RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 RBPMSQ93062 196 aaKnown RBP12.93□□□□□ -0.34
MCF2L-217ENST00000441756 LHX4Q969G2 390 aa12.93□□□□□ -0.34
MCF2L-217ENST00000441756 ST6GALNAC6Q969X2 333 aa12.93□□□□□ -0.34
MCF2L-217ENST00000441756 MSI2Q96DH6 328 aaKnown RBP12.93□□□□□ -0.34
MCF2L-217ENST00000441756 TMEM56Q96MV1 263 aa12.93□□□□□ -0.34
MCF2L-217ENST00000441756 C7orf69Q9H7B7 122 aa12.93□□□□□ -0.34
MCF2L-217ENST00000441756 ZNRD1Q9P1U0 126 aa12.93□□□□□ -0.34
MCF2L-217ENST00000441756 TMEM56-RWDD3S4R434 201 aa12.93□□□□□ -0.34
MCF2L-217ENST00000441756 UNC79Q9P2D8 2635 aa12.93□□□□□ -0.34
MCF2L-217ENST00000441756 HECTD1Q9ULT8 2610 aa12.93□□□□□ -0.34
MCF2L-217ENST00000441756 DBX1A6NMT0 343 aa12.92□□□□□ -0.34
MCF2L-217ENST00000441756 GOSR2O14653 212 aa12.92□□□□□ -0.34
MCF2L-217ENST00000441756 CDS2O95674 445 aa12.92□□□□□ -0.34
MCF2L-217ENST00000441756 RAB13P51153 203 aa12.92□□□□□ -0.34
MCF2L-217ENST00000441756 RPL30P62888 115 aaKnown RBP12.92□□□□□ -0.34
MCF2L-217ENST00000441756 FCN2Q15485 313 aa12.92□□□□□ -0.34
MCF2L-217ENST00000441756 MIDNQ504T8 468 aa12.92□□□□□ -0.34
MCF2L-217ENST00000441756 TPTE2P1Q5T6R2 138 aa12.92□□□□□ -0.34
MCF2L-217ENST00000441756 GPR157Q5UAW9 335 aa12.92□□□□□ -0.34
MCF2L-217ENST00000441756 TMEM268Q5VZI3 342 aa12.92□□□□□ -0.34
MCF2L-217ENST00000441756 HCP5Q6MZN7 132 aa12.92□□□□□ -0.34
MCF2L-217ENST00000441756 CCDC144NLQ6NUI1 221 aa12.92□□□□□ -0.34
MCF2L-217ENST00000441756 GPHA2Q96T91 129 aa12.92□□□□□ -0.34
MCF2L-217ENST00000441756 COMMD9Q9P000 198 aa12.92□□□□□ -0.34
MCF2L-217ENST00000441756 TMED3Q9Y3Q3 217 aa12.92□□□□□ -0.34
MCF2L-217ENST00000441756 CENPEQ02224 2701 aa12.92□□□□□ -0.34
MCF2L-217ENST00000441756 APCP25054 2843 aa12.92□□□□□ -0.34
MCF2L-217ENST00000441756 CELSR2Q9HCU4 2923 aa12.92□□□□□ -0.34
MCF2L-217ENST00000441756 POLQO75417 2590 aa12.91□□□□□ -0.34
MCF2L-217ENST00000441756 LINC00473A8K010 186 aa12.91□□□□□ -0.34
MCF2L-217ENST00000441756 CYSRT1A8MQ03 144 aa12.91□□□□□ -0.34
MCF2L-217ENST00000441756 PROP1O75360 226 aa12.91□□□□□ -0.34
MCF2L-217ENST00000441756 HLA-GP17693 338 aa12.91□□□□□ -0.34
MCF2L-217ENST00000441756 MC5RP33032 325 aa12.91□□□□□ -0.34
MCF2L-217ENST00000441756 DLX1P56177 255 aa12.91□□□□□ -0.34
MCF2L-217ENST00000441756 GSG1LQ6UXU4 331 aa12.91□□□□□ -0.34
MCF2L-217ENST00000441756 OR8H3Q8N146 312 aa12.91□□□□□ -0.34
MCF2L-217ENST00000441756 TEX29Q8N6K0 151 aa12.91□□□□□ -0.34
MCF2L-217ENST00000441756 RNASE11Q8TAA1 199 aaKnown RBP12.91□□□□□ -0.34
MCF2L-217ENST00000441756 AIFM2Q9BRQ8 373 aa12.91□□□□□ -0.34
MCF2L-217ENST00000441756 MRPL20Q9BYC9 149 aaKnown RBP12.91□□□□□ -0.34
MCF2L-217ENST00000441756 SLC35D1Q9NTN3 355 aa12.91□□□□□ -0.34
MCF2L-217ENST00000441756 NPFFO15130 113 aa12.9□□□□□ -0.34
MCF2L-217ENST00000441756 FCGR3BO75015 233 aa12.9□□□□□ -0.34
MCF2L-217ENST00000441756 CCNKO75909 580 aa12.9□□□□□ -0.34
MCF2L-217ENST00000441756 HPRT1P00492 218 aa12.9□□□□□ -0.34
MCF2L-217ENST00000441756 CT45A6P0DMU7 189 aa12.9□□□□□ -0.34
MCF2L-217ENST00000441756 CT45A5P0DMU8 189 aa12.9□□□□□ -0.34
MCF2L-217ENST00000441756 CT45A7P0DMV0 189 aa12.9□□□□□ -0.34
MCF2L-217ENST00000441756 LPAR6P43657 344 aa12.9□□□□□ -0.34
MCF2L-217ENST00000441756 AKR1C2P52895 323 aa12.9□□□□□ -0.34
MCF2L-217ENST00000441756 CYCSP99999 105 aaKnown RBP12.9□□□□□ -0.34
MCF2L-217ENST00000441756 PRB3Q04118 309 aaPredicted RBP12.9□□□□□ -0.34
MCF2L-217ENST00000441756 OR2B11Q5JQS5 317 aa12.9□□□□□ -0.34
MCF2L-217ENST00000441756 PDPNQ86YL7 162 aa12.9□□□□□ -0.34
MCF2L-217ENST00000441756 SLC35G3Q8N808 338 aa12.9□□□□□ -0.34
MCF2L-217ENST00000441756 ZNF383Q8NA42 475 aa12.9□□□□□ -0.34
MCF2L-217ENST00000441756 DRAXINQ8NBI3 349 aaPredicted RBP12.9□□□□□ -0.34
MCF2L-217ENST00000441756 MAPK1IP1LQ8NDC0 245 aa12.9□□□□□ -0.34
MCF2L-217ENST00000441756 OR5M8Q8NGP6 311 aa12.9□□□□□ -0.34
MCF2L-217ENST00000441756 DDB2Q92466 427 aa12.9□□□□□ -0.34
MCF2L-217ENST00000441756 RRNAD1Q96FB5 475 aaKnown RBP12.9□□□□□ -0.34
MCF2L-217ENST00000441756 C18orf12Q96KH6 178 aa12.9□□□□□ -0.34
MCF2L-217ENST00000441756 SPIN2AQ99865 258 aa12.9□□□□□ -0.34
MCF2L-217ENST00000441756 SPIN2BQ9BPZ2 258 aa12.9□□□□□ -0.34
MCF2L-217ENST00000441756 NABP2Q9BQ15 211 aa12.9□□□□□ -0.34
MCF2L-217ENST00000441756 PDCD10Q9BUL8 212 aa12.9□□□□□ -0.34
MCF2L-217ENST00000441756 PLEKHA2Q9HB19 425 aa12.9□□□□□ -0.34
MCF2L-217ENST00000441756 TRAV40A0A0B4J280 105 aa12.89□□□□□ -0.35
MCF2L-217ENST00000441756 IGHV1-69DA0A0B4J2H0 117 aa12.89□□□□□ -0.35
MCF2L-217ENST00000441756 C5orf51A6NDU8 294 aa12.89□□□□□ -0.35
MCF2L-217ENST00000441756 LY6LH3BQJ8 138 aa12.89□□□□□ -0.35
MCF2L-217ENST00000441756 IGHV1-69P01742 117 aa12.89□□□□□ -0.35
MCF2L-217ENST00000441756 VDAC1P21796 283 aa12.89□□□□□ -0.35
MCF2L-217ENST00000441756 REG1BP48304 166 aa12.89□□□□□ -0.35
MCF2L-217ENST00000441756 BPIFB3P59826 476 aa12.89□□□□□ -0.35
MCF2L-217ENST00000441756 ERVK-16P61578 105 aa12.89□□□□□ -0.35
MCF2L-217ENST00000441756 FAM219AQ8IW50 185 aa12.89□□□□□ -0.35
MCF2L-217ENST00000441756 SELENOHQ8IZQ5 122 aaKnown RBP12.89□□□□□ -0.35
MCF2L-217ENST00000441756 OR11H7Q8NGC8 314 aa12.89□□□□□ -0.35
MCF2L-217ENST00000441756 OR5AN1Q8NGI8 311 aa12.89□□□□□ -0.35
MCF2L-217ENST00000441756 ZNF436Q9C0F3 470 aaPredicted RBP12.89□□□□□ -0.35
MCF2L-217ENST00000441756 PRR13Q9NZ81 148 aa12.89□□□□□ -0.35
MCF2L-217ENST00000441756 ITGB1BP2Q9UKP3 347 aa12.89□□□□□ -0.35
MCF2L-217ENST00000441756 WASHC3Q9Y3C0 194 aa12.89□□□□□ -0.35
MCF2L-217ENST00000441756 TACC2O95359 2948 aa12.88□□□□□ -0.35
MCF2L-217ENST00000441756 IGHV1-3A0A0C4DH29 117 aa12.88□□□□□ -0.35
MCF2L-217ENST00000441756 CENPVL3A0A0U1RRI6 287 aa12.88□□□□□ -0.35
MCF2L-217ENST00000441756 FAM25EA8MYX2 175 aa12.88□□□□□ -0.35
MCF2L-217ENST00000441756 H0YJW9 148 aa12.88□□□□□ -0.35
MCF2L-217ENST00000441756 H7C2Y5 167 aa12.88□□□□□ -0.35
MCF2L-217ENST00000441756 HRASP01112 189 aa12.88□□□□□ -0.35
MCF2L-217ENST00000441756 HOXB5P09067 269 aa12.88□□□□□ -0.35
MCF2L-217ENST00000441756 GIPP09681 153 aaPredicted RBP12.88□□□□□ -0.35
MCF2L-217ENST00000441756 SAA4P35542 130 aa12.88□□□□□ -0.35
MCF2L-217ENST00000441756 ZNF585BQ52M93 769 aa12.88□□□□□ -0.35
MCF2L-217ENST00000441756 THOC7Q6I9Y2 204 aaKnown RBP12.88□□□□□ -0.35
MCF2L-217ENST00000441756 C1orf229Q6ZS94 237 aaPredicted RBP12.88□□□□□ -0.35
MCF2L-217ENST00000441756 PDZD9Q8IXQ8 264 aa12.88□□□□□ -0.35
MCF2L-217ENST00000441756 LHFPL5Q8TAF8 219 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms