RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 ZFYVE21Q9BQ24 234 aa12.79□□□□□ -0.36
VLDLR-202ENST00000382099 CCL28Q9NRJ3 127 aa12.79□□□□□ -0.36
VLDLR-202ENST00000382099 hDV102S1A0JD36 115 aa12.78□□□□□ -0.36
VLDLR-202ENST00000382099 C9orf172C9J069 976 aa12.78□□□□□ -0.36
VLDLR-202ENST00000382099 H0Y8X5 98 aa12.78□□□□□ -0.36
VLDLR-202ENST00000382099 CLDN1O95832 211 aa12.78□□□□□ -0.36
VLDLR-202ENST00000382099 NPY1RP25929 384 aa12.78□□□□□ -0.36
VLDLR-202ENST00000382099 ADAMTSL4Q6UY14 1074 aa12.78□□□□□ -0.36
VLDLR-202ENST00000382099 OCC1Q8TAD7 63 aa12.78□□□□□ -0.36
VLDLR-202ENST00000382099 LMX1AQ8TE12 382 aa12.78□□□□□ -0.36
VLDLR-202ENST00000382099 TSKUQ8WUA8 353 aa12.78□□□□□ -0.36
VLDLR-202ENST00000382099 BADQ92934 168 aa12.78□□□□□ -0.36
VLDLR-202ENST00000382099 NINJ1Q92982 152 aa12.78□□□□□ -0.36
VLDLR-202ENST00000382099 FAM131CQ96AQ9 280 aa12.78□□□□□ -0.36
VLDLR-202ENST00000382099 TM2D1Q9BX74 207 aa12.78□□□□□ -0.36
VLDLR-202ENST00000382099 QTRT1Q9BXR0 403 aaKnown RBP12.78□□□□□ -0.36
VLDLR-202ENST00000382099 TMEM38BQ9NVV0 291 aa12.78□□□□□ -0.36
VLDLR-202ENST00000382099 OR51B2Q9Y5P1 312 aa12.78□□□□□ -0.36
VLDLR-202ENST00000382099 PRRC2CQ9Y520 2896 aaKnown RBP12.78□□□□□ -0.36
VLDLR-202ENST00000382099 MED12Q93074 2177 aa12.78□□□□□ -0.36
VLDLR-202ENST00000382099 FOXS1O43638 330 aa12.78□□□□□ -0.36
VLDLR-202ENST00000382099 MT-ATP6P00846 226 aa12.78□□□□□ -0.36
VLDLR-202ENST00000382099 USF1P22415 310 aaPredicted RBP12.78□□□□□ -0.36
VLDLR-202ENST00000382099 SLC25A34Q6PIV7 304 aa12.78□□□□□ -0.36
VLDLR-202ENST00000382099 ABHD14BQ96IU4 210 aa12.78□□□□□ -0.36
VLDLR-202ENST00000382099 Q96M66 194 aa12.78□□□□□ -0.36
VLDLR-202ENST00000382099 RPP25Q9BUL9 199 aaKnown RBP12.78□□□□□ -0.36
VLDLR-202ENST00000382099 REPIN1Q9BWE0 567 aaKnown RBP12.78□□□□□ -0.36
VLDLR-202ENST00000382099 IL36BQ9NZH7 164 aa12.78□□□□□ -0.36
VLDLR-202ENST00000382099 A6NJY4 79 aa12.77□□□□□ -0.36
VLDLR-202ENST00000382099 UCP1P25874 307 aa12.77□□□□□ -0.36
VLDLR-202ENST00000382099 TIMP3P35625 211 aa12.77□□□□□ -0.36
VLDLR-202ENST00000382099 RNASEKQ6P5S7 137 aaKnown RBP12.77□□□□□ -0.36
VLDLR-202ENST00000382099 C7orf61Q8IZ16 206 aa12.77□□□□□ -0.36
VLDLR-202ENST00000382099 OR7C1O76099 320 aaPredicted RBP12.77□□□□□ -0.37
VLDLR-202ENST00000382099 RPEL1Q2QD12 228 aa12.77□□□□□ -0.37
VLDLR-202ENST00000382099 MMD2Q8IY49 270 aa12.77□□□□□ -0.37
VLDLR-202ENST00000382099 PHPT1Q9NRX4 125 aaPredicted RBP12.77□□□□□ -0.37
VLDLR-202ENST00000382099 GPR27Q9NS67 375 aa12.77□□□□□ -0.37
VLDLR-202ENST00000382099 HSPB6O14558 160 aa12.77□□□□□ -0.37
VLDLR-202ENST00000382099 TNFSF15O95150 251 aa12.77□□□□□ -0.37
VLDLR-202ENST00000382099 COX5AP20674 150 aa12.77□□□□□ -0.37
VLDLR-202ENST00000382099 ZNF784Q8NCA9 323 aaPredicted RBP12.77□□□□□ -0.37
VLDLR-202ENST00000382099 CCL4L1Q8NHW4 92 aa12.77□□□□□ -0.37
VLDLR-202ENST00000382099 GUCD1Q96NT3 240 aa12.77□□□□□ -0.37
VLDLR-202ENST00000382099 WDR54Q9H977 334 aa12.77□□□□□ -0.37
VLDLR-202ENST00000382099 C2orf72A6NCS6 295 aa12.76□□□□□ -0.37
VLDLR-202ENST00000382099 H3BUT2 72 aa12.76□□□□□ -0.37
VLDLR-202ENST00000382099 HCRTR1O43613 425 aa12.76□□□□□ -0.37
VLDLR-202ENST00000382099 DXOO77932 396 aaKnown RBP12.76□□□□□ -0.37
VLDLR-202ENST00000382099 ZNF788Q6ZQV5 615 aa12.76□□□□□ -0.37
VLDLR-202ENST00000382099 PRTFDC1Q9NRG1 225 aa12.76□□□□□ -0.37
VLDLR-202ENST00000382099 DEC1Q9P2X7 70 aa12.76□□□□□ -0.37
VLDLR-202ENST00000382099 BLACEA4D250 179 aa12.76□□□□□ -0.37
VLDLR-202ENST00000382099 TGFBR3LH3BV60 316 aa12.76□□□□□ -0.37
VLDLR-202ENST00000382099 CD38P28907 300 aa12.76□□□□□ -0.37
VLDLR-202ENST00000382099 SSTR5P35346 364 aa12.76□□□□□ -0.37
VLDLR-202ENST00000382099 GPR6P46095 362 aaPredicted RBP12.76□□□□□ -0.37
VLDLR-202ENST00000382099 UBE2G1P62253 170 aa12.76□□□□□ -0.37
VLDLR-202ENST00000382099 RAB37Q96AX2 223 aa12.76□□□□□ -0.37
VLDLR-202ENST00000382099 NPVFQ9HCQ7 196 aa12.76□□□□□ -0.37
VLDLR-202ENST00000382099 OR4C46A6NHA9 309 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 CD5LO43866 347 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 RAMP3O60896 148 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 EML2O95834 649 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 NTSR1P30989 418 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 GPM6BQ13491 265 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 OR4A5Q8NH83 315 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 BAHD1Q8TBE0 780 aaPredicted RBP12.75□□□□□ -0.37
VLDLR-202ENST00000382099 WNT16Q9UBV4 365 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 ASXL3Q9C0F0 2248 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 PPIAL4CA0A0B4J2A2 164 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 E9PLN8 166 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 NPIPA3F8WFD2 350 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 H3BML4 177 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 PDE6DO43924 150 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 P2RY2P41231 377 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 MNX1P50219 401 aaPredicted RBP12.75□□□□□ -0.37
VLDLR-202ENST00000382099 CLRN1P58418 232 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 SLAQ13239 276 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 FAM216AQ8WUB2 273 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 MOB1AQ9H8S9 216 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 SERTAD4Q9NUC0 356 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 PPP1R3CQ9UQK1 317 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 TRBV20OR9-2A0A075B6H5 130 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 ZNF207O43670 478 aaKnown RBP12.75□□□□□ -0.37
VLDLR-202ENST00000382099 MALLQ13021 153 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 PATE1Q8WXA2 126 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 TM4SF19Q96DZ7 209 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 GP6Q9HCN6 339 aa12.75□□□□□ -0.37
VLDLR-202ENST00000382099 UNC13CQ8NB66 2214 aa12.74□□□□□ -0.37
VLDLR-202ENST00000382099 TRAV38-1A0A0B4J264 116 aa12.74□□□□□ -0.37
VLDLR-202ENST00000382099 SCO2A0A1W2PP80 73 aa12.74□□□□□ -0.37
VLDLR-202ENST00000382099 A0A1W2PPV4 95 aa12.74□□□□□ -0.37
VLDLR-202ENST00000382099 TMEM52BQ4KMG9 183 aa12.74□□□□□ -0.37
VLDLR-202ENST00000382099 EBLN2Q6P2I7 272 aa12.74□□□□□ -0.37
VLDLR-202ENST00000382099 MRPL43Q8N983 215 aaKnown RBP12.74□□□□□ -0.37
VLDLR-202ENST00000382099 OR2T6Q8NHC8 308 aa12.74□□□□□ -0.37
VLDLR-202ENST00000382099 COPS7AQ9UBW8 275 aa12.74□□□□□ -0.37
VLDLR-202ENST00000382099 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms