RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 CABLES2Q9BTV7 478 aa11.34□□□□□ -0.59
NIF3L1-205ENST00000409588 DCSTAMPQ9H295 470 aa11.34□□□□□ -0.59
NIF3L1-205ENST00000409588 WSB1Q9Y6I7 421 aa11.34□□□□□ -0.59
NIF3L1-205ENST00000409588 IGKV1-6A0A0C4DH72 117 aa11.33□□□□□ -0.6
NIF3L1-205ENST00000409588 G3V318 75 aa11.33□□□□□ -0.6
NIF3L1-205ENST00000409588 I3L521 148 aa11.33□□□□□ -0.6
NIF3L1-205ENST00000409588 MFNGO00587 321 aa11.33□□□□□ -0.6
NIF3L1-205ENST00000409588 SLC22A5O76082 557 aa11.33□□□□□ -0.6
NIF3L1-205ENST00000409588 GNB3P16520 340 aa11.33□□□□□ -0.6
NIF3L1-205ENST00000409588 DTYMKP23919 212 aa11.33□□□□□ -0.6
NIF3L1-205ENST00000409588 LUMP51884 338 aaPredicted RBP11.33□□□□□ -0.6
NIF3L1-205ENST00000409588 OR10A3P58181 314 aa11.33□□□□□ -0.6
NIF3L1-205ENST00000409588 RPS16P62249 146 aaKnown RBP11.33□□□□□ -0.6
NIF3L1-205ENST00000409588 CBX3Q13185 183 aa11.33□□□□□ -0.6
NIF3L1-205ENST00000409588 ARFRP1Q13795 201 aa11.33□□□□□ -0.6
NIF3L1-205ENST00000409588 KIAA0141Q14154 515 aaPredicted RBP11.33□□□□□ -0.6
NIF3L1-205ENST00000409588 PSG5Q15238 335 aa11.33□□□□□ -0.6
NIF3L1-205ENST00000409588 OR1N2Q8NGR9 330 aa11.33□□□□□ -0.6
NIF3L1-205ENST00000409588 ADTRPQ96IZ2 230 aa11.33□□□□□ -0.6
NIF3L1-205ENST00000409588 ATG5Q9H1Y0 275 aa11.33□□□□□ -0.6
NIF3L1-205ENST00000409588 FBXL15Q9H469 300 aa11.33□□□□□ -0.6
NIF3L1-205ENST00000409588 SLA2Q9H6Q3 261 aa11.33□□□□□ -0.6
NIF3L1-205ENST00000409588 TXNL4BQ9NX01 149 aaKnown RBP11.33□□□□□ -0.6
NIF3L1-205ENST00000409588 FOXA2Q9Y261 457 aaPredicted RBP11.33□□□□□ -0.6
NIF3L1-205ENST00000409588 SHISA3A0PJX4 238 aa11.32□□□□□ -0.6
NIF3L1-205ENST00000409588 K7EIL1 84 aa11.32□□□□□ -0.6
NIF3L1-205ENST00000409588 BET1O15155 118 aa11.32□□□□□ -0.6
NIF3L1-205ENST00000409588 GSTT2P0CG29 244 aa11.32□□□□□ -0.6
NIF3L1-205ENST00000409588 GSTT2BP0CG30 244 aa11.32□□□□□ -0.6
NIF3L1-205ENST00000409588 PSMB9P28065 219 aa11.32□□□□□ -0.6
NIF3L1-205ENST00000409588 RAB25P57735 213 aa11.32□□□□□ -0.6
NIF3L1-205ENST00000409588 ZNF616Q08AN1 781 aa11.32□□□□□ -0.6
NIF3L1-205ENST00000409588 MOGAT2Q3SYC2 334 aa11.32□□□□□ -0.6
NIF3L1-205ENST00000409588 C19orf54Q5BKX5 351 aa11.32□□□□□ -0.6
NIF3L1-205ENST00000409588 GLDNQ6ZMI3 551 aaPredicted RBP11.32□□□□□ -0.6
NIF3L1-205ENST00000409588 ZNF383Q8NA42 475 aa11.32□□□□□ -0.6
NIF3L1-205ENST00000409588 GINS4Q9BRT9 223 aa11.32□□□□□ -0.6
NIF3L1-205ENST00000409588 PARP12Q9H0J9 701 aaKnown RBP11.32□□□□□ -0.6
NIF3L1-205ENST00000409588 KLK15Q9H2R5 256 aa11.32□□□□□ -0.6
NIF3L1-205ENST00000409588 METTL1Q9UBP6 276 aaKnown RBP11.32□□□□□ -0.6
NIF3L1-205ENST00000409588 RBM7Q9Y580 266 aaKnown RBP11.32□□□□□ -0.6
NIF3L1-205ENST00000409588 M0R1X1 148 aa11.31□□□□□ -0.6
NIF3L1-205ENST00000409588 FCN1O00602 326 aa11.31□□□□□ -0.6
NIF3L1-205ENST00000409588 OR8U9P0C7N5 309 aa11.31□□□□□ -0.6
NIF3L1-205ENST00000409588 HOXD3P31249 432 aaPredicted RBP11.31□□□□□ -0.6
NIF3L1-205ENST00000409588 CDNFQ49AH0 187 aa11.31□□□□□ -0.6
NIF3L1-205ENST00000409588 ACTBL2Q562R1 376 aa11.31□□□□□ -0.6
NIF3L1-205ENST00000409588 IGSF11Q5DX21 431 aa11.31□□□□□ -0.6
NIF3L1-205ENST00000409588 HACD4Q5VWC8 232 aa11.31□□□□□ -0.6
NIF3L1-205ENST00000409588 ZNF773Q6PK81 442 aa11.31□□□□□ -0.6
NIF3L1-205ENST00000409588 PPP1R27Q86WC6 154 aa11.31□□□□□ -0.6
NIF3L1-205ENST00000409588 DRAXINQ8NBI3 349 aaPredicted RBP11.31□□□□□ -0.6
NIF3L1-205ENST00000409588 SLC35D1Q9NTN3 355 aa11.31□□□□□ -0.6
NIF3L1-205ENST00000409588 SDHAF2Q9NX18 166 aa11.31□□□□□ -0.6
NIF3L1-205ENST00000409588 A0A1W2PN81 502 aa11.3□□□□□ -0.6
NIF3L1-205ENST00000409588 H3BUA1 57 aa11.3□□□□□ -0.6
NIF3L1-205ENST00000409588 BRI3O95415 125 aa11.3□□□□□ -0.6
NIF3L1-205ENST00000409588 IGKV1-16P04430 117 aa11.3□□□□□ -0.6
NIF3L1-205ENST00000409588 EGR2P11161 476 aaPredicted RBP11.3□□□□□ -0.6
NIF3L1-205ENST00000409588 CHRNA7P36544 502 aa11.3□□□□□ -0.6
NIF3L1-205ENST00000409588 PLA2G7Q13093 441 aa11.3□□□□□ -0.6
NIF3L1-205ENST00000409588 RTL8BQ17RB0 113 aa11.3□□□□□ -0.6
NIF3L1-205ENST00000409588 DEFB136Q30KP8 78 aa11.3□□□□□ -0.6
NIF3L1-205ENST00000409588 ZNF429Q86V71 674 aa11.3□□□□□ -0.6
NIF3L1-205ENST00000409588 DUX3Q96PT4 197 aa11.3□□□□□ -0.6
NIF3L1-205ENST00000409588 OR2D2Q9H210 308 aa11.3□□□□□ -0.6
NIF3L1-205ENST00000409588 DNAH3Q8TD57 4116 aa11.3□□□□□ -0.6
NIF3L1-205ENST00000409588 A0A075B6Q4 140 aa11.29□□□□□ -0.6
NIF3L1-205ENST00000409588 A0A0A6YYH2 397 aa11.29□□□□□ -0.6
NIF3L1-205ENST00000409588 WI2-2373I1.2A0A1W2PRP0 233 aa11.29□□□□□ -0.6
NIF3L1-205ENST00000409588 A6NJ64 397 aa11.29□□□□□ -0.6
NIF3L1-205ENST00000409588 SEC14L6B5MCN3 397 aa11.29□□□□□ -0.6
NIF3L1-205ENST00000409588 ECSCRQ19T08 205 aa11.29□□□□□ -0.6
NIF3L1-205ENST00000409588 TMEM177Q53S58 311 aa11.29□□□□□ -0.6
NIF3L1-205ENST00000409588 UNQ5815/PRO19632Q6UWF5 114 aa11.29□□□□□ -0.6
NIF3L1-205ENST00000409588 NR2C2APQ86WQ0 139 aa11.29□□□□□ -0.6
NIF3L1-205ENST00000409588 CROCCP3Q8IVE0 287 aa11.29□□□□□ -0.6
NIF3L1-205ENST00000409588 H1FOOQ8IZA3 346 aaPredicted RBP11.29□□□□□ -0.6
NIF3L1-205ENST00000409588 ABHD5Q8WTS1 349 aa11.29□□□□□ -0.6
NIF3L1-205ENST00000409588 ETV7Q9Y603 341 aa11.29□□□□□ -0.6
NIF3L1-205ENST00000409588 A0A0G2JLM5 398 aa11.28□□□□□ -0.6
NIF3L1-205ENST00000409588 CNIH1O95406 144 aa11.28□□□□□ -0.6
NIF3L1-205ENST00000409588 CA2P00918 260 aa11.28□□□□□ -0.6
NIF3L1-205ENST00000409588 FXYD3Q14802 87 aa11.28□□□□□ -0.6
NIF3L1-205ENST00000409588 TIMM50Q3ZCQ8 353 aa11.28□□□□□ -0.6
NIF3L1-205ENST00000409588 KCTD21Q4G0X4 260 aa11.28□□□□□ -0.6
NIF3L1-205ENST00000409588 SFXN4Q6P4A7 337 aa11.28□□□□□ -0.6
NIF3L1-205ENST00000409588 CNIH2Q6PI25 160 aa11.28□□□□□ -0.6
NIF3L1-205ENST00000409588 TEX45Q8NA69 505 aa11.28□□□□□ -0.6
NIF3L1-205ENST00000409588 LFNGQ8NES3 379 aa11.28□□□□□ -0.6
NIF3L1-205ENST00000409588 OSR1Q8TAX0 266 aaPredicted RBP11.28□□□□□ -0.6
NIF3L1-205ENST00000409588 ARPC1AQ92747 370 aa11.28□□□□□ -0.6
NIF3L1-205ENST00000409588 RBMXL1Q96E39 390 aaKnown RBP11.28□□□□□ -0.6
NIF3L1-205ENST00000409588 B9D2Q9BPU9 175 aa11.28□□□□□ -0.6
NIF3L1-205ENST00000409588 ST6GALNAC5Q9BVH7 336 aa11.28□□□□□ -0.6
NIF3L1-205ENST00000409588 GNB4Q9HAV0 340 aa11.28□□□□□ -0.6
NIF3L1-205ENST00000409588 ZNF230Q9UIE0 474 aaPredicted RBP11.28□□□□□ -0.6
NIF3L1-205ENST00000409588 DAPK2Q9UIK4 370 aa11.28□□□□□ -0.6
NIF3L1-205ENST00000409588 SCOCQ9UIL1 159 aa11.28□□□□□ -0.6
NIF3L1-205ENST00000409588 RRP15Q9Y3B9 282 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms