RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 RNF175Q8N4F7 328 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 UBL4BQ8N7F7 174 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 TMEM75Q8N9X5 138 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 OR2M3Q8NG83 312 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 OR2V1Q8NHB1 315 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 JOSD2Q8TAC2 188 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 SLC35B4Q969S0 331 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 GALMQ96C23 342 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 PHYHIPLQ96FC7 376 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 ACY3Q96HD9 319 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 REEP6Q96HR9 211 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 ANKRD36BP1Q96IX9 119 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 SLC35G5Q96KT7 338 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 CMSS1Q9BQ75 279 aaKnown RBP2.83□□□□□ -1.96
VPS13D-207ENST00000476169 NDFIP1Q9BT67 221 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 TRABDQ9H4I3 376 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 C11orf49Q9H6J7 331 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 NMNAT1Q9HAN9 279 aaPredicted RBP2.83□□□□□ -1.96
VPS13D-207ENST00000476169 ZNF391Q9UJN7 358 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 DNAJC12Q9UKB3 198 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 BRWD3Q6RI45 1802 aa2.83□□□□□ -1.96
VPS13D-207ENST00000476169 CICQ96RK0 1608 aaPredicted RBP2.82□□□□□ -1.96
VPS13D-207ENST00000476169 RREB1Q92766 1687 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 ANKRD26Q9UPS8 1709 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 CASZ1Q86V15 1759 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 DYSFO75923 2080 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 A0A087WUJ7 227 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 IGHV1-45A0A0A0MS14 117 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 EEF1E1-BLOC1S5C9J1V9 151 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 TMEM250H0YL14 139 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 EEF1E1O43324 174 aaKnown RBP2.82□□□□□ -1.96
VPS13D-207ENST00000476169 STK16O75716 305 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 OR2B3O76000 313 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 IGKV3-15P01624 115 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 ADRA2AP08913 450 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 INPP1P49441 399 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 MNAT1P51948 309 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 CTBP2P56545 445 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 WNT4P56705 351 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 KRTAP10-9P60411 292 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 DEFA6Q01524 100 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 IFITM2Q01629 132 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 KRTAP1-1Q07627 177 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 PMAIP1Q13794 54 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 CDK10Q15131 360 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 UBE2SQ16763 222 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 MRPL2Q5T653 305 aaKnown RBP2.82□□□□□ -1.96
VPS13D-207ENST00000476169 EBLN2Q6P2I7 272 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 IGFL2Q6UWQ7 119 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 Q6ZRU5 148 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 TMEM86BQ8N661 226 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 CYB561D1Q8N8Q1 229 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 C15orf56Q8N910 161 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 OR51H1Q8NH63 302 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 CIRBP-AS1Q8TBR5 109 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 TEX47Q8TBZ9 253 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 HOPXQ9BPY8 73 aaPredicted RBP2.82□□□□□ -1.96
VPS13D-207ENST00000476169 MED18Q9BUE0 208 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 MS4A8Q9BY19 250 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 GTSF1LQ9H1H1 148 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 ENY2Q9NPA8 101 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 RWDD2AQ9UIY3 292 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 PKIGQ9Y2B9 76 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 ZNF318Q5VUA4 2279 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 C4BP0C0L5 1744 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 PKD1L3Q7Z443 1732 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 DOT1LQ8TEK3 1739 aa2.82□□□□□ -1.96
VPS13D-207ENST00000476169 DISC1C4P0D8 188 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 RBFOX2O43251 390 aaKnown RBP eCLIP2.81□□□□□ -1.96
VPS13D-207ENST00000476169 ZNF861PO60384 105 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 CST2P09228 141 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 GABRA3P34903 492 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 MPIP34949 423 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 TGFBR1P36897 503 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 OPRK1P41145 380 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 CXCL12P48061 93 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 MARCKSL1P49006 195 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 RPS24P62847 133 aaKnown RBP2.81□□□□□ -1.96
VPS13D-207ENST00000476169 HERVK_113P63121 156 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 IHHQ14623 411 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 ZNF79Q15937 498 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 DEFB116Q30KQ4 102 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 ACOT6Q3I5F7 207 aaPredicted RBP2.81□□□□□ -1.96
VPS13D-207ENST00000476169 ARHGAP11BQ3KRB8 267 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 LINC00303Q3SY05 128 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 HES3Q5TGS1 186 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 DHRS4L2Q6PKH6 230 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 ZNF567Q8N184 647 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 TBC1D19Q8N5T2 526 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 YIPF7Q8N8F6 280 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 OR9A2Q8NGT5 310 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 LINC01560Q8TB33 94 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 RASSF5Q8WWW0 418 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 ELSPBP1Q96BH3 223 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 L3HYPDHQ96EM0 354 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 ABHD14BQ96IU4 210 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 PPP1R2P1Q96PQ5 205 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 DCSTAMPQ9H295 470 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 KCNIP2Q9NS61 270 aa2.81□□□□□ -1.96
VPS13D-207ENST00000476169 ZNF355PQ9NSJ1 428 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms