RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 IGKV1-33P01594 117 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 IGHV4-59P01825 116 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 CTSDP07339 412 aaPredicted RBP8.18□□□□□ -1.1
UPF2-204ENST00000460569 SNRNP70P08621 437 aaKnown RBP8.18□□□□□ -1.1
UPF2-204ENST00000460569 CD24P25063 80 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 DYNLT3P51808 116 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 HES1Q14469 280 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 LY6EQ16553 131 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 AANATQ16613 207 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 TUSC1Q2TAM9 212 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 OR2B11Q5JQS5 317 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 ZNF66Q6ZN08 573 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 CCDC71LQ8N9Z2 235 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 ZNF383Q8NA42 475 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 POC5Q8NA72 575 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 OR51H1Q8NH63 302 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 ENKURQ8TC29 256 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 SSMEM1Q8WWF3 244 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 ZNF486Q96H40 463 aaPredicted RBP8.18□□□□□ -1.1
UPF2-204ENST00000460569 SLC25A21Q9BQT8 299 aaPredicted RBP8.18□□□□□ -1.1
UPF2-204ENST00000460569 DPAGT1Q9H3H5 408 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 PRDM13Q9H4Q3 707 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 SLC2A9Q9NRM0 540 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 SLC35D1Q9NTN3 355 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 COPZ2Q9P299 210 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 VSIG4Q9Y279 399 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 MXRA5Q9NR99 2828 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 FAM240BA0A1B0GVZ2 78 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 DNAJC9-AS1A6NH13 148 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 NDUFB6O95139 128 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 VENTXO95231 258 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 FAM106CPP0CH98 169 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 CD1BP29016 333 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 MC5RP33032 325 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 IER3P46695 156 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 PIGPP57054 158 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 RPL30P62888 115 aaKnown RBP8.17□□□□□ -1.1
UPF2-204ENST00000460569 CBX3Q13185 183 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 EIF4EBP1Q13541 118 aaPredicted RBP8.17□□□□□ -1.1
UPF2-204ENST00000460569 DCTN2Q13561 401 aaKnown RBP8.17□□□□□ -1.1
UPF2-204ENST00000460569 HABP2Q14520 560 aaPredicted RBP8.17□□□□□ -1.1
UPF2-204ENST00000460569 RTL8BQ17RB0 113 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 TMED4Q7Z7H5 227 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 TBC1D26Q86UD7 250 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 ZDHHC22Q8N966 263 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 OR5AN1Q8NGI8 311 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 OR5R1Q8NH85 324 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 RBMXL1Q96E39 390 aaKnown RBP8.17□□□□□ -1.1
UPF2-204ENST00000460569 DUX5Q96PT3 197 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 C5orf66Q9H5L9 145 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 PALMDQ9NP74 551 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 LIN7CQ9NUP9 197 aaKnown RBP8.17□□□□□ -1.1
UPF2-204ENST00000460569 GPR132Q9UNW8 380 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 PRELID3BQ9Y3B1 194 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 WASHC3Q9Y3C0 194 aa8.17□□□□□ -1.1
UPF2-204ENST00000460569 ANK3Q12955 4377 aaKnown RBP8.16□□□□□ -1.1
UPF2-204ENST00000460569 FAM90A9PA6NNJ1 464 aa8.16□□□□□ -1.1
UPF2-204ENST00000460569 FCGR3BO75015 233 aa8.16□□□□□ -1.1
UPF2-204ENST00000460569 PGLYRP1O75594 196 aaPredicted RBP8.16□□□□□ -1.1
UPF2-204ENST00000460569 TMEM11P17152 192 aa8.16□□□□□ -1.1
UPF2-204ENST00000460569 SLC6A1P30531 599 aa8.16□□□□□ -1.1
UPF2-204ENST00000460569 HILS1P60008 231 aa8.16□□□□□ -1.1
UPF2-204ENST00000460569 RND3P61587 244 aa8.16□□□□□ -1.1
UPF2-204ENST00000460569 TAGLNQ01995 201 aaKnown RBP8.16□□□□□ -1.1
UPF2-204ENST00000460569 HNF4GQ14541 408 aa8.16□□□□□ -1.1
UPF2-204ENST00000460569 FBLN7Q53RD9 439 aa8.16□□□□□ -1.1
UPF2-204ENST00000460569 TMEM219Q86XT9 240 aa8.16□□□□□ -1.1
UPF2-204ENST00000460569 PDPNQ86YL7 162 aa8.16□□□□□ -1.1
UPF2-204ENST00000460569 CENPSQ8N2Z9 138 aa8.16□□□□□ -1.1
UPF2-204ENST00000460569 TMEM86BQ8N661 226 aa8.16□□□□□ -1.1
UPF2-204ENST00000460569 OR2T10Q8NGZ9 312 aa8.16□□□□□ -1.1
UPF2-204ENST00000460569 PIFOQ8TCI5 191 aa8.16□□□□□ -1.1
UPF2-204ENST00000460569 DDB2Q92466 427 aa8.16□□□□□ -1.1
UPF2-204ENST00000460569 EAF1Q96JC9 268 aaPredicted RBP8.16□□□□□ -1.1
UPF2-204ENST00000460569 JMJD8Q96S16 334 aa8.16□□□□□ -1.1
UPF2-204ENST00000460569 RTBDNQ9BSG5 229 aaPredicted RBP8.16□□□□□ -1.1
UPF2-204ENST00000460569 C20orf85Q9H1P6 137 aa8.16□□□□□ -1.1
UPF2-204ENST00000460569 ESM1Q9NQ30 184 aa8.16□□□□□ -1.1
UPF2-204ENST00000460569 PITPNC1Q9UKF7 332 aa8.16□□□□□ -1.1
UPF2-204ENST00000460569 VPREB3Q9UKI3 123 aa8.16□□□□□ -1.1
UPF2-204ENST00000460569 TCF19Q9Y242 345 aa8.16□□□□□ -1.1
UPF2-204ENST00000460569 POMT1Q9Y6A1 747 aa8.16□□□□□ -1.1
UPF2-204ENST00000460569 TEX13DA0A0J9YY54 714 aaPredicted RBP8.15□□□□□ -1.1
UPF2-204ENST00000460569 A6NDX4 124 aa8.15□□□□□ -1.1
UPF2-204ENST00000460569 ARPC1BO15143 372 aaKnown RBP8.15□□□□□ -1.1
UPF2-204ENST00000460569 MPPED1O15442 326 aa8.15□□□□□ -1.1
UPF2-204ENST00000460569 TCF21O43680 179 aa8.15□□□□□ -1.1
UPF2-204ENST00000460569 PEX14O75381 377 aa8.15□□□□□ -1.1
UPF2-204ENST00000460569 CRYZL1O95825 349 aa8.15□□□□□ -1.1
UPF2-204ENST00000460569 MOSP00540 346 aa8.15□□□□□ -1.1
UPF2-204ENST00000460569 IGKV1-16P04430 117 aa8.15□□□□□ -1.1
UPF2-204ENST00000460569 TCRBP04435 133 aa8.15□□□□□ -1.1
UPF2-204ENST00000460569 RRASP10301 218 aa8.15□□□□□ -1.1
UPF2-204ENST00000460569 AKR1C4P17516 323 aa8.15□□□□□ -1.1
UPF2-204ENST00000460569 F2RP25116 425 aa8.15□□□□□ -1.1
UPF2-204ENST00000460569 KIR2DS2P43631 304 aa8.15□□□□□ -1.1
UPF2-204ENST00000460569 SLC9A3R2Q15599 337 aa8.15□□□□□ -1.1
UPF2-204ENST00000460569 DHRS7BQ6IAN0 325 aaPredicted RBP8.15□□□□□ -1.1
UPF2-204ENST00000460569 NRARPQ7Z6K4 114 aa8.15□□□□□ -1.1
UPF2-204ENST00000460569 THNSL2Q86YJ6 484 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms