RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 SHISA2Q6UWI4 295 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 RHOUQ7L0Q8 258 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 SLC26A10Q8NG04 563 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 RHOXF1Q8NHV9 184 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 SLC25A37Q9NYZ2 338 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 OR2W1Q9Y3N9 320 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 TMSB15BA0A087X1C1 80 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 F5H768 121 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 LINC01619G3V211 115 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 TAAR5O14804 337 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 CCL3L1P16619 93 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 SLC25A47Q6Q0C1 308 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 KLHDC1Q8N7A1 406 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 NTNG2Q96CW9 530 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 CLEC2DQ9UHP7 191 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 TSSC4Q9Y5U2 329 aaPredicted RBP7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 LOC102723971A0A1B0GUV8 181 aa7.77□□□□□ -1.16
LIMCH1-202ENST00000381753 ZNF815PA8K554 130 aa7.77□□□□□ -1.16
LIMCH1-202ENST00000381753 E7EQL1 145 aa7.77□□□□□ -1.16
LIMCH1-202ENST00000381753 SLC17A2O00624 439 aa7.77□□□□□ -1.16
LIMCH1-202ENST00000381753 GGCTO75223 188 aaKnown RBP7.77□□□□□ -1.16
LIMCH1-202ENST00000381753 IGHA1P01876 353 aa7.77□□□□□ -1.16
LIMCH1-202ENST00000381753 IGHA2P01877 340 aa7.77□□□□□ -1.16
LIMCH1-202ENST00000381753 GABRB1P18505 474 aa7.77□□□□□ -1.16
LIMCH1-202ENST00000381753 PSG9Q00887 426 aa7.77□□□□□ -1.16
LIMCH1-202ENST00000381753 TBC1D26Q86UD7 250 aa7.77□□□□□ -1.16
LIMCH1-202ENST00000381753 TRDV1A0A1B0GX56 115 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 GCSHP23434 173 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 LYRM7Q5U5X0 104 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 MAVSQ7Z434 540 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 KIAA1217Q5T5P2 1943 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 GCM2O75603 506 aaPredicted RBP7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 TNFSF13O75888 250 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 FCGR3AP08637 254 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 CCR6P51684 374 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 RBM11P57052 281 aaKnown RBP7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 OR10J3Q5JRS4 329 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 MINOS1Q5TGZ0 78 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 PRSS45Q7RTY3 260 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 C15orf53Q8NAA6 179 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 OR5AP2Q8NGF4 316 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 MINOS1-NBL1R4GNA1 71 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 TET1Q8NFU7 2136 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 E5RGE8 158 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 CFDP00746 253 aaPredicted RBP7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 PSG7Q13046 419 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 RNF133Q8WVZ7 376 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 WDR89Q96FK6 387 aaPredicted RBP7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 Q9N2K0 584 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 C21orf62Q9NYP8 219 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 TMEM129A0AVI4 362 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 OR10AC1Q8NH08 325 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 RNF183Q96D59 192 aa7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 FAM103A1Q9BTL3 118 aaKnown RBP7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 COL11A1P12107 1806 aaPredicted RBP7.77□□□□□ -1.17
LIMCH1-202ENST00000381753 CCSO14618 274 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 RHOGP84095 191 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 HERPUD1Q15011 391 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 HAPLN4Q86UW8 402 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 DTX1Q86Y01 620 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 C10orf111Q8N326 155 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 ISG20L2Q9H9L3 353 aaKnown RBP7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 ADAM10O14672 748 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 MAS1LP35410 378 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 H3F3CQ6NXT2 135 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 PRADC1Q9BSG0 188 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 SELENOKQ9Y6D0 94 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 IGHV3OR16-8A0A075B7F1 116 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 TRAV14DV4A0A0A6YYC5 116 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 G3V3Q6 166 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 H0YL77 283 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 ZNF688P0C7X2 276 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 RND2P52198 227 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 BPIFA4PQ86YQ2 179 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 RAB40CQ96S21 281 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 CCL28Q9NRJ3 127 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 PSORS1C1Q9UIG5 152 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 IGHV1-69DA0A0B4J2H0 117 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 MFSD2BA6NFX1 497 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 ALX3O95076 343 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 IGHV1-69P01742 117 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 OPRL1P41146 370 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 TMEM97Q5BJF2 176 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 ASPHD2Q6ICH7 369 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 DYRK2Q92630 601 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 ZDHHC11Q9H8X9 412 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 ZNF586Q9NXT0 402 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 TNFRSF18Q9Y5U5 241 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 CEP250Q9BV73 2442 aa7.76□□□□□ -1.17
LIMCH1-202ENST00000381753 IFITM5A6NNB3 132 aa7.75□□□□□ -1.17
LIMCH1-202ENST00000381753 ZNF727A8MUV8 499 aa7.75□□□□□ -1.17
LIMCH1-202ENST00000381753 M0R1W7 72 aa7.75□□□□□ -1.17
LIMCH1-202ENST00000381753 CST7O76096 145 aa7.75□□□□□ -1.17
LIMCH1-202ENST00000381753 IGHG3P01860 377 aa7.75□□□□□ -1.17
LIMCH1-202ENST00000381753 IL4P05112 153 aa7.75□□□□□ -1.17
LIMCH1-202ENST00000381753 ERGP11308 486 aa7.75□□□□□ -1.17
LIMCH1-202ENST00000381753 M6PRP20645 277 aa7.75□□□□□ -1.17
LIMCH1-202ENST00000381753 CX3CL1P78423 397 aa7.75□□□□□ -1.17
LIMCH1-202ENST00000381753 DGCR2P98153 550 aa7.75□□□□□ -1.17
LIMCH1-202ENST00000381753 EFNB1P98172 346 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms