RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 NPIPB9F8W1W9 429 aa10.37□□□□□ -0.75
UBR4-205ENST00000417040 MUC21Q5SSG8 566 aa10.37□□□□□ -0.75
UBR4-205ENST00000417040 ZNF418Q8TF45 676 aaPredicted RBP10.37□□□□□ -0.75
UBR4-205ENST00000417040 RAMP1O60894 148 aa10.37□□□□□ -0.75
UBR4-205ENST00000417040 SRSF12Q8WXF0 261 aaKnown RBP10.37□□□□□ -0.75
UBR4-205ENST00000417040 A8MWL6 223 aa10.37□□□□□ -0.75
UBR4-205ENST00000417040 ISG15P05161 165 aa10.37□□□□□ -0.75
UBR4-205ENST00000417040 C12orf54Q6X4T0 127 aa10.37□□□□□ -0.75
UBR4-205ENST00000417040 FAM181AQ8N9Y4 354 aa10.37□□□□□ -0.75
UBR4-205ENST00000417040 LHFPL6Q9Y693 200 aa10.37□□□□□ -0.75
UBR4-205ENST00000417040 ASCC3Q8N3C0 2202 aaKnown RBP10.36□□□□□ -0.75
UBR4-205ENST00000417040 IGLV1-36A0A0B4J1U3 117 aa10.36□□□□□ -0.75
UBR4-205ENST00000417040 ZNF708P17019 499 aa10.36□□□□□ -0.75
UBR4-205ENST00000417040 MAS1LP35410 378 aa10.36□□□□□ -0.75
UBR4-205ENST00000417040 ZBTB34Q8NCN2 500 aa10.36□□□□□ -0.75
UBR4-205ENST00000417040 SLC25A17O43808 307 aa10.36□□□□□ -0.75
UBR4-205ENST00000417040 CCL8P80075 99 aa10.36□□□□□ -0.75
UBR4-205ENST00000417040 TRA2AQ13595 282 aaKnown RBP eCLIP10.36□□□□□ -0.755e-8■■□□□ 14.4
UBR4-205ENST00000417040 TTC32Q5I0X7 151 aa10.36□□□□□ -0.75
UBR4-205ENST00000417040 OPN3Q9H1Y3 402 aaPredicted RBP10.36□□□□□ -0.75
UBR4-205ENST00000417040 GLI3P10071 1580 aa10.36□□□□□ -0.75
UBR4-205ENST00000417040 TMEM210A6NLX4 147 aa10.36□□□□□ -0.75
UBR4-205ENST00000417040 PRSS8Q16651 343 aa10.36□□□□□ -0.75
UBR4-205ENST00000417040 C2orf83Q53S99 150 aa10.36□□□□□ -0.75
UBR4-205ENST00000417040 PEAR1Q5VY43 1037 aaPredicted RBP10.36□□□□□ -0.75
UBR4-205ENST00000417040 FAM117AQ9C073 453 aa10.36□□□□□ -0.75
UBR4-205ENST00000417040 PTPRFP10586 1907 aa10.36□□□□□ -0.75
UBR4-205ENST00000417040 FCGR2BP31994 310 aaPredicted RBP10.35□□□□□ -0.75
UBR4-205ENST00000417040 ZP4Q12836 540 aa10.35□□□□□ -0.75
UBR4-205ENST00000417040 GCSAMLQ5JQS6 135 aa10.35□□□□□ -0.75
UBR4-205ENST00000417040 SPRED2Q7Z698 418 aa10.35□□□□□ -0.75
UBR4-205ENST00000417040 FOXA3P55318 350 aaPredicted RBP10.35□□□□□ -0.75
UBR4-205ENST00000417040 SLC25A53Q5H9E4 307 aa10.35□□□□□ -0.75
UBR4-205ENST00000417040 MMD2Q8IY49 270 aa10.35□□□□□ -0.75
UBR4-205ENST00000417040 KCNK17Q96T54 332 aa10.35□□□□□ -0.75
UBR4-205ENST00000417040 TTTY12Q9BZ98 90 aa10.35□□□□□ -0.75
UBR4-205ENST00000417040 TNFRSF9Q07011 255 aa10.35□□□□□ -0.75
UBR4-205ENST00000417040 TMEM45BQ96B21 275 aa10.35□□□□□ -0.75
UBR4-205ENST00000417040 PATE3B3GLJ2 98 aa10.35□□□□□ -0.75
UBR4-205ENST00000417040 FAM19A2Q8N3H0 131 aa10.35□□□□□ -0.75
UBR4-205ENST00000417040 C18orf15Q96N68 181 aa10.35□□□□□ -0.75
UBR4-205ENST00000417040 RAB1BQ9H0U4 201 aa10.35□□□□□ -0.75
UBR4-205ENST00000417040 K7N7A8 449 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 RRHO14718 337 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 HLA-DQA1P01909 254 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 LRRC75BQ2VPJ9 315 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 UNQ9370/PRO34162Q6UXP9 181 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 CDX2Q99626 313 aaPredicted RBP10.34□□□□□ -0.75
UBR4-205ENST00000417040 COL25A1Q9BXS0 654 aaPredicted RBP10.34□□□□□ -0.75
UBR4-205ENST00000417040 CD3EP07766 207 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 RPL31P62899 125 aaKnown RBP10.34□□□□□ -0.75
UBR4-205ENST00000417040 TFF3Q07654 80 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 MBNL2Q5VZF2 373 aaKnown RBP10.34□□□□□ -0.75
UBR4-205ENST00000417040 SLC22A18ASQ8N1D0 253 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 ZNF831Q5JPB2 1677 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 TMEM229AB2RXF0 380 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 TCF23Q7RTU1 214 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 WNT5BQ9H1J7 359 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 LAMB2P55268 1798 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 MCM3APO60318 1980 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 OTOFQ9HC10 1997 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 TRAV14DV4A0A0A6YYC5 116 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 DPRXA6NFQ7 191 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 A6NNC1 897 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 RPS11P62280 158 aaKnown RBP eCLIP10.34□□□□□ -0.755e-6■□□□□ 10.5
UBR4-205ENST00000417040 ROM1Q03395 351 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 HERPUD1Q15011 391 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 TMEM160Q9NX00 188 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 CDX4O14627 284 aaPredicted RBP10.34□□□□□ -0.75
UBR4-205ENST00000417040 THY1P04216 161 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 PRB4P10163 310 aaPredicted RBP10.34□□□□□ -0.75
UBR4-205ENST00000417040 CRYBA2P53672 197 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 FBXW9Q5XUX1 488 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 NFAM1Q8NET5 270 aaPredicted RBP10.34□□□□□ -0.75
UBR4-205ENST00000417040 STXBP6Q8NFX7 210 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 C16orf92Q96LL3 132 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 DLL3Q9NYJ7 618 aa10.34□□□□□ -0.75
UBR4-205ENST00000417040 HLA-DRB1P01911 266 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 MT-ND6P03923 174 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 RND2P52198 227 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 UCP2P55851 309 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 KLRB1Q12918 225 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 CENPWQ5EE01 88 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 TBL2Q9Y4P3 447 aaKnown RBP10.33□□□□□ -0.76
UBR4-205ENST00000417040 IGKV1D-42A0A075B6H8 117 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 IGHV3-23P01764 117 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 ASPHD2Q6ICH7 369 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 SLC25A47Q6Q0C1 308 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 C1QL2Q7Z5L3 287 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 FAM131CQ96AQ9 280 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 DLL1O00548 723 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 ZCCHC14Q8WYQ9 949 aaKnown RBP10.33□□□□□ -0.76
UBR4-205ENST00000417040 IGHV3OR16-12A0A075B7B8 117 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 A8MXK9 166 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 ADRA2AP08913 450 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 LOXL3P58215 753 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 EIF4EBP2Q13542 120 aaPredicted RBP10.33□□□□□ -0.76
UBR4-205ENST00000417040 C1orf100Q5SVJ3 147 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 FAM27BQ5VT28 67 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 OR4D5Q8NGN0 318 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms