RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 TRBV12-3P01733 135 aa13.1□□□□□ -0.31
HMGN1-209ENST00000463631 CRYGBP07316 175 aa13.1□□□□□ -0.31
HMGN1-209ENST00000463631 WNT4P56705 351 aa13.1□□□□□ -0.31
HMGN1-209ENST00000463631 QRFPP83859 136 aa13.1□□□□□ -0.31
HMGN1-209ENST00000463631 PJVKQ0ZLH3 352 aa13.1□□□□□ -0.31
HMGN1-209ENST00000463631 TATDN3Q17R31 274 aa13.1□□□□□ -0.31
HMGN1-209ENST00000463631 TTC23Q5W5X9 447 aa13.1□□□□□ -0.31
HMGN1-209ENST00000463631 GLT8D1Q68CQ7 371 aa13.1□□□□□ -0.31
HMGN1-209ENST00000463631 BVESQ8NE79 360 aa13.1□□□□□ -0.31
HMGN1-209ENST00000463631 SETD6Q8TBK2 473 aa13.1□□□□□ -0.31
HMGN1-209ENST00000463631 GGHQ92820 318 aa13.1□□□□□ -0.31
HMGN1-209ENST00000463631 S100A14Q9HCY8 104 aa13.1□□□□□ -0.31
HMGN1-209ENST00000463631 C12orf4Q9NQ89 552 aa13.1□□□□□ -0.31
HMGN1-209ENST00000463631 PLEKHJ1Q9NW61 149 aa13.1□□□□□ -0.31
HMGN1-209ENST00000463631 ADAM30Q9UKF2 790 aa13.1□□□□□ -0.31
HMGN1-209ENST00000463631 A0A0A6YYD4 124 aa13.09□□□□□ -0.31
HMGN1-209ENST00000463631 AIREO43918 545 aa13.09□□□□□ -0.31
HMGN1-209ENST00000463631 CD37P11049 281 aa13.09□□□□□ -0.31
HMGN1-209ENST00000463631 LGALS7P47929 136 aa13.09□□□□□ -0.31
HMGN1-209ENST00000463631 LINC00205P59089 165 aa13.09□□□□□ -0.31
HMGN1-209ENST00000463631 RPEL1Q2QD12 228 aa13.09□□□□□ -0.31
HMGN1-209ENST00000463631 LRRTM1Q86UE6 522 aa13.09□□□□□ -0.31
HMGN1-209ENST00000463631 SETD9Q8NE22 299 aa13.09□□□□□ -0.31
HMGN1-209ENST00000463631 FAM110AQ9BQ89 295 aa13.09□□□□□ -0.31
HMGN1-209ENST00000463631 PLEKHA3Q9HB20 300 aa13.09□□□□□ -0.31
HMGN1-209ENST00000463631 PEMTQ9UBM1 199 aa13.09□□□□□ -0.31
HMGN1-209ENST00000463631 AK3Q9UIJ7 227 aa13.09□□□□□ -0.31
HMGN1-209ENST00000463631 MYL12BO14950 172 aa13.08□□□□□ -0.32
HMGN1-209ENST00000463631 BPNT1O95861 308 aa13.08□□□□□ -0.32
HMGN1-209ENST00000463631 CD81P60033 236 aa13.08□□□□□ -0.32
HMGN1-209ENST00000463631 FAM89BQ8N5H3 189 aa13.08□□□□□ -0.32
HMGN1-209ENST00000463631 SNAPC3Q92966 411 aa13.08□□□□□ -0.32
HMGN1-209ENST00000463631 HDHD3Q9BSH5 251 aaPredicted RBP13.08□□□□□ -0.32
HMGN1-209ENST00000463631 LPAR5Q9H1C0 372 aa13.08□□□□□ -0.32
HMGN1-209ENST00000463631 KCNK15Q9H427 330 aa13.08□□□□□ -0.32
HMGN1-209ENST00000463631 Q9N2K0 584 aa13.08□□□□□ -0.32
HMGN1-209ENST00000463631 SLC35D1Q9NTN3 355 aa13.08□□□□□ -0.32
HMGN1-209ENST00000463631 HSF4Q9ULV5 492 aa13.08□□□□□ -0.32
HMGN1-209ENST00000463631 A0A0B4J203 849 aa13.07□□□□□ -0.32
HMGN1-209ENST00000463631 IGKV1-6A0A0C4DH72 117 aa13.07□□□□□ -0.32
HMGN1-209ENST00000463631 FOXI3A8MTJ6 420 aaPredicted RBP13.07□□□□□ -0.32
HMGN1-209ENST00000463631 M0R1X1 148 aa13.07□□□□□ -0.32
HMGN1-209ENST00000463631 RBMXL2O75526 392 aaKnown RBP13.07□□□□□ -0.32
HMGN1-209ENST00000463631 TPPPO94811 219 aa13.07□□□□□ -0.32
HMGN1-209ENST00000463631 SCTP09683 121 aa13.07□□□□□ -0.32
HMGN1-209ENST00000463631 SRMP19623 302 aa13.07□□□□□ -0.32
HMGN1-209ENST00000463631 DEFA5Q01523 94 aa13.07□□□□□ -0.32
HMGN1-209ENST00000463631 INSL4Q14641 139 aa13.07□□□□□ -0.32
HMGN1-209ENST00000463631 MS4A15Q8N5U1 240 aa13.07□□□□□ -0.32
HMGN1-209ENST00000463631 ADAD2Q8NCV1 583 aaKnown RBP13.07□□□□□ -0.32
HMGN1-209ENST00000463631 OR6M1Q8NGM8 313 aa13.07□□□□□ -0.32
HMGN1-209ENST00000463631 HARBI1Q96MB7 349 aa13.07□□□□□ -0.32
HMGN1-209ENST00000463631 NEURL2Q9BR09 285 aa13.07□□□□□ -0.32
HMGN1-209ENST00000463631 COA4Q9NYJ1 87 aa13.07□□□□□ -0.32
HMGN1-209ENST00000463631 RDH8Q9NYR8 311 aa13.07□□□□□ -0.32
HMGN1-209ENST00000463631 TAGLNQ01995 201 aaKnown RBP13.06□□□□□ -0.32
HMGN1-209ENST00000463631 ACSM3Q53FZ2 586 aa13.06□□□□□ -0.32
HMGN1-209ENST00000463631 TMEM177Q53S58 311 aa13.06□□□□□ -0.32
HMGN1-209ENST00000463631 RBM48Q5RL73 367 aaKnown RBP13.06□□□□□ -0.32
HMGN1-209ENST00000463631 RNLSQ5VYX0 342 aa13.06□□□□□ -0.32
HMGN1-209ENST00000463631 URM1Q9BTM9 101 aaKnown RBP13.06□□□□□ -0.32
HMGN1-209ENST00000463631 SLC2A8Q9NY64 477 aa13.06□□□□□ -0.32
HMGN1-209ENST00000463631 RBMY1BA6NDE4 496 aaKnown RBP13.05□□□□□ -0.32
HMGN1-209ENST00000463631 RBMY1EA6NEQ0 496 aaKnown RBP13.05□□□□□ -0.32
HMGN1-209ENST00000463631 FAM223BA6NKX1 122 aa13.05□□□□□ -0.32
HMGN1-209ENST00000463631 BMPR1BO00238 502 aa13.05□□□□□ -0.32
HMGN1-209ENST00000463631 SOCS1O15524 211 aa13.05□□□□□ -0.32
HMGN1-209ENST00000463631 RBMY1DP0C7P1 496 aaKnown RBP13.05□□□□□ -0.32
HMGN1-209ENST00000463631 SERPINB10P48595 397 aa13.05□□□□□ -0.32
HMGN1-209ENST00000463631 MRGPRG-AS1Q2M3A8 158 aa13.05□□□□□ -0.32
HMGN1-209ENST00000463631 CD300EQ496F6 205 aaPredicted RBP13.05□□□□□ -0.32
HMGN1-209ENST00000463631 FAM223AQ8IWN6 122 aa13.05□□□□□ -0.32
HMGN1-209ENST00000463631 NANOGP1Q8N7R0 232 aa13.05□□□□□ -0.32
HMGN1-209ENST00000463631 CYGBQ8WWM9 190 aa13.05□□□□□ -0.32
HMGN1-209ENST00000463631 LINC00476Q8WZB0 136 aa13.05□□□□□ -0.32
HMGN1-209ENST00000463631 ZC4H2Q9NQZ6 224 aa13.05□□□□□ -0.32
HMGN1-209ENST00000463631 ZNF230Q9UIE0 474 aaPredicted RBP13.05□□□□□ -0.32
HMGN1-209ENST00000463631 PSORS1C1Q9UIG5 152 aa13.05□□□□□ -0.32
HMGN1-209ENST00000463631 ZNF785A8K8V0 405 aa13.04□□□□□ -0.32
HMGN1-209ENST00000463631 OR9G9P0C7N8 305 aa13.04□□□□□ -0.32
HMGN1-209ENST00000463631 LAIR2Q6ISS4 152 aa13.04□□□□□ -0.32
HMGN1-209ENST00000463631 AHSA2Q719I0 299 aa13.04□□□□□ -0.32
HMGN1-209ENST00000463631 PLCXD1Q9NUJ7 323 aa13.04□□□□□ -0.32
HMGN1-209ENST00000463631 TRBV9A0A0B4J1U6 114 aa13.03□□□□□ -0.32
HMGN1-209ENST00000463631 TRDCB7Z8K6 153 aa13.03□□□□□ -0.32
HMGN1-209ENST00000463631 DIRAS3O95661 229 aa13.03□□□□□ -0.32
HMGN1-209ENST00000463631 CD7P09564 240 aa13.03□□□□□ -0.32
HMGN1-209ENST00000463631 RHOGP84095 191 aa13.03□□□□□ -0.32
HMGN1-209ENST00000463631 CBX3Q13185 183 aa13.03□□□□□ -0.32
HMGN1-209ENST00000463631 EXOSC2Q13868 293 aaKnown RBP13.03□□□□□ -0.32
HMGN1-209ENST00000463631 RTL8BQ17RB0 113 aa13.03□□□□□ -0.32
HMGN1-209ENST00000463631 FAM209BQ5JX69 171 aa13.03□□□□□ -0.32
HMGN1-209ENST00000463631 DEFB125Q8N687 156 aa13.03□□□□□ -0.32
HMGN1-209ENST00000463631 OR4A4PQ8NGN8 299 aa13.03□□□□□ -0.32
HMGN1-209ENST00000463631 OR2D2Q9H210 308 aa13.03□□□□□ -0.32
HMGN1-209ENST00000463631 SRD5A3Q9H8P0 318 aa13.03□□□□□ -0.32
HMGN1-209ENST00000463631 AKIP1Q9NQ31 210 aa13.03□□□□□ -0.32
HMGN1-209ENST00000463631 C8orf4Q9NR00 106 aa13.03□□□□□ -0.32
HMGN1-209ENST00000463631 FKBP14Q9NWM8 211 aa13.03□□□□□ -0.32
HMGN1-209ENST00000463631 SDHAF2Q9NX18 166 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms