RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.62■□□□□ 0.09
USP39-202ENST00000409025 DIDO1Q9BTC0 2240 aaKnown RBP15.62■□□□□ 0.09
USP39-202ENST00000409025 ZZEF1O43149 2961 aa15.62■□□□□ 0.09
USP39-202ENST00000409025 ZNF705EA8MWA4 302 aaPredicted RBP15.62■□□□□ 0.09
USP39-202ENST00000409025 DVL1O14640 695 aa15.62■□□□□ 0.09
USP39-202ENST00000409025 MMP23AO75900 390 aa15.62■□□□□ 0.09
USP39-202ENST00000409025 HPRT1P00492 218 aa15.62■□□□□ 0.09
USP39-202ENST00000409025 GNLYP22749 145 aa15.62■□□□□ 0.09
USP39-202ENST00000409025 KIR2DS2P43631 304 aa15.62■□□□□ 0.09
USP39-202ENST00000409025 ZNF266Q14584 549 aa15.62■□□□□ 0.09
USP39-202ENST00000409025 STX12Q86Y82 276 aa15.62■□□□□ 0.09
USP39-202ENST00000409025 EIF4E3Q8N5X7 224 aaKnown RBP15.62■□□□□ 0.09
USP39-202ENST00000409025 S1PR3Q99500 378 aa15.62■□□□□ 0.09
USP39-202ENST00000409025 CTSZQ9UBR2 303 aa15.62■□□□□ 0.09
USP39-202ENST00000409025 PKDREJQ9NTG1 2253 aa15.62■□□□□ 0.09
USP39-202ENST00000409025 RBFOX2O43251 390 aaKnown RBP eCLIP15.61■□□□□ 0.09
USP39-202ENST00000409025 FCN3O75636 299 aa15.61■□□□□ 0.09
USP39-202ENST00000409025 CST7O76096 145 aa15.61■□□□□ 0.09
USP39-202ENST00000409025 FGF2P09038 288 aa15.61■□□□□ 0.09
USP39-202ENST00000409025 UQCRFS1P47985 274 aa15.61■□□□□ 0.09
USP39-202ENST00000409025 GNG10P50151 68 aa15.61■□□□□ 0.09
USP39-202ENST00000409025 SULT1A2P50226 295 aa15.61■□□□□ 0.09
USP39-202ENST00000409025 CLINT1Q14677 625 aa15.61■□□□□ 0.09
USP39-202ENST00000409025 MIDNQ504T8 468 aa15.61■□□□□ 0.09
USP39-202ENST00000409025 TMEM200BQ69YZ2 307 aa15.61■□□□□ 0.09
USP39-202ENST00000409025 ODF3L1Q8IXM7 274 aa15.61■□□□□ 0.09
USP39-202ENST00000409025 LYG1Q8N1E2 194 aa15.61■□□□□ 0.09
USP39-202ENST00000409025 R3HDM4Q96D70 268 aa15.61■□□□□ 0.09
USP39-202ENST00000409025 SAT2Q96F10 170 aaPredicted RBP15.61■□□□□ 0.09
USP39-202ENST00000409025 PSENENQ9NZ42 101 aa15.61■□□□□ 0.09
USP39-202ENST00000409025 USF3Q68DE3 2245 aa15.61■□□□□ 0.09
USP39-202ENST00000409025 SAA2-SAA4A0A096LPE2 208 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 TXNL1O43396 289 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 ZG16O60844 167 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 MED6O75586 246 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 SEC11BP0C7V7 166 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 SAA2P0DJI9 122 aaPredicted RBP15.6■□□□□ 0.09
USP39-202ENST00000409025 IAPPP10997 89 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 DAOP14920 347 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 COL8A2P25067 703 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 DYNLT3P51808 116 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 TAS2R30P59541 319 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 MRPS11P82912 194 aaKnown RBP15.6■□□□□ 0.09
USP39-202ENST00000409025 ZNF295-AS1Q8N0V1 137 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 OR1S2Q8NGQ3 325 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 OR5C1Q8NGR4 320 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 SMIM8Q96KF7 97 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 RAB1BQ9H0U4 201 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 CBLN4Q9NTU7 201 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 MARCH11A6NNE9 402 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 H3BP45 60 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 AGAP20933 346 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 SULT1A1P50225 295 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 UBE2KP61086 200 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 TNFRSF9Q07011 255 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 HEPN1Q6WQI6 88 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 TMEM217Q8N7C4 229 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 HSPB7Q9UBY9 170 aa15.6■□□□□ 0.09
USP39-202ENST00000409025 A8MXK9 166 aa15.59■□□□□ 0.09
USP39-202ENST00000409025 CCL3L1P16619 93 aa15.59■□□□□ 0.09
USP39-202ENST00000409025 THBS3P49746 956 aa15.59■□□□□ 0.09
USP39-202ENST00000409025 SLC25A48Q6ZT89 311 aaKnown RBP15.59■□□□□ 0.09
USP39-202ENST00000409025 ITLN2Q8WWU7 325 aaPredicted RBP15.59■□□□□ 0.09
USP39-202ENST00000409025 ADTRPQ96IZ2 230 aa15.59■□□□□ 0.09
USP39-202ENST00000409025 RBKSQ9H477 322 aa15.59■□□□□ 0.09
USP39-202ENST00000409025 YLPM1P49750 1951 aaKnown RBP15.59■□□□□ 0.09
USP39-202ENST00000409025 LYNX1G3V0Z9 82 aa15.58■□□□□ 0.09
USP39-202ENST00000409025 FSTL3O95633 263 aa15.58■□□□□ 0.09
USP39-202ENST00000409025 LYNX1P0DP58 116 aa15.58■□□□□ 0.09
USP39-202ENST00000409025 SPP1P10451 314 aa15.58■□□□□ 0.09
USP39-202ENST00000409025 C1orf229Q6ZS94 237 aaPredicted RBP15.58■□□□□ 0.09
USP39-202ENST00000409025 HSD17B11Q8NBQ5 300 aa15.58■□□□□ 0.09
USP39-202ENST00000409025 DDB2Q92466 427 aa15.58■□□□□ 0.09
USP39-202ENST00000409025 MARC2Q969Z3 335 aa15.58■□□□□ 0.09
USP39-202ENST00000409025 RAB39BQ96DA2 213 aa15.58■□□□□ 0.09
USP39-202ENST00000409025 RBMXL2O75526 392 aaKnown RBP15.58■□□□□ 0.08
USP39-202ENST00000409025 BLOC1S1P78537 153 aa15.58■□□□□ 0.08
USP39-202ENST00000409025 TMEM267Q0VDI3 215 aaPredicted RBP15.58■□□□□ 0.08
USP39-202ENST00000409025 OR4S2Q8NH73 311 aa15.58■□□□□ 0.08
USP39-202ENST00000409025 ZNF251Q9BRH9 671 aa15.58■□□□□ 0.08
USP39-202ENST00000409025 ANKHD1Q8IWZ3 2542 aaKnown RBP15.58■□□□□ 0.08
USP39-202ENST00000409025 ERVK-16P61578 105 aa15.57■□□□□ 0.08
USP39-202ENST00000409025 ATP5SQ99766 215 aa15.57■□□□□ 0.08
USP39-202ENST00000409025 PLA2G2EQ9NZK7 142 aa15.57■□□□□ 0.08
USP39-202ENST00000409025 NBASA2RRP1 2371 aa15.57■□□□□ 0.08
USP39-202ENST00000409025 FAM90A9PA6NNJ1 464 aa15.56■□□□□ 0.08
USP39-202ENST00000409025 NUDT19A8MXV4 375 aa15.56■□□□□ 0.08
USP39-202ENST00000409025 DFFBO76075 338 aa15.56■□□□□ 0.08
USP39-202ENST00000409025 NQO2P16083 231 aa15.56■□□□□ 0.08
USP39-202ENST00000409025 ARHGDIBP52566 201 aa15.56■□□□□ 0.08
USP39-202ENST00000409025 ERVFRD-1P60508 538 aa15.56■□□□□ 0.08
USP39-202ENST00000409025 ADGRG4Q8IZF6 3080 aa15.56■□□□□ 0.08
USP39-202ENST00000409025 RAB19A4D1S5 217 aa15.56■□□□□ 0.08
USP39-202ENST00000409025 KRBOX1C9JBD0 128 aa15.56■□□□□ 0.08
USP39-202ENST00000409025 IGHV2-70P01814 119 aa15.56■□□□□ 0.08
USP39-202ENST00000409025 ZP3P21754 424 aa15.56■□□□□ 0.08
USP39-202ENST00000409025 SPANXN5Q5MJ07 72 aa15.56■□□□□ 0.08
USP39-202ENST00000409025 PXDC1Q5TGL8 231 aa15.56■□□□□ 0.08
USP39-202ENST00000409025 C11orf71Q6IPW1 123 aa15.56■□□□□ 0.08
USP39-202ENST00000409025 TRBV23-1A0A0A0MS06 115 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms