RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 HES1Q14469 280 aa15.22■□□□□ 0.03
USP11-205ENST00000467378 HNF4GQ14541 408 aa15.22■□□□□ 0.03
USP11-205ENST00000467378 GLDNQ6ZMI3 551 aaPredicted RBP15.22■□□□□ 0.03
USP11-205ENST00000467378 Q6ZSV7 163 aa15.22■□□□□ 0.03
USP11-205ENST00000467378 ZNF645Q8N7E2 425 aa15.22■□□□□ 0.03
USP11-205ENST00000467378 OR2T10Q8NGZ9 312 aa15.22■□□□□ 0.03
USP11-205ENST00000467378 SLC25A33Q9BSK2 321 aa15.22■□□□□ 0.03
USP11-205ENST00000467378 RBMX2Q9Y388 322 aaKnown RBP15.22■□□□□ 0.03
USP11-205ENST00000467378 M0R1X1 148 aa15.21■□□□□ 0.03
USP11-205ENST00000467378 TSPAN9O75954 239 aa15.21■□□□□ 0.03
USP11-205ENST00000467378 PTBP1P26599 531 aaKnown RBP eCLIP15.21■□□□□ 0.03
USP11-205ENST00000467378 ETV6P41212 452 aa15.21■□□□□ 0.03
USP11-205ENST00000467378 LINC00205P59089 165 aa15.21■□□□□ 0.03
USP11-205ENST00000467378 C2orf68Q2NKX9 166 aa15.21■□□□□ 0.03
USP11-205ENST00000467378 CNPY1Q3B7I2 92 aa15.21■□□□□ 0.03
USP11-205ENST00000467378 ZNF383Q8NA42 475 aa15.21■□□□□ 0.03
USP11-205ENST00000467378 TMEM229BQ8NBD8 167 aa15.21■□□□□ 0.03
USP11-205ENST00000467378 DRAXINQ8NBI3 349 aaPredicted RBP15.21■□□□□ 0.03
USP11-205ENST00000467378 OR5AN1Q8NGI8 311 aa15.21■□□□□ 0.03
USP11-205ENST00000467378 MRAPQ8TCY5 172 aa15.21■□□□□ 0.03
USP11-205ENST00000467378 SLC22A5O76082 557 aa15.2■□□□□ 0.02
USP11-205ENST00000467378 MOSP00540 346 aa15.2■□□□□ 0.02
USP11-205ENST00000467378 CD3DP04234 171 aa15.2■□□□□ 0.02
USP11-205ENST00000467378 ZNF79Q15937 498 aa15.2■□□□□ 0.02
USP11-205ENST00000467378 ACTBL2Q562R1 376 aa15.2■□□□□ 0.02
USP11-205ENST00000467378 VAX1Q5SQQ9 334 aa15.2■□□□□ 0.02
USP11-205ENST00000467378 REC114Q7Z4M0 266 aa15.2■□□□□ 0.02
USP11-205ENST00000467378 LINC01006Q8NI28 216 aa15.2■□□□□ 0.02
USP11-205ENST00000467378 ZNF2Q9BSG1 426 aaPredicted RBP15.2■□□□□ 0.02
USP11-205ENST00000467378 C16orf95Q9H693 158 aa15.2■□□□□ 0.02
USP11-205ENST00000467378 ZNF107Q9UII5 783 aaPredicted RBP15.2■□□□□ 0.02
USP11-205ENST00000467378 OR5H14A6NHG9 310 aa15.19■□□□□ 0.02
USP11-205ENST00000467378 H0YJW9 148 aa15.19■□□□□ 0.02
USP11-205ENST00000467378 M0QYG6 137 aa15.19■□□□□ 0.02
USP11-205ENST00000467378 CD74P04233 296 aa15.19■□□□□ 0.02
USP11-205ENST00000467378 AMY1AP04745 511 aa15.19■□□□□ 0.02
USP11-205ENST00000467378 AMY2AP04746 511 aa15.19■□□□□ 0.02
USP11-205ENST00000467378 CSF1P09603 554 aa15.19■□□□□ 0.02
USP11-205ENST00000467378 MC5RP33032 325 aa15.19■□□□□ 0.02
USP11-205ENST00000467378 TAS2R19P59542 299 aa15.19■□□□□ 0.02
USP11-205ENST00000467378 BLCAPP62952 87 aa15.19■□□□□ 0.02
USP11-205ENST00000467378 OR6F1Q8NGZ6 308 aa15.19■□□□□ 0.02
USP11-205ENST00000467378 AKR1E2Q96JD6 320 aa15.19■□□□□ 0.02
USP11-205ENST00000467378 RITA1Q96K30 269 aa15.19■□□□□ 0.02
USP11-205ENST00000467378 TINAGL1Q9GZM7 467 aaPredicted RBP15.19■□□□□ 0.02
USP11-205ENST00000467378 NPFFR1Q9GZQ6 430 aa15.19■□□□□ 0.02
USP11-205ENST00000467378 RANBP3Q9H6Z4 567 aaPredicted RBP15.19■□□□□ 0.02
USP11-205ENST00000467378 CCL28Q9NRJ3 127 aa15.19■□□□□ 0.02
USP11-205ENST00000467378 PLSCR3Q9NRY6 295 aa15.19■□□□□ 0.02
USP11-205ENST00000467378 TBPP20226 339 aa15.18■□□□□ 0.02
USP11-205ENST00000467378 DUTP33316 252 aaKnown RBP15.18■□□□□ 0.02
USP11-205ENST00000467378 PROK1P58294 105 aa15.18■□□□□ 0.02
USP11-205ENST00000467378 FXYD4P59646 89 aa15.18■□□□□ 0.02
USP11-205ENST00000467378 EIF4EBP1Q13541 118 aaPredicted RBP15.18■□□□□ 0.02
USP11-205ENST00000467378 MSMO1Q15800 293 aa15.18■□□□□ 0.02
USP11-205ENST00000467378 PYDC2Q56P42 97 aa15.18■□□□□ 0.02
USP11-205ENST00000467378 SECTM1Q8WVN6 248 aa15.18■□□□□ 0.02
USP11-205ENST00000467378 MOB3AQ96BX8 217 aa15.18■□□□□ 0.02
USP11-205ENST00000467378 THAP7Q9BT49 309 aaPredicted RBP15.18■□□□□ 0.02
USP11-205ENST00000467378 ZNF702PQ9H963 129 aa15.18■□□□□ 0.02
USP11-205ENST00000467378 MOB4Q9Y3A3 225 aa15.18■□□□□ 0.02
USP11-205ENST00000467378 LINC00473A8K010 186 aa15.17■□□□□ 0.02
USP11-205ENST00000467378 THBS3P49746 956 aa15.17■□□□□ 0.02
USP11-205ENST00000467378 F2RL1P55085 397 aa15.17■□□□□ 0.02
USP11-205ENST00000467378 HERV-K104P61576 105 aa15.17■□□□□ 0.02
USP11-205ENST00000467378 TSPAN5P62079 268 aa15.17■□□□□ 0.02
USP11-205ENST00000467378 RNASE10Q5GAN6 216 aaKnown RBP15.17■□□□□ 0.02
USP11-205ENST00000467378 SPANXN2Q5MJ10 180 aa15.17■□□□□ 0.02
USP11-205ENST00000467378 KPRPQ5T749 579 aaPredicted RBP15.17■□□□□ 0.02
USP11-205ENST00000467378 C11orf88Q6PI97 169 aa15.17■□□□□ 0.02
USP11-205ENST00000467378 Q6ZS46 218 aa15.17■□□□□ 0.02
USP11-205ENST00000467378 Q8N2B8 174 aa15.17■□□□□ 0.02
USP11-205ENST00000467378 C5orf56Q8N8D9 126 aa15.17■□□□□ 0.02
USP11-205ENST00000467378 DDB2Q92466 427 aa15.17■□□□□ 0.02
USP11-205ENST00000467378 SLC5A7Q9GZV3 580 aa15.17■□□□□ 0.02
USP11-205ENST00000467378 TAS2R8Q9NYW2 309 aa15.17■□□□□ 0.02
USP11-205ENST00000467378 WASHC3Q9Y3C0 194 aa15.17■□□□□ 0.02
USP11-205ENST00000467378 ANKRD20A5PA0PJZ0 165 aa15.16■□□□□ 0.02
USP11-205ENST00000467378 M0QZK8 103 aa15.16■□□□□ 0.02
USP11-205ENST00000467378 FGF16O43320 207 aa15.16■□□□□ 0.02
USP11-205ENST00000467378 STEAP1BQ6NZ63 245 aa15.16■□□□□ 0.02
USP11-205ENST00000467378 Q8N402 240 aa15.16■□□□□ 0.02
USP11-205ENST00000467378 Q8N9W7 124 aa15.16■□□□□ 0.02
USP11-205ENST00000467378 ZBTB34Q8NCN2 500 aa15.16■□□□□ 0.02
USP11-205ENST00000467378 OR8H1Q8NGG4 311 aa15.16■□□□□ 0.02
USP11-205ENST00000467378 OR4D10Q8NGI6 311 aa15.16■□□□□ 0.02
USP11-205ENST00000467378 OR4C13Q8NGP0 309 aa15.16■□□□□ 0.02
USP11-205ENST00000467378 ADTRPQ96IZ2 230 aa15.16■□□□□ 0.02
USP11-205ENST00000467378 PRSS22Q9GZN4 317 aa15.16■□□□□ 0.02
USP11-205ENST00000467378 SRRQ9GZT4 340 aa15.16■□□□□ 0.02
USP11-205ENST00000467378 FXYD6Q9H0Q3 95 aa15.16■□□□□ 0.02
USP11-205ENST00000467378 H7C2Y5 167 aa15.15■□□□□ 0.02
USP11-205ENST00000467378 RAB3DO95716 219 aa15.15■□□□□ 0.02
USP11-205ENST00000467378 APOA2P02652 100 aa15.15■□□□□ 0.02
USP11-205ENST00000467378 IFNA6P05013 189 aa15.15■□□□□ 0.02
USP11-205ENST00000467378 ZNF735P0CB33 412 aa15.15■□□□□ 0.02
USP11-205ENST00000467378 CNTFRP26992 372 aa15.15■□□□□ 0.02
USP11-205ENST00000467378 GNRHRP30968 328 aa15.15■□□□□ 0.02
USP11-205ENST00000467378 RPL30P62888 115 aaKnown RBP15.15■□□□□ 0.02
USP11-205ENST00000467378 TAGLNQ01995 201 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms