RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 TNCP24821 2201 aa12.44□□□□□ -0.42
COL18A1-205ENST00000423214 DYNC2H1Q8NCM8 4307 aaKnown RBP12.44□□□□□ -0.42
COL18A1-205ENST00000423214 TRBV6-6A0A0A6YYG2 114 aa12.44□□□□□ -0.42
COL18A1-205ENST00000423214 TRIM64CA6NLI5 447 aa12.44□□□□□ -0.42
COL18A1-205ENST00000423214 EGR2P11161 476 aaPredicted RBP12.44□□□□□ -0.42
COL18A1-205ENST00000423214 CEACAM6P40199 344 aa12.44□□□□□ -0.42
COL18A1-205ENST00000423214 RPS16P62249 146 aaKnown RBP12.44□□□□□ -0.42
COL18A1-205ENST00000423214 PSG5Q15238 335 aa12.44□□□□□ -0.42
COL18A1-205ENST00000423214 C2orf76Q3KRA6 126 aa12.44□□□□□ -0.42
COL18A1-205ENST00000423214 HES5Q5TA89 166 aa12.44□□□□□ -0.42
COL18A1-205ENST00000423214 ZNF562Q6V9R5 426 aa12.44□□□□□ -0.42
COL18A1-205ENST00000423214 PDPNQ86YL7 162 aa12.44□□□□□ -0.42
COL18A1-205ENST00000423214 DRAXINQ8NBI3 349 aaPredicted RBP12.44□□□□□ -0.42
COL18A1-205ENST00000423214 AGMATQ9BSE5 352 aa12.44□□□□□ -0.42
COL18A1-205ENST00000423214 TPSG1Q9NRR2 321 aa12.44□□□□□ -0.42
COL18A1-205ENST00000423214 V9GY05 133 aa12.44□□□□□ -0.42
COL18A1-205ENST00000423214 SHISA3A0PJX4 238 aa12.43□□□□□ -0.42
COL18A1-205ENST00000423214 LYL1P12980 280 aa12.43□□□□□ -0.42
COL18A1-205ENST00000423214 VEGFCP49767 419 aa12.43□□□□□ -0.42
COL18A1-205ENST00000423214 PLA2G7Q13093 441 aa12.43□□□□□ -0.42
COL18A1-205ENST00000423214 HAPLN4Q86UW8 402 aa12.43□□□□□ -0.42
COL18A1-205ENST00000423214 ANKRD13BQ86YJ7 626 aa12.43□□□□□ -0.42
COL18A1-205ENST00000423214 FAM3DQ96BQ1 224 aa12.43□□□□□ -0.42
COL18A1-205ENST00000423214 C11orf54Q9H0W9 315 aaPredicted RBP12.43□□□□□ -0.42
COL18A1-205ENST00000423214 C13orf42A0A1B0GVH6 325 aa12.42□□□□□ -0.42
COL18A1-205ENST00000423214 DENRO43583 198 aaKnown RBP12.42□□□□□ -0.42
COL18A1-205ENST00000423214 SLC25A17O43808 307 aa12.42□□□□□ -0.42
COL18A1-205ENST00000423214 IGKV1-16P04430 117 aa12.42□□□□□ -0.42
COL18A1-205ENST00000423214 TMEM50BP56557 158 aa12.42□□□□□ -0.42
COL18A1-205ENST00000423214 OR10A3P58181 314 aa12.42□□□□□ -0.42
COL18A1-205ENST00000423214 GABARAPL2P60520 117 aa12.42□□□□□ -0.42
COL18A1-205ENST00000423214 CBX3Q13185 183 aa12.42□□□□□ -0.42
COL18A1-205ENST00000423214 SGPP2Q8IWX5 399 aa12.42□□□□□ -0.42
COL18A1-205ENST00000423214 SPARTQ8N0X7 666 aa12.42□□□□□ -0.42
COL18A1-205ENST00000423214 FAM89BQ8N5H3 189 aa12.42□□□□□ -0.42
COL18A1-205ENST00000423214 POC5Q8NA72 575 aa12.42□□□□□ -0.42
COL18A1-205ENST00000423214 RHOVQ96L33 236 aa12.42□□□□□ -0.42
COL18A1-205ENST00000423214 CMSS1Q9BQ75 279 aaKnown RBP12.42□□□□□ -0.42
COL18A1-205ENST00000423214 Q9N2K0 584 aa12.42□□□□□ -0.42
COL18A1-205ENST00000423214 TMEM272A0A1B0GTI8 110 aa12.41□□□□□ -0.42
COL18A1-205ENST00000423214 H3BUA1 57 aa12.41□□□□□ -0.42
COL18A1-205ENST00000423214 M0R1X1 148 aa12.41□□□□□ -0.42
COL18A1-205ENST00000423214 CNIH1O95406 144 aa12.41□□□□□ -0.42
COL18A1-205ENST00000423214 SCTP09683 121 aa12.41□□□□□ -0.42
COL18A1-205ENST00000423214 ZP3P21754 424 aa12.41□□□□□ -0.42
COL18A1-205ENST00000423214 MRPS15P82914 257 aaKnown RBP12.41□□□□□ -0.42
COL18A1-205ENST00000423214 FXYD3Q14802 87 aa12.41□□□□□ -0.42
COL18A1-205ENST00000423214 PTX4Q96A99 478 aa12.41□□□□□ -0.42
COL18A1-205ENST00000423214 ARHGAP5-AS1Q96IT6 56 aa12.41□□□□□ -0.42
COL18A1-205ENST00000423214 Q9H521 79 aa12.41□□□□□ -0.42
COL18A1-205ENST00000423214 RANGRFQ9HD47 186 aaPredicted RBP12.41□□□□□ -0.42
COL18A1-205ENST00000423214 SLC35D1Q9NTN3 355 aa12.41□□□□□ -0.42
COL18A1-205ENST00000423214 NDUFB11Q9NX14 153 aa12.41□□□□□ -0.42
COL18A1-205ENST00000423214 HSF4Q9ULV5 492 aa12.41□□□□□ -0.42
COL18A1-205ENST00000423214 A0A0G2JLM5 398 aa12.4□□□□□ -0.42
COL18A1-205ENST00000423214 TRDV1A0A1B0GX56 115 aa12.4□□□□□ -0.42
COL18A1-205ENST00000423214 SMIM30A4D0T7 59 aa12.4□□□□□ -0.42
COL18A1-205ENST00000423214 FOXI3A8MTJ6 420 aaPredicted RBP12.4□□□□□ -0.42
COL18A1-205ENST00000423214 LDLRAD4O15165 306 aa12.4□□□□□ -0.42
COL18A1-205ENST00000423214 IGHV4-30-4P0DP06 118 aa12.4□□□□□ -0.42
COL18A1-205ENST00000423214 PSMB9P28065 219 aa12.4□□□□□ -0.42
COL18A1-205ENST00000423214 PSMD7P51665 324 aa12.4□□□□□ -0.42
COL18A1-205ENST00000423214 C22orf42Q6IC83 251 aa12.4□□□□□ -0.42
COL18A1-205ENST00000423214 ZNF383Q8NA42 475 aa12.4□□□□□ -0.42
COL18A1-205ENST00000423214 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.4□□□□□ -0.42
COL18A1-205ENST00000423214 PECRQ9BY49 303 aa12.4□□□□□ -0.42
COL18A1-205ENST00000423214 RDH8Q9NYR8 311 aa12.4□□□□□ -0.42
COL18A1-205ENST00000423214 A0A0B4J203 849 aa12.39□□□□□ -0.43
COL18A1-205ENST00000423214 TRAV1-2A0A0B4J238 106 aa12.39□□□□□ -0.43
COL18A1-205ENST00000423214 ANKRD34BA5PLL1 514 aa12.39□□□□□ -0.43
COL18A1-205ENST00000423214 PDCD5O14737 125 aa12.39□□□□□ -0.43
COL18A1-205ENST00000423214 MRPS14O60783 128 aaKnown RBP12.39□□□□□ -0.43
COL18A1-205ENST00000423214 IGLV1-51P01701 117 aa12.39□□□□□ -0.43
COL18A1-205ENST00000423214 MYL9P24844 172 aa12.39□□□□□ -0.43
COL18A1-205ENST00000423214 RANBP1P43487 201 aa12.39□□□□□ -0.43
COL18A1-205ENST00000423214 MOGAT2Q3SYC2 334 aa12.39□□□□□ -0.43
COL18A1-205ENST00000423214 PLAC9Q5JTB6 97 aa12.39□□□□□ -0.43
COL18A1-205ENST00000423214 UBE2UQ5VVX9 321 aa12.39□□□□□ -0.43
COL18A1-205ENST00000423214 OR56B1Q8NGI3 324 aa12.39□□□□□ -0.43
COL18A1-205ENST00000423214 ISOC1Q96CN7 298 aa12.39□□□□□ -0.43
COL18A1-205ENST00000423214 HARBI1Q96MB7 349 aa12.39□□□□□ -0.43
COL18A1-205ENST00000423214 CITED4Q96RK1 184 aa12.39□□□□□ -0.43
COL18A1-205ENST00000423214 OR2D2Q9H210 308 aa12.39□□□□□ -0.43
COL18A1-205ENST00000423214 RAB22AQ9UL26 194 aa12.39□□□□□ -0.43
COL18A1-205ENST00000423214 TRDCB7Z8K6 153 aa12.38□□□□□ -0.43
COL18A1-205ENST00000423214 SNRPBP14678 240 aaKnown RBP12.38□□□□□ -0.43
COL18A1-205ENST00000423214 RAB3BP20337 219 aa12.38□□□□□ -0.43
COL18A1-205ENST00000423214 SERPINB10P48595 397 aa12.38□□□□□ -0.43
COL18A1-205ENST00000423214 LINC00205P59089 165 aa12.38□□□□□ -0.43
COL18A1-205ENST00000423214 OR5T1Q8NG75 326 aa12.38□□□□□ -0.43
COL18A1-205ENST00000423214 OR4A4PQ8NGN8 299 aa12.38□□□□□ -0.43
COL18A1-205ENST00000423214 TM2D3Q9BRN9 247 aa12.38□□□□□ -0.43
COL18A1-205ENST00000423214 RYR2Q92736 4967 aa12.37□□□□□ -0.43
COL18A1-205ENST00000423214 IGKV1-6A0A0C4DH72 117 aa12.37□□□□□ -0.43
COL18A1-205ENST00000423214 IFITM5A6NNB3 132 aa12.37□□□□□ -0.43
COL18A1-205ENST00000423214 BET1O15155 118 aa12.37□□□□□ -0.43
COL18A1-205ENST00000423214 PROP1O75360 226 aa12.37□□□□□ -0.43
COL18A1-205ENST00000423214 CD3GP09693 182 aa12.37□□□□□ -0.43
COL18A1-205ENST00000423214 LGALS7P47929 136 aa12.37□□□□□ -0.43
COL18A1-205ENST00000423214 DEFA5Q01523 94 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms