RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 IFNA14P01570 189 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 NPY1RP25929 384 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 HTR2CP28335 458 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 COILP38432 576 aaPredicted RBP2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 DSCR4P56555 118 aaPredicted RBP2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 IL5RAQ01344 420 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 IFFO1Q0D2I5 559 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 PNOCQ13519 176 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 CCSMST1Q4G0I0 132 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 FAM27D1Q5T7N8 215 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 DUPD1Q68J44 220 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 GLT6D1Q7Z4J2 308 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 SPATA12Q7Z6I5 190 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 C17orf78Q8N4C9 275 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 SPICQ8N5J4 248 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 OR4K17Q8NGC6 315 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 OR51A7Q8NH64 312 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 JOSD2Q8TAC2 188 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 UBALD1Q8TB05 177 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 NDNFQ8TB73 568 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 LRRC20Q8TCA0 184 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 ARL5BQ96KC2 179 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 Q96MT0 163 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 HINT2Q9BX68 163 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 PRRG3Q9BZD7 231 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 ARV1Q9H2C2 271 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 TRABDQ9H4I3 376 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 DHX35Q9H5Z1 703 aaKnown RBP2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 RBFOX1Q9NWB1 397 aaKnown RBP2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 ZNF257Q9Y2Q1 563 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 V9GYY9 64 aa2.95□□□□□ -1.94
SSX2IP-208ENST00000490476 H3BUX3 64 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 TNFRSF11BO00300 401 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 BPY2O14599 106 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 HLA-DQA1P01909 254 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 MRPL3P09001 348 aaKnown RBP2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 ZNF14P17017 642 aaPredicted RBP2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 IGFBP3P17936 291 aaPredicted RBP2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 AZU1P20160 251 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 HCCSP53701 268 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 KRTAP12-2P59991 146 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 RAB8AP61006 207 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 SLC35A1P78382 337 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 CCL8P80075 99 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 IFITM3Q01628 133 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 RPL18AQ02543 176 aaKnown RBP2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 ST3GAL4Q11206 333 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 STX4Q12846 297 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 NAB1Q13506 487 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 TRIP13Q15645 432 aaPredicted RBP2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 LY6EQ16553 131 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 LGALS9BQ3B8N2 356 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 CPTPQ5TA50 214 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 FAM71E1Q6IPT2 247 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 ZFP1Q6P2D0 407 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 TMPRSS11AQ6ZMR5 421 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 SGPP2Q8IWX5 399 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 OR4X2Q8NGF9 303 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 CLHC1Q8NHS4 586 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 CIRBP-AS1Q8TBR5 109 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 DEFB104AQ8WTQ1 72 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 TMEM234Q8WY98 164 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 HGDQ93099 445 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 L3HYPDHQ96EM0 354 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 RDH12Q96NR8 316 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 PRAP1Q96NZ9 151 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 TEAD3Q99594 435 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 RSG1Q9BU20 258 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 MAP1LC3CQ9BXW4 147 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 FAM96AQ9H5X1 160 aa2.94□□□□□ -1.94
SSX2IP-208ENST00000490476 KIR2DS1A0A191URI9 304 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 RAB19A4D1S5 217 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 TVP23AA6NH52 213 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 FAM25EA8MYX2 175 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 M0R1X1 148 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 MANBAO00462 879 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 SOCS1O15524 211 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 ENSAO43768 121 aaKnown RBP2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 EIF1BO60739 113 aaKnown RBP2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 TTC4O95801 387 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 CECR9P0C854 216 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 ZNF32P17041 273 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 CCNOP22674 350 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 KRTAP5-9P26371 169 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 APLNRP35414 380 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 OPRK1P41145 380 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 EIF1P41567 113 aaKnown RBP2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 RPL31P62899 125 aaKnown RBP2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 EBI3Q14213 229 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 HBMQ6B0K9 141 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 PID1Q7Z2X4 250 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 LINC00469Q8N7U9 141 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 TMEM35BQ8NCS4 154 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 TTLQ8NG68 377 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 OR2V1Q8NHB1 315 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 DCAKDQ8WVC6 231 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 KCNS1Q96KK3 526 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 TOLLIPQ9H0E2 274 aa2.93□□□□□ -1.94
SSX2IP-208ENST00000490476 C8orf17Q9NRJ1 99 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms