RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 MBD3L5A6NJ08 208 aaPredicted RBP11.87□□□□□ -0.51
ABCB1-207ENST00000488737 FAM90A9PA6NNJ1 464 aa11.87□□□□□ -0.51
ABCB1-207ENST00000488737 WT1P19544 449 aaPredicted RBP11.87□□□□□ -0.51
ABCB1-207ENST00000488737 SSTR5P35346 364 aa11.87□□□□□ -0.51
ABCB1-207ENST00000488737 CFHR2P36980 270 aa11.87□□□□□ -0.51
ABCB1-207ENST00000488737 EIF2S3P41091 472 aaKnown RBP11.87□□□□□ -0.51
ABCB1-207ENST00000488737 VWC2Q2TAL6 325 aa11.87□□□□□ -0.51
ABCB1-207ENST00000488737 OR2B11Q5JQS5 317 aa11.87□□□□□ -0.51
ABCB1-207ENST00000488737 CD177Q8N6Q3 437 aa11.87□□□□□ -0.51
ABCB1-207ENST00000488737 OR10P1Q8NGE3 313 aa11.87□□□□□ -0.51
ABCB1-207ENST00000488737 MBD3L2Q8NHZ7 208 aaPredicted RBP11.87□□□□□ -0.51
ABCB1-207ENST00000488737 AGMATQ9BSE5 352 aa11.87□□□□□ -0.51
ABCB1-207ENST00000488737 SLC39A9Q9NUM3 307 aa11.87□□□□□ -0.51
ABCB1-207ENST00000488737 DKK4Q9UBT3 224 aa11.87□□□□□ -0.51
ABCB1-207ENST00000488737 FZR1Q9UM11 496 aa11.87□□□□□ -0.51
ABCB1-207ENST00000488737 SLC25A15Q9Y619 301 aa11.87□□□□□ -0.51
ABCB1-207ENST00000488737 SRRM5B3KS81 715 aa11.86□□□□□ -0.51
ABCB1-207ENST00000488737 ZNF737O75373 536 aa11.86□□□□□ -0.51
ABCB1-207ENST00000488737 GZMHP20718 246 aa11.86□□□□□ -0.51
ABCB1-207ENST00000488737 PRDX2P32119 198 aa11.86□□□□□ -0.51
ABCB1-207ENST00000488737 RPS10P46783 165 aaKnown RBP11.86□□□□□ -0.51
ABCB1-207ENST00000488737 FGF8P55075 233 aaPredicted RBP11.86□□□□□ -0.51
ABCB1-207ENST00000488737 ELLP55199 621 aaPredicted RBP11.86□□□□□ -0.51
ABCB1-207ENST00000488737 PPP1R35Q8TAP8 253 aa11.86□□□□□ -0.51
ABCB1-207ENST00000488737 Q8WTZ3 238 aa11.86□□□□□ -0.51
ABCB1-207ENST00000488737 OPN3Q9H1Y3 402 aaPredicted RBP11.86□□□□□ -0.51
ABCB1-207ENST00000488737 SDF2L1Q9HCN8 221 aa11.86□□□□□ -0.51
ABCB1-207ENST00000488737 CLN8Q9UBY8 286 aa11.86□□□□□ -0.51
ABCB1-207ENST00000488737 PSG11Q9UQ72 335 aa11.86□□□□□ -0.51
ABCB1-207ENST00000488737 CTXND1A0A1B0GTU2 59 aa11.85□□□□□ -0.51
ABCB1-207ENST00000488737 SPAARA0A1B0GVQ0 90 aa11.85□□□□□ -0.51
ABCB1-207ENST00000488737 LINC00473A8K010 186 aa11.85□□□□□ -0.51
ABCB1-207ENST00000488737 CYB5R3P00387 301 aaPredicted RBP11.85□□□□□ -0.51
ABCB1-207ENST00000488737 RND2P52198 227 aa11.85□□□□□ -0.51
ABCB1-207ENST00000488737 CR1LQ2VPA4 569 aa11.85□□□□□ -0.51
ABCB1-207ENST00000488737 C3orf36Q3SXR2 165 aa11.85□□□□□ -0.51
ABCB1-207ENST00000488737 Q3ZCU0 254 aa11.85□□□□□ -0.51
ABCB1-207ENST00000488737 AARDQ4LEZ3 155 aa11.85□□□□□ -0.51
ABCB1-207ENST00000488737 FAM53AQ6NSI3 398 aaPredicted RBP11.85□□□□□ -0.51
ABCB1-207ENST00000488737 BTNL3Q6UXE8 466 aa11.85□□□□□ -0.51
ABCB1-207ENST00000488737 RPP25LQ8N5L8 163 aaKnown RBP11.85□□□□□ -0.51
ABCB1-207ENST00000488737 OR13D1Q8NGV5 346 aa11.85□□□□□ -0.51
ABCB1-207ENST00000488737 LHX4Q969G2 390 aa11.85□□□□□ -0.51
ABCB1-207ENST00000488737 JPT1Q9UK76 154 aa11.85□□□□□ -0.51
ABCB1-207ENST00000488737 PRR14LQ5THK1 2151 aa11.85□□□□□ -0.51
ABCB1-207ENST00000488737 CEBPZOSA8MTT3 80 aa11.85□□□□□ -0.51
ABCB1-207ENST00000488737 MGST3O14880 152 aa11.85□□□□□ -0.51
ABCB1-207ENST00000488737 ZG16O60844 167 aa11.85□□□□□ -0.51
ABCB1-207ENST00000488737 NQO2P16083 231 aa11.85□□□□□ -0.51
ABCB1-207ENST00000488737 FGF7P21781 194 aa11.85□□□□□ -0.51
ABCB1-207ENST00000488737 GNB2P62879 340 aa11.85□□□□□ -0.51
ABCB1-207ENST00000488737 SNX22Q96L94 193 aa11.85□□□□□ -0.51
ABCB1-207ENST00000488737 IGHV3-43A0A0B4J1X8 118 aa11.84□□□□□ -0.51
ABCB1-207ENST00000488737 MARCH11A6NNE9 402 aa11.84□□□□□ -0.51
ABCB1-207ENST00000488737 ST8SIA5O15466 376 aa11.84□□□□□ -0.51
ABCB1-207ENST00000488737 TGOLN2O43493 480 aa11.84□□□□□ -0.51
ABCB1-207ENST00000488737 YPEL1O60688 119 aa11.84□□□□□ -0.51
ABCB1-207ENST00000488737 IGKV1D-33P01593 117 aa11.84□□□□□ -0.51
ABCB1-207ENST00000488737 IGKV1-33P01594 117 aa11.84□□□□□ -0.51
ABCB1-207ENST00000488737 TFF1P04155 84 aa11.84□□□□□ -0.51
ABCB1-207ENST00000488737 IGHV3-43DP0DP04 118 aa11.84□□□□□ -0.51
ABCB1-207ENST00000488737 MDKP21741 143 aaPredicted RBP11.84□□□□□ -0.51
ABCB1-207ENST00000488737 ERVFRD-1P60508 538 aa11.84□□□□□ -0.51
ABCB1-207ENST00000488737 HOXA4Q00056 320 aaPredicted RBP11.84□□□□□ -0.51
ABCB1-207ENST00000488737 KIAA0141Q14154 515 aaPredicted RBP11.84□□□□□ -0.51
ABCB1-207ENST00000488737 DEFB109BQ30KR1 87 aa11.84□□□□□ -0.51
ABCB1-207ENST00000488737 ACSM6Q6P461 480 aa11.84□□□□□ -0.51
ABCB1-207ENST00000488737 TPRX1Q8N7U7 411 aa11.84□□□□□ -0.51
ABCB1-207ENST00000488737 OR2Z1Q8NG97 314 aa11.84□□□□□ -0.51
ABCB1-207ENST00000488737 YPEL2Q96QA6 119 aa11.84□□□□□ -0.51
ABCB1-207ENST00000488737 CTDSP1Q9GZU7 261 aa11.84□□□□□ -0.51
ABCB1-207ENST00000488737 NCOR1P1Q9H4R4 102 aa11.84□□□□□ -0.51
ABCB1-207ENST00000488737 DOCK11Q5JSL3 2073 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 CELSR3Q9NYQ7 3312 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 IGKV1D-17A0A075B6S4 117 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 TMEM250H0YL14 139 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 CLDN34H7C241 214 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 RBFOX2O43251 390 aaKnown RBP eCLIP11.83□□□□□ -0.52
ABCB1-207ENST00000488737 SOX15O60248 233 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 GFRA3O60609 400 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 CXCL1P09341 107 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 EGR1P18146 543 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 DUTP33316 252 aaKnown RBP11.83□□□□□ -0.52
ABCB1-207ENST00000488737 GPR12P47775 334 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 CTAG1AP78358 180 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 ZNF343Q6P1L6 599 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 ZADH2Q8N4Q0 377 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 RFESDQ8TAC1 157 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 R3HDM4Q96D70 268 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 ZNF251Q9BRH9 671 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 MANBALQ9NQG1 85 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 HCFC1P51610 2035 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 C17orf112F2Z3M2 114 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 F2RL2O00254 374 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 HPRT1P00492 218 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 IGHV3-13P01766 116 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 CD55P08174 381 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 HOXA5P20719 270 aa11.83□□□□□ -0.52
ABCB1-207ENST00000488737 MEF2BQ02080 365 aaPredicted RBP11.83□□□□□ -0.52
ABCB1-207ENST00000488737 ZNF674Q2M3X9 581 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms