RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 CLCC1Q96S66 551 aa13.73□□□□□ -0.21
NUP50-208ENST00000430547 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.73□□□□□ -0.21
NUP50-208ENST00000430547 ZMAT5Q9UDW3 170 aaKnown RBP13.73□□□□□ -0.21
NUP50-208ENST00000430547 VSIG4Q9Y279 399 aa13.73□□□□□ -0.21
NUP50-208ENST00000430547 IGLV1-40P01703 118 aa13.72□□□□□ -0.21
NUP50-208ENST00000430547 SNRPBP14678 240 aaKnown RBP13.72□□□□□ -0.21
NUP50-208ENST00000430547 CD36P16671 472 aa13.72□□□□□ -0.21
NUP50-208ENST00000430547 PITPNAQ00169 270 aa13.72□□□□□ -0.21
NUP50-208ENST00000430547 NDPQ00604 133 aa13.72□□□□□ -0.21
NUP50-208ENST00000430547 EGFEM1PQ0D2K5 195 aa13.72□□□□□ -0.21
NUP50-208ENST00000430547 PSG5Q15238 335 aa13.72□□□□□ -0.21
NUP50-208ENST00000430547 Q6ZS49 121 aa13.72□□□□□ -0.21
NUP50-208ENST00000430547 KLK15Q9H2R5 256 aa13.72□□□□□ -0.21
NUP50-208ENST00000430547 SDHAF2Q9NX18 166 aa13.72□□□□□ -0.21
NUP50-208ENST00000430547 FOXA2Q9Y261 457 aaPredicted RBP13.72□□□□□ -0.21
NUP50-208ENST00000430547 CA2P00918 260 aa13.71□□□□□ -0.21
NUP50-208ENST00000430547 CD40LGP29965 261 aa13.71□□□□□ -0.21
NUP50-208ENST00000430547 RAB9AP51151 201 aa13.71□□□□□ -0.21
NUP50-208ENST00000430547 CRIP2P52943 208 aaPredicted RBP13.71□□□□□ -0.21
NUP50-208ENST00000430547 LINC00205P59089 165 aa13.71□□□□□ -0.21
NUP50-208ENST00000430547 GNG2P59768 71 aa13.71□□□□□ -0.21
NUP50-208ENST00000430547 KRTAP10-11P60412 298 aa13.71□□□□□ -0.21
NUP50-208ENST00000430547 TAGLNQ01995 201 aaKnown RBP13.71□□□□□ -0.21
NUP50-208ENST00000430547 RTL8BQ17RB0 113 aa13.71□□□□□ -0.21
NUP50-208ENST00000430547 HACD4Q5VWC8 232 aa13.71□□□□□ -0.21
NUP50-208ENST00000430547 UNQ5815/PRO19632Q6UWF5 114 aa13.71□□□□□ -0.21
NUP50-208ENST00000430547 PPP1R27Q86WC6 154 aa13.71□□□□□ -0.21
NUP50-208ENST00000430547 ZNF491Q8N8L2 437 aa13.71□□□□□ -0.21
NUP50-208ENST00000430547 MINDY2Q8NBR6 621 aa13.71□□□□□ -0.21
NUP50-208ENST00000430547 OR11H1Q8NG94 326 aa13.71□□□□□ -0.21
NUP50-208ENST00000430547 MYOZ3Q8TDC0 251 aa13.71□□□□□ -0.21
NUP50-208ENST00000430547 HARBI1Q96MB7 349 aa13.71□□□□□ -0.21
NUP50-208ENST00000430547 ST6GALNAC5Q9BVH7 336 aa13.71□□□□□ -0.21
NUP50-208ENST00000430547 VCX3AQ9NNX9 186 aa13.71□□□□□ -0.21
NUP50-208ENST00000430547 RHBDL2Q9NX52 303 aa13.71□□□□□ -0.21
NUP50-208ENST00000430547 ELF5Q9UKW6 265 aaPredicted RBP13.71□□□□□ -0.21
NUP50-208ENST00000430547 GAB2Q9UQC2 676 aa13.71□□□□□ -0.21
NUP50-208ENST00000430547 FBXO7Q9Y3I1 522 aa13.71□□□□□ -0.21
NUP50-208ENST00000430547 DNAH3Q8TD57 4116 aa13.7□□□□□ -0.22
NUP50-208ENST00000430547 TMEM235A6NFC5 223 aa13.7□□□□□ -0.22
NUP50-208ENST00000430547 FCN1O00602 326 aa13.7□□□□□ -0.22
NUP50-208ENST00000430547 SLC25A17O43808 307 aa13.7□□□□□ -0.22
NUP50-208ENST00000430547 TIMM50Q3ZCQ8 353 aa13.7□□□□□ -0.22
NUP50-208ENST00000430547 ACTBL2Q562R1 376 aa13.7□□□□□ -0.22
NUP50-208ENST00000430547 DEFB121Q5J5C9 76 aa13.7□□□□□ -0.22
NUP50-208ENST00000430547 IDNKQ5T6J7 187 aa13.7□□□□□ -0.22
NUP50-208ENST00000430547 PYHIN1Q6K0P9 492 aa13.7□□□□□ -0.22
NUP50-208ENST00000430547 ZNF562Q6V9R5 426 aa13.7□□□□□ -0.22
NUP50-208ENST00000430547 H1FOOQ8IZA3 346 aaPredicted RBP13.7□□□□□ -0.22
NUP50-208ENST00000430547 NUDCD2Q8WVJ2 157 aa13.7□□□□□ -0.22
NUP50-208ENST00000430547 OR5B12Q96R08 314 aa13.7□□□□□ -0.22
NUP50-208ENST00000430547 FAM103A1Q9BTL3 118 aaKnown RBP13.7□□□□□ -0.22
NUP50-208ENST00000430547 DCSTAMPQ9H295 470 aa13.7□□□□□ -0.22
NUP50-208ENST00000430547 RNF167Q9H6Y7 350 aa13.7□□□□□ -0.22
NUP50-208ENST00000430547 GNB4Q9HAV0 340 aa13.7□□□□□ -0.22
NUP50-208ENST00000430547 ETV7Q9Y603 341 aa13.7□□□□□ -0.22
NUP50-208ENST00000430547 K7EIL1 84 aa13.69□□□□□ -0.22
NUP50-208ENST00000430547 SHOXO15266 292 aa13.69□□□□□ -0.22
NUP50-208ENST00000430547 CNIH1O95406 144 aa13.69□□□□□ -0.22
NUP50-208ENST00000430547 CTXN2P0C2S0 81 aa13.69□□□□□ -0.22
NUP50-208ENST00000430547 CLEC2LP0C7M8 214 aa13.69□□□□□ -0.22
NUP50-208ENST00000430547 OR8U8P0C7N1 319 aa13.69□□□□□ -0.22
NUP50-208ENST00000430547 RRASP10301 218 aa13.69□□□□□ -0.22
NUP50-208ENST00000430547 LGALS7P47929 136 aa13.69□□□□□ -0.22
NUP50-208ENST00000430547 SCAND1P57086 179 aa13.69□□□□□ -0.22
NUP50-208ENST00000430547 ZNF616Q08AN1 781 aa13.69□□□□□ -0.22
NUP50-208ENST00000430547 C9orf66Q5T8R8 295 aa13.69□□□□□ -0.22
NUP50-208ENST00000430547 OR1N2Q8NGR9 330 aa13.69□□□□□ -0.22
NUP50-208ENST00000430547 GRPEL2Q8TAA5 225 aa13.69□□□□□ -0.22
NUP50-208ENST00000430547 ARPC1AQ92747 370 aa13.69□□□□□ -0.22
NUP50-208ENST00000430547 ADTRPQ96IZ2 230 aa13.69□□□□□ -0.22
NUP50-208ENST00000430547 NUBP2Q9Y5Y2 271 aa13.69□□□□□ -0.22
NUP50-208ENST00000430547 IGKV1D-8A0A087WSZ0 117 aa13.68□□□□□ -0.22
NUP50-208ENST00000430547 WI2-2373I1.2A0A1W2PRP0 233 aa13.68□□□□□ -0.22
NUP50-208ENST00000430547 GNB1P62873 340 aa13.68□□□□□ -0.22
NUP50-208ENST00000430547 DGCR2P98153 550 aa13.68□□□□□ -0.22
NUP50-208ENST00000430547 RUNX1Q01196 453 aa13.68□□□□□ -0.22
NUP50-208ENST00000430547 FHL3Q13643 280 aa13.68□□□□□ -0.22
NUP50-208ENST00000430547 FXYD3Q14802 87 aa13.68□□□□□ -0.22
NUP50-208ENST00000430547 AKIRIN2Q53H80 203 aa13.68□□□□□ -0.22
NUP50-208ENST00000430547 C19orf54Q5BKX5 351 aa13.68□□□□□ -0.22
NUP50-208ENST00000430547 BVESQ8NE79 360 aa13.68□□□□□ -0.22
NUP50-208ENST00000430547 LFNGQ8NES3 379 aa13.68□□□□□ -0.22
NUP50-208ENST00000430547 TPSG1Q9NRR2 321 aa13.68□□□□□ -0.22
NUP50-208ENST00000430547 SEC14L6B5MCN3 397 aa13.67□□□□□ -0.22
NUP50-208ENST00000430547 I3L521 148 aa13.67□□□□□ -0.22
NUP50-208ENST00000430547 J3QRK9 145 aa13.67□□□□□ -0.22
NUP50-208ENST00000430547 SOX15O60248 233 aa13.67□□□□□ -0.22
NUP50-208ENST00000430547 LUMP51884 338 aaPredicted RBP13.67□□□□□ -0.22
NUP50-208ENST00000430547 DCTN2Q13561 401 aaKnown RBP13.67□□□□□ -0.22
NUP50-208ENST00000430547 ZNF260Q3ZCT1 412 aa13.67□□□□□ -0.22
NUP50-208ENST00000430547 CASTOR1Q8WTX7 329 aa13.67□□□□□ -0.22
NUP50-208ENST00000430547 A0A087WXM4 84 aa13.66□□□□□ -0.22
NUP50-208ENST00000430547 RAMP3O60896 148 aa13.66□□□□□ -0.22
NUP50-208ENST00000430547 TNFAIP8O95379 198 aa13.66□□□□□ -0.22
NUP50-208ENST00000430547 EGR2P11161 476 aaPredicted RBP13.66□□□□□ -0.22
NUP50-208ENST00000430547 NFYAP23511 347 aaPredicted RBP13.66□□□□□ -0.22
NUP50-208ENST00000430547 TPPP2P59282 170 aa13.66□□□□□ -0.22
NUP50-208ENST00000430547 KIAA0141Q14154 515 aaPredicted RBP13.66□□□□□ -0.22
NUP50-208ENST00000430547 TMEM177Q53S58 311 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms