RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 TMEM159Q96B96 161 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 ZNF501Q96CX3 271 aaPredicted RBP2.22□□□□□ -2.05
HMGN4-202ENST00000477243 BMFQ96LC9 184 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 SMIM14Q96QK8 99 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 OR4K3Q96R72 315 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 EBF4Q9BQW3 602 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 CHCHD5Q9BSY4 110 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 MRIQ9BWK5 157 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 C1QTNF4Q9BXJ3 329 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 MRPL20Q9BYC9 149 aaKnown RBP2.22□□□□□ -2.05
HMGN4-202ENST00000477243 LINC00597Q9H2U6 94 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 JPT2Q9H910 190 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 NANOGQ9H9S0 305 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 EDA2RQ9HAV5 297 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 SLCO1B3Q9NPD5 702 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 LYRM2Q9NU23 88 aaPredicted RBP2.22□□□□□ -2.05
HMGN4-202ENST00000477243 THAP10Q9P2Z0 257 aaPredicted RBP2.22□□□□□ -2.05
HMGN4-202ENST00000477243 OR12D3Q9UGF7 316 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 KLK13Q9UKR3 277 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 SIGLEC7Q9Y286 467 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 YTHDF2Q9Y5A9 579 aaKnown RBP2.22□□□□□ -2.05
HMGN4-202ENST00000477243 ADAMTS9Q9P2N4 1935 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 MGAQ8IWI9 3026 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 PHIPQ8WWQ0 1821 aa2.21□□□□□ -2.05
HMGN4-202ENST00000477243 UBR2Q8IWV8 1755 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 SDK1Q7Z5N4 2213 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 A0A087WWV3 80 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 IGHV1-69DA0A0B4J2H0 117 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 IGHV3-16A0A0C4DH30 117 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 MAP1LC3B2A6NCE7 125 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 ZNF98A6NK75 572 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 BTNL10A8MVZ5 291 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 F8W036 122 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 G3V2T6 193 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 K7EQS6 105 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 PEX7O00628 323 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 TPST1O60507 370 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 ZNF780AO75290 641 aaPredicted RBP2.21□□□□□ -2.06
HMGN4-202ENST00000477243 NTN1O95631 604 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 CCNE2O96020 404 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 CYB5R3P00387 301 aaPredicted RBP2.21□□□□□ -2.06
HMGN4-202ENST00000477243 CA2P00918 260 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 PDYNP01213 254 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 ATP5G1P05496 136 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 CD48P09326 243 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 CECR9P0C854 216 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 RNF224P0DH78 156 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 IGHV3-43DP0DP04 118 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 COX4I1P13073 169 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 PGAM2P15259 253 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 ZNF708P17019 499 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 CXCL3P19876 107 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 ZBTB25P24278 435 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 GADD45AP24522 165 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 CA5AP35218 305 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 PHBP35232 272 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 CTRLP40313 264 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 CDKN2BP42772 138 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 MEOX2P50222 304 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 NDUFA8P51970 172 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 RPS24P62847 133 aaKnown RBP2.21□□□□□ -2.06
HMGN4-202ENST00000477243 DYNLL1P63167 89 aaKnown RBP2.21□□□□□ -2.06
HMGN4-202ENST00000477243 FABP5Q01469 135 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 TMEM267Q0VDI3 215 aaPredicted RBP2.21□□□□□ -2.06
HMGN4-202ENST00000477243 SMIM21Q3B7S5 101 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 Q499Y3 187 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 TMEM236Q5W0B7 351 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 ZNF343Q6P1L6 599 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 GSG1LQ6UXU4 331 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 Q6ZPA2 131 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 IDO2Q6ZQW0 420 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 ZNF493Q6ZR52 646 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 STRADAQ7RTN6 431 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 SLC16A13Q7RTY0 426 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 ANGPTL5Q86XS5 388 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 ZBTB8OSQ8IWT0 167 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 SLC25A45Q8N413 288 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 ZNF614Q8N883 585 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 GPR26Q8NDV2 337 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 OR9I1Q8NGQ6 314 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 CD200R1Q8TD46 325 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 RXFP4Q8TDU9 374 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 NTN5Q8WTR8 489 aaPredicted RBP2.21□□□□□ -2.06
HMGN4-202ENST00000477243 DNAJC9Q8WXX5 260 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 RPL36ALQ969Q0 106 aaKnown RBP2.21□□□□□ -2.06
HMGN4-202ENST00000477243 ANKRD36BP1Q96IX9 119 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 SLC35E1Q96K37 410 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 ZNF285Q96NJ3 590 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 SEC22CQ9BRL7 303 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 RTBDNQ9BSG5 229 aaPredicted RBP2.21□□□□□ -2.06
HMGN4-202ENST00000477243 TMEM204Q9BSN7 226 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 MS4A8Q9BY19 250 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 MAP1LC3BQ9GZQ8 125 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 SH3BGRL3Q9H299 93 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 SPNS1Q9H2V7 528 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 ZSCAN16Q9H4T2 348 aaPredicted RBP2.21□□□□□ -2.06
HMGN4-202ENST00000477243 C6orf106Q9H6K1 298 aaPredicted RBP2.21□□□□□ -2.06
HMGN4-202ENST00000477243 DOCK5Q9H7D0 1870 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 TPT1P8Q9HAU6 139 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 LRTM1Q9HBL6 345 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms