RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 CMSS1Q9BQ75 279 aaKnown RBP7.33□□□□□ -1.24
NUP50-205ENST00000419387 PECRQ9BY49 303 aa7.33□□□□□ -1.24
NUP50-205ENST00000419387 MRPS26Q9BYN8 205 aaKnown RBP7.33□□□□□ -1.24
NUP50-205ENST00000419387 OR1A1Q9P1Q5 309 aa7.33□□□□□ -1.24
NUP50-205ENST00000419387 RNF150Q9ULK6 438 aa7.33□□□□□ -1.24
NUP50-205ENST00000419387 SSR3Q9UNL2 185 aa7.33□□□□□ -1.24
NUP50-205ENST00000419387 WASHC3Q9Y3C0 194 aa7.33□□□□□ -1.24
NUP50-205ENST00000419387 LSM4Q9Y4Z0 139 aaKnown RBP7.33□□□□□ -1.24
NUP50-205ENST00000419387 NUBP2Q9Y5Y2 271 aa7.33□□□□□ -1.24
NUP50-205ENST00000419387 LOC100506127A0A0U1RQW1 187 aa7.32□□□□□ -1.24
NUP50-205ENST00000419387 TMEM272A0A1B0GTI8 110 aa7.32□□□□□ -1.24
NUP50-205ENST00000419387 A0A1W2PN81 502 aa7.32□□□□□ -1.24
NUP50-205ENST00000419387 PROP1O75360 226 aa7.32□□□□□ -1.24
NUP50-205ENST00000419387 NHLRC4P0CG21 123 aaPredicted RBP7.32□□□□□ -1.24
NUP50-205ENST00000419387 EGR2P11161 476 aaPredicted RBP7.32□□□□□ -1.24
NUP50-205ENST00000419387 CHRNA7P36544 502 aa7.32□□□□□ -1.24
NUP50-205ENST00000419387 INSL3P51460 131 aa7.32□□□□□ -1.24
NUP50-205ENST00000419387 GNB1P62873 340 aa7.32□□□□□ -1.24
NUP50-205ENST00000419387 NDPQ00604 133 aa7.32□□□□□ -1.24
NUP50-205ENST00000419387 ECSCRQ19T08 205 aa7.32□□□□□ -1.24
NUP50-205ENST00000419387 C19orf54Q5BKX5 351 aa7.32□□□□□ -1.24
NUP50-205ENST00000419387 HES5Q5TA89 166 aa7.32□□□□□ -1.24
NUP50-205ENST00000419387 ASPHD1Q5U4P2 390 aa7.32□□□□□ -1.24
NUP50-205ENST00000419387 TCTEX1D1Q8N7M0 179 aa7.32□□□□□ -1.24
NUP50-205ENST00000419387 PRR25Q96S07 402 aa7.32□□□□□ -1.24
NUP50-205ENST00000419387 C12orf4Q9NQ89 552 aa7.32□□□□□ -1.24
NUP50-205ENST00000419387 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.32□□□□□ -1.24
NUP50-205ENST00000419387 ZNF221Q9UK13 617 aa7.32□□□□□ -1.24
NUP50-205ENST00000419387 RAB22AQ9UL26 194 aa7.32□□□□□ -1.24
NUP50-205ENST00000419387 FOXA2Q9Y261 457 aaPredicted RBP7.32□□□□□ -1.24
NUP50-205ENST00000419387 KCNK7Q9Y2U2 307 aa7.32□□□□□ -1.24
NUP50-205ENST00000419387 FBXO7Q9Y3I1 522 aa7.32□□□□□ -1.24
NUP50-205ENST00000419387 IGKV1-6A0A0C4DH72 117 aa7.31□□□□□ -1.24
NUP50-205ENST00000419387 NOTOA8MTQ0 251 aa7.31□□□□□ -1.24
NUP50-205ENST00000419387 TRDCB7Z8K6 153 aa7.31□□□□□ -1.24
NUP50-205ENST00000419387 AIREO43918 545 aa7.31□□□□□ -1.24
NUP50-205ENST00000419387 SOX15O60248 233 aa7.31□□□□□ -1.24
NUP50-205ENST00000419387 NCS1P62166 190 aa7.31□□□□□ -1.24
NUP50-205ENST00000419387 RPS16P62249 146 aaKnown RBP7.31□□□□□ -1.24
NUP50-205ENST00000419387 LSM3P62310 102 aaKnown RBP7.31□□□□□ -1.24
NUP50-205ENST00000419387 MXD1Q05195 221 aa7.31□□□□□ -1.24
NUP50-205ENST00000419387 PSG5Q15238 335 aa7.31□□□□□ -1.24
NUP50-205ENST00000419387 MOGAT2Q3SYC2 334 aa7.31□□□□□ -1.24
NUP50-205ENST00000419387 AKIRIN2Q53H80 203 aa7.31□□□□□ -1.24
NUP50-205ENST00000419387 PLAC9Q5JTB6 97 aa7.31□□□□□ -1.24
NUP50-205ENST00000419387 ZNF562Q6V9R5 426 aa7.31□□□□□ -1.24
NUP50-205ENST00000419387 PPP1R27Q86WC6 154 aa7.31□□□□□ -1.24
NUP50-205ENST00000419387 DRAXINQ8NBI3 349 aaPredicted RBP7.31□□□□□ -1.24
NUP50-205ENST00000419387 ABHD5Q8WTS1 349 aa7.31□□□□□ -1.24
NUP50-205ENST00000419387 DCUN1D4Q92564 292 aa7.31□□□□□ -1.24
NUP50-205ENST00000419387 WWC2-AS2Q96NR7 200 aa7.31□□□□□ -1.24
NUP50-205ENST00000419387 CLCC1Q96S66 551 aa7.31□□□□□ -1.24
NUP50-205ENST00000419387 TSNAXQ99598 290 aaKnown RBP7.31□□□□□ -1.24
NUP50-205ENST00000419387 TOLLIPQ9H0E2 274 aa7.31□□□□□ -1.24
NUP50-205ENST00000419387 RDH8Q9NYR8 311 aa7.31□□□□□ -1.24
NUP50-205ENST00000419387 METTL1Q9UBP6 276 aaKnown RBP7.31□□□□□ -1.24
NUP50-205ENST00000419387 ZNF256Q9Y2P7 627 aaPredicted RBP7.31□□□□□ -1.24
NUP50-205ENST00000419387 A3GALT2U3KPV4 340 aa7.31□□□□□ -1.24
NUP50-205ENST00000419387 LINC01619G3V211 115 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 RAB27BO00194 218 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 PDCD5O14737 125 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 OVOL1O14753 267 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 GABARAPO95166 117 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 SPDEFO95238 335 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 IGKV1-16P04430 117 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 CD3GP09693 182 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 CD40LGP29965 261 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 SERPINB10P48595 397 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 LINC00205P59089 165 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 VBP1P61758 197 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 MRPS15P82914 257 aaKnown RBP7.3□□□□□ -1.24
NUP50-205ENST00000419387 ACTBL2Q562R1 376 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 GPR107Q5VW38 600 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 PYHIN1Q6K0P9 492 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 SFXN4Q6P4A7 337 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 UNQ5815/PRO19632Q6UWF5 114 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 ZNF429Q86V71 674 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 PDPNQ86YL7 162 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 ZNF383Q8NA42 475 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.3□□□□□ -1.24
NUP50-205ENST00000419387 OR4A4PQ8NGN8 299 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 OR5H6Q8NGV6 325 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 CASTOR1Q8WTX7 329 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 DLX4Q92988 240 aaPredicted RBP7.3□□□□□ -1.24
NUP50-205ENST00000419387 FLYWCH2Q96CP2 140 aaKnown RBP7.3□□□□□ -1.24
NUP50-205ENST00000419387 RAB3CQ96E17 227 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 FAM103A1Q9BTL3 118 aaKnown RBP7.3□□□□□ -1.24
NUP50-205ENST00000419387 ALX4Q9H161 411 aaPredicted RBP7.3□□□□□ -1.24
NUP50-205ENST00000419387 TPSG1Q9NRR2 321 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 GAB2Q9UQC2 676 aa7.3□□□□□ -1.24
NUP50-205ENST00000419387 M0R1X1 148 aa7.29□□□□□ -1.24
NUP50-205ENST00000419387 FABP7O15540 132 aa7.29□□□□□ -1.24
NUP50-205ENST00000419387 LY86O95711 162 aa7.29□□□□□ -1.24
NUP50-205ENST00000419387 CA2P00918 260 aa7.29□□□□□ -1.24
NUP50-205ENST00000419387 APOA2P02652 100 aa7.29□□□□□ -1.24
NUP50-205ENST00000419387 FCGR3AP08637 254 aa7.29□□□□□ -1.24
NUP50-205ENST00000419387 LGALS1P09382 135 aaKnown RBP7.29□□□□□ -1.24
NUP50-205ENST00000419387 MYL9P24844 172 aa7.29□□□□□ -1.24
NUP50-205ENST00000419387 RPL5P46777 297 aaKnown RBP7.29□□□□□ -1.24
NUP50-205ENST00000419387 SLURP1P55000 103 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms