 GHITMQ9H3K2 345 aa8.83□□□□□ -1
APTX-230ENST00000494649 FBXL15Q9H469 300 aa8.83□□□□□ -1
APTX-230ENST00000494649 SERTAD4Q9NUC0 356 aa8.83□□□□□ -1
APTX-230ENST00000494649 RBMX2Q9Y388 322 aaKnown RBP8.83□□□□□ -1
APTX-230ENST00000494649 A6NHS1 94 aa8.82□□□□□ -1
APTX-230ENST00000494649 FCGR3BO75015 233 aa8.82□□□□□ -1
APTX-230ENST00000494649 APOA2P02652 100 aa8.82□□□□□ -1
APTX-230ENST00000494649 VDAC2P45880 294 aaPredicted RBP8.82□□□□□ -1
APTX-230ENST00000494649 PROK1P58294 105 aa8.82□□□□□ -1
APTX-230ENST00000494649 TAGLNQ01995 201 aaKnown RBP8.82□□□□□ -1
APTX-230ENST00000494649 PLGLAQ15195 96 aa8.82□□□□□ -1
APTX-230ENST00000494649 RNASE10Q5GAN6 216 aaKnown RBP8.82□□□□□ -1
APTX-230ENST00000494649 IDO2Q6ZQW0 420 aa8.82□□□□□ -1
APTX-230ENST00000494649 C16orf82Q7Z2V1 217 aa8.82□□□□□ -1
APTX-230ENST00000494649 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.82□□□□□ -1
APTX-230ENST00000494649 OR6Q1Q8NGQ2 317 aa8.82□□□□□ -1
APTX-230ENST00000494649 OR51H1Q8NH63 302 aa8.82□□□□□ -1
APTX-230ENST00000494649 TCTEX1D2Q8WW35 142 aa8.82□□□□□ -1
APTX-230ENST00000494649 GIMAP1Q8WWP7 306 aa8.82□□□□□ -1
APTX-230ENST00000494649 WFDC12Q8WWY7 111 aa8.82□□□□□ -1
APTX-230ENST00000494649 RASL11BQ9BPW5 248 aa8.82□□□□□ -1
APTX-230ENST00000494649 FXYD6Q9H0Q3 95 aa8.82□□□□□ -1
APTX-230ENST00000494649 TPSG1Q9NRR2 321 aa8.82□□□□□ -1
APTX-230ENST00000494649 NBR2O15453 112 aa8.82□□□□□ -1
APTX-230ENST00000494649 CRYZL1O95825 349 aa8.82□□□□□ -1
APTX-230ENST00000494649 IFNA6P05013 189 aa8.82□□□□□ -1
APTX-230ENST00000494649 PI3P19957 117 aa8.82□□□□□ -1
APTX-230ENST00000494649 COMPP49747 757 aaPredicted RBP8.82□□□□□ -1
APTX-230ENST00000494649 PPP5CP53041 499 aa8.82□□□□□ -1
APTX-230ENST00000494649 CNPY1Q3B7I2 92 aa8.82□□□□□ -1
APTX-230ENST00000494649 PHLDA2Q53GA4 152 aa8.82□□□□□ -1
APTX-230ENST00000494649 DHRS11Q6UWP2 260 aa8.82□□□□□ -1
APTX-230ENST00000494649 CCDC190Q86UF4 302 aa8.82□□□□□ -1
APTX-230ENST00000494649 FAM71E2Q8N5Q1 922 aa8.82□□□□□ -1
APTX-230ENST00000494649 C15orf40Q8WUR7 153 aa8.82□□□□□ -1
APTX-230ENST00000494649 SOSTQ9BQB4 213 aa8.82□□□□□ -1
APTX-230ENST00000494649 C16orf95Q9H693 158 aa8.82□□□□□ -1
APTX-230ENST00000494649 RANBP3Q9H6Z4 567 aaPredicted RBP8.82□□□□□ -1
APTX-230ENST00000494649 SLC25A17O43808 307 aa8.81□□□□□ -1
APTX-230ENST00000494649 RAB3DO95716 219 aa8.81□□□□□ -1
APTX-230ENST00000494649 RLN1P04808 185 aa8.81□□□□□ -1
APTX-230ENST00000494649 GNRHRP30968 328 aa8.81□□□□□ -1
APTX-230ENST00000494649 MC5RP33032 325 aa8.81□□□□□ -1
APTX-230ENST00000494649 THBS3P49746 956 aa8.81□□□□□ -1
APTX-230ENST00000494649 SPANXN2Q5MJ10 180 aa8.81□□□□□ -1
APTX-230ENST00000494649 STEAP1BQ6NZ63 245 aa8.81□□□□□ -1
APTX-230ENST00000494649 ZNF329Q86UD4 541 aa8.81□□□□□ -1
APTX-230ENST00000494649 VKORC1L1Q8N0U8 176 aa8.81□□□□□ -1
APTX-230ENST00000494649 Q8N402 240 aa8.81□□□□□ -1
APTX-230ENST00000494649 MOB3AQ96BX8 217 aa8.81□□□□□ -1
APTX-230ENST00000494649 FLYWCH2Q96CP2 140 aaKnown RBP8.81□□□□□ -1
APTX-230ENST00000494649 HARBI1Q96MB7 349 aa8.81□□□□□ -1
APTX-230ENST00000494649 THAP7Q9BT49 309 aaPredicted RBP8.81□□□□□ -1
APTX-230ENST00000494649 SRRM4A7MD48 611 aaKnown RBP8.81□□□□□ -1
APTX-230ENST00000494649 FCN1O00602 326 aa8.81□□□□□ -1
APTX-230ENST00000494649 SHOXO15266 292 aa8.81□□□□□ -1
APTX-230ENST00000494649 RAMP3O60896 148 aa8.81□□□□□ -1
APTX-230ENST00000494649 TAS2R19P59542 299 aa8.81□□□□□ -1
APTX-230ENST00000494649 MFSD4AQ8N468 514 aa8.81□□□□□ -1
APTX-230ENST00000494649 DDB2Q92466 427 aa8.81□□□□□ -1
APTX-230ENST00000494649 KIAA1456Q9P272 454 aa8.81□□□□□ -1
APTX-230ENST00000494649 METTL1Q9UBP6 276 aaKnown RBP8.81□□□□□ -1
APTX-230ENST00000494649 ZNF107Q9UII5 783 aaPredicted RBP8.81□□□□□ -1
APTX-230ENST00000494649 GAB2Q9UQC2 676 aa8.81□□□□□ -1
APTX-230ENST00000494649 A3GALT2U3KPV4 340 aa8.81□□□□□ -1
APTX-230ENST00000494649 FBN3Q75N90 2809 aa8.8□□□□□ -1
APTX-230ENST00000494649 ANK2Q01484 3957 aa8.8□□□□□ -1
APTX-230ENST00000494649 TRRAPQ9Y4A5 3859 aa8.8□□□□□ -1
APTX-230ENST00000494649 PLXNB1O43157 2135 aa8.8□□□□□ -1
APTX-230ENST00000494649 LINC00854A0A1B0GVQ3 168 aa8.8□□□□□ -1
APTX-230ENST00000494649 M0QZK8 103 aa8.8□□□□□ -1
APTX-230ENST00000494649 CTDSPLO15194 276 aa8.8□□□□□ -1
APTX-230ENST00000494649 FGF16O43320 207 aa8.8□□□□□ -1
APTX-230ENST00000494649 RPA2P15927 270 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms