RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 TRDCB7Z8K6 153 aa17.45■□□□□ 0.38
USP42-205ENST00000465073 CASQ2O14958 399 aaPredicted RBP17.45■□□□□ 0.38
USP42-205ENST00000465073 CNIH1O95406 144 aa17.45■□□□□ 0.38
USP42-205ENST00000465073 UFD1Q92890 307 aa17.45■□□□□ 0.38
USP42-205ENST00000465073 ARHGAP5-AS1Q96IT6 56 aa17.45■□□□□ 0.38
USP42-205ENST00000465073 GFI1Q99684 422 aa17.45■□□□□ 0.38
USP42-205ENST00000465073 CMSS1Q9BQ75 279 aaKnown RBP17.45■□□□□ 0.38
USP42-205ENST00000465073 RSRP1Q9BUV0 290 aa17.45■□□□□ 0.38
USP42-205ENST00000465073 PECRQ9BY49 303 aa17.45■□□□□ 0.38
USP42-205ENST00000465073 SCN3BQ9NY72 215 aa17.45■□□□□ 0.38
USP42-205ENST00000465073 RDH8Q9NYR8 311 aa17.45■□□□□ 0.38
USP42-205ENST00000465073 M0R1X1 148 aa17.44■□□□□ 0.38
USP42-205ENST00000465073 LGALS7P47929 136 aa17.44■□□□□ 0.38
USP42-205ENST00000465073 SERPINB10P48595 397 aa17.44■□□□□ 0.38
USP42-205ENST00000465073 VEGFCP49767 419 aa17.44■□□□□ 0.38
USP42-205ENST00000465073 RAB11BQ15907 218 aa17.44■□□□□ 0.38
USP42-205ENST00000465073 LIPKQ5VXJ0 399 aa17.44■□□□□ 0.38
USP42-205ENST00000465073 HAPLN4Q86UW8 402 aa17.44■□□□□ 0.38
USP42-205ENST00000465073 OR5T1Q8NG75 326 aa17.44■□□□□ 0.38
USP42-205ENST00000465073 TMEM68Q96MH6 324 aa17.44■□□□□ 0.38
USP42-205ENST00000465073 VCXQ9H320 206 aa17.44■□□□□ 0.38
USP42-205ENST00000465073 SLC35D1Q9NTN3 355 aa17.44■□□□□ 0.38
USP42-205ENST00000465073 C19orf73Q9NVV2 129 aa17.44■□□□□ 0.38
USP42-205ENST00000465073 RANBP1P43487 201 aa17.44■□□□□ 0.38
USP42-205ENST00000465073 KLF5Q13887 457 aaPredicted RBP17.44■□□□□ 0.38
USP42-205ENST00000465073 TMEM91Q6ZNR0 172 aa17.44■□□□□ 0.38
USP42-205ENST00000465073 SGPP2Q8IWX5 399 aa17.44■□□□□ 0.38
USP42-205ENST00000465073 OR56B1Q8NGI3 324 aa17.44■□□□□ 0.38
USP42-205ENST00000465073 AK6Q9Y3D8 172 aaKnown RBP17.44■□□□□ 0.38
USP42-205ENST00000465073 ARL6IP5O75915 188 aa17.43■□□□□ 0.38
USP42-205ENST00000465073 TPBGQ13641 420 aa17.43■□□□□ 0.38
USP42-205ENST00000465073 IRF3Q14653 427 aa17.43■□□□□ 0.38
USP42-205ENST00000465073 TRAM1Q15629 374 aa17.43■□□□□ 0.38
USP42-205ENST00000465073 OR4A4PQ8NGN8 299 aa17.43■□□□□ 0.38
USP42-205ENST00000465073 ANKRD34BA5PLL1 514 aa17.42■□□□□ 0.38
USP42-205ENST00000465073 BRI3O95415 125 aa17.42■□□□□ 0.38
USP42-205ENST00000465073 IGLV2-23P01705 113 aa17.42■□□□□ 0.38
USP42-205ENST00000465073 SSBP2P81877 361 aaPredicted RBP17.42■□□□□ 0.38
USP42-205ENST00000465073 FAM3DQ96BQ1 224 aa17.42■□□□□ 0.38
USP42-205ENST00000465073 H0Y980 276 aa17.41■□□□□ 0.38
USP42-205ENST00000465073 CRYGBP07316 175 aa17.41■□□□□ 0.38
USP42-205ENST00000465073 AADACP22760 399 aa17.41■□□□□ 0.38
USP42-205ENST00000465073 PSMA1P25786 263 aaKnown RBP17.41■□□□□ 0.38
USP42-205ENST00000465073 TAGLNQ01995 201 aaKnown RBP17.41■□□□□ 0.38
USP42-205ENST00000465073 PJVKQ0ZLH3 352 aa17.41■□□□□ 0.38
USP42-205ENST00000465073 C2orf76Q3KRA6 126 aa17.41■□□□□ 0.38
USP42-205ENST00000465073 PLAC9Q5JTB6 97 aa17.41■□□□□ 0.38
USP42-205ENST00000465073 OR9G4Q8NGQ1 327 aa17.41■□□□□ 0.38
USP42-205ENST00000465073 DNAH7Q8WXX0 4024 aa17.41■□□□□ 0.38
USP42-205ENST00000465073 CLDN12P56749 244 aa17.4■□□□□ 0.38
USP42-205ENST00000465073 MRPS15P82914 257 aaKnown RBP17.4■□□□□ 0.38
USP42-205ENST00000465073 CBX3Q13185 183 aa17.4■□□□□ 0.38
USP42-205ENST00000465073 TINAGL1Q9GZM7 467 aaPredicted RBP17.4■□□□□ 0.38
USP42-205ENST00000465073 DYNC2H1Q8NCM8 4307 aaKnown RBP17.39■□□□□ 0.38
USP42-205ENST00000465073 LCE6AA0A183 80 aa17.39■□□□□ 0.37
USP42-205ENST00000465073 FABP7O15540 132 aa17.39■□□□□ 0.37
USP42-205ENST00000465073 DENRO43583 198 aaKnown RBP17.39■□□□□ 0.37
USP42-205ENST00000465073 HSMCR30P0CW71 290 aa17.39■□□□□ 0.37
USP42-205ENST00000465073 RPS25P62851 125 aaKnown RBP17.39■□□□□ 0.37
USP42-205ENST00000465073 IL34Q6ZMJ4 242 aa17.39■□□□□ 0.37
USP42-205ENST00000465073 OR10J5Q8NHC4 309 aa17.39■□□□□ 0.37
USP42-205ENST00000465073 ISOC1Q96CN7 298 aa17.39■□□□□ 0.37
USP42-205ENST00000465073 HARBI1Q96MB7 349 aa17.39■□□□□ 0.37
USP42-205ENST00000465073 OR2D2Q9H210 308 aa17.39■□□□□ 0.37
USP42-205ENST00000465073 TPRKBQ9Y3C4 175 aa17.39■□□□□ 0.37
USP42-205ENST00000465073 RYR2Q92736 4967 aa17.39■□□□□ 0.37
USP42-205ENST00000465073 DIRAS3O95661 229 aa17.38■□□□□ 0.37
USP42-205ENST00000465073 CD3GP09693 182 aa17.38■□□□□ 0.37
USP42-205ENST00000465073 PSMD7P51665 324 aa17.38■□□□□ 0.37
USP42-205ENST00000465073 SYNJ2BPP57105 145 aa17.38■□□□□ 0.37
USP42-205ENST00000465073 TATDN3Q17R31 274 aa17.38■□□□□ 0.37
USP42-205ENST00000465073 ZNF343Q6P1L6 599 aa17.38■□□□□ 0.37
USP42-205ENST00000465073 USMG5Q96IX5 58 aa17.38■□□□□ 0.37
USP42-205ENST00000465073 EDA2RQ9HAV5 297 aa17.38■□□□□ 0.37
USP42-205ENST00000465073 SDHAF2Q9NX18 166 aa17.38■□□□□ 0.37
USP42-205ENST00000465073 PEF1Q9UBV8 284 aaKnown RBP17.38■□□□□ 0.37
USP42-205ENST00000465073 RAB22AQ9UL26 194 aa17.38■□□□□ 0.37
USP42-205ENST00000465073 V9GY05 133 aa17.38■□□□□ 0.37
USP42-205ENST00000465073 BET1O15155 118 aa17.37■□□□□ 0.37
USP42-205ENST00000465073 CALRP27797 417 aaKnown RBP17.37■□□□□ 0.37
USP42-205ENST00000465073 RTL8BQ17RB0 113 aa17.37■□□□□ 0.37
USP42-205ENST00000465073 TMEM177Q53S58 311 aa17.37■□□□□ 0.37
USP42-205ENST00000465073 ZFAND6Q6FIF0 208 aa17.37■□□□□ 0.37
USP42-205ENST00000465073 RAB3CQ96E17 227 aa17.37■□□□□ 0.37
USP42-205ENST00000465073 CABLES2Q9BTV7 478 aa17.37■□□□□ 0.37
USP42-205ENST00000465073 DUSP21Q9H596 190 aa17.37■□□□□ 0.37
USP42-205ENST00000465073 KCNK7Q9Y2U2 307 aa17.37■□□□□ 0.37
USP42-205ENST00000465073 TRBV6-7A0A0A0MS04 114 aa17.37■□□□□ 0.37
USP42-205ENST00000465073 SHOXO15266 292 aa17.37■□□□□ 0.37
USP42-205ENST00000465073 RRASP10301 218 aa17.37■□□□□ 0.37
USP42-205ENST00000465073 IGSF11Q5DX21 431 aa17.37■□□□□ 0.37
USP42-205ENST00000465073 SPATA25Q9BR10 227 aa17.37■□□□□ 0.37
USP42-205ENST00000465073 SIGLEC8Q9NYZ4 499 aa17.37■□□□□ 0.37
USP42-205ENST00000465073 TMEM272A0A1B0GTI8 110 aa17.36■□□□□ 0.37
USP42-205ENST00000465073 ERICH4A6NGS2 130 aa17.36■□□□□ 0.37
USP42-205ENST00000465073 FCGR3AP08637 254 aa17.36■□□□□ 0.37
USP42-205ENST00000465073 MLLT11Q13015 90 aaPredicted RBP17.36■□□□□ 0.37
USP42-205ENST00000465073 BVESQ8NE79 360 aa17.36■□□□□ 0.37
USP42-205ENST00000465073 COA4Q9NYJ1 87 aa17.36■□□□□ 0.37
USP42-205ENST00000465073 SRRM4A7MD48 611 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms