RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 PLEKHA1Q9HB21 404 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 NEK6Q9HC98 313 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 ABCB9Q9NP78 766 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 ABCB10Q9NRK6 738 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 CKLFQ9UBR5 152 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 STARD10Q9Y365 291 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 NOP16Q9Y3C1 178 aaKnown RBP3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 MPC1Q9Y5U8 109 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 UBR5O95071 2799 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 KIAA2026Q5HYC2 2103 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 HELZ2Q9BYK8 2649 aaKnown RBP3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 IGLV3-9A0A075B6K5 115 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 A0A075B6Q4 140 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 TRAV8-7A0A075B6U6 113 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 ZNF816-ZNF321PA0A0X1KG74 233 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 C5orf63A6NC05 138 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 GGT3PA6NGU5 568 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 OR5B21A6NL26 309 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 DEFB108AA8MXU0 73 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 J3QKU1 62 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 K7N7A8 449 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 ABCD4O14678 606 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 SULT1B1O43704 296 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 CDRT1O95170 752 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 RAB3AP20336 220 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 RAB3BP20337 219 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 PRKACBP22694 351 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 CALRP27797 417 aaKnown RBP3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 LOXP28300 417 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 CALCRP30988 508 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 CD80P33681 288 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 SDC2P34741 201 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 RBMXP38159 391 aaKnown RBP3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 KIR2DS2P43631 304 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 SERPINB10P48595 397 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 RORCP51449 518 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 LSM3P62310 102 aaKnown RBP3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 PPP3R1P63098 170 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 BSPH1Q075Z2 132 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 EGFEM1PQ0D2K5 195 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 PSG7Q13046 419 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 INSL4Q14641 139 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 SPCS2Q15005 226 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 MOGQ16653 247 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 DGUOKQ16854 277 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 C1orf100Q5SVJ3 147 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 CLVS2Q5SYC1 327 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 SPATA46Q5T0L3 261 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 FAM27D1Q5T7N8 215 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 METTL11BQ5VVY1 283 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 GLT8D1Q68CQ7 371 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 LYPD6Q86Y78 171 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 SLC38A6Q8IZM9 456 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 KIR3DL3Q8N743 410 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 SPERTQ8NA61 448 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 OR1M1Q8NGA1 313 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 OR56B2PQ8NGI1 322 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 OR5A2Q8NGI9 324 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 LINC01006Q8NI28 216 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 SYNPRQ8TBG9 265 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 SLC25A40Q8TBP6 338 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 ACOT12Q8WYK0 555 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 MARC2Q969Z3 335 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 SLC25A46Q96AG3 418 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 FGGYQ96C11 551 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 CMBLQ96DG6 245 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 CPNE2Q96FN4 548 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 UQCC2Q9BRT2 126 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 C1QTNF6Q9BXI9 259 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 OR2J1Q9GZK6 312 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 NXF2Q9GZY0 626 aaKnown RBP3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 TMEM138Q9NPI0 162 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 CA10Q9NS85 328 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 SIGLEC8Q9NYZ4 499 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 PTTG3PQ9NZH4 202 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 CCDC59Q9P031 241 aaKnown RBP3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 CELA1Q9UNI1 258 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 PIGLQ9Y2B2 252 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 N6AMT1Q9Y5N5 214 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 V9GY05 133 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 USF3Q68DE3 2245 aa3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 USP9YO00507 2555 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P19-201ENST00000403971 SPG11Q96JI7 2443 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 FASNP49327 2511 aaKnown RBP3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 IGHV1OR15-1A0A075B7D0 117 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 IGKV1-9A0A0C4DH69 117 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 FAM231BA6NCW3 169 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 TMEM210A6NLX4 147 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 IFITM5A6NNB3 132 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 ATP6V1G2-DDX39BF2Z307 99 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 AIPO00170 330 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 MAGEB3O15480 346 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 GMDSO60547 372 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 NRASP01111 189 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 RPA2P15927 270 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 ATF1P18846 271 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 RBP2P50120 134 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 KLF3P57682 345 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 GNG3P63215 75 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 MXD1Q05195 221 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms