RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 LYPD2Q6UXB3 125 aa12.42□□□□□ -0.42
SNX2-201ENST00000379516 H2BFWTQ7Z2G1 175 aa12.42□□□□□ -0.42
SNX2-201ENST00000379516 HRH4Q9H3N8 390 aa12.42□□□□□ -0.42
SNX2-201ENST00000379516 LINC00312Q9Y6C7 94 aa12.42□□□□□ -0.42
SNX2-201ENST00000379516 PIEZO1Q92508 2521 aa12.42□□□□□ -0.42
SNX2-201ENST00000379516 FAM90A26D6RGX4 464 aa12.41□□□□□ -0.42
SNX2-201ENST00000379516 RAB29O14966 203 aa12.41□□□□□ -0.42
SNX2-201ENST00000379516 RPL31P62899 125 aaKnown RBP12.41□□□□□ -0.42
SNX2-201ENST00000379516 BLOC1S1P78537 153 aa12.41□□□□□ -0.42
SNX2-201ENST00000379516 PRAMEF5Q5TYX0 476 aa12.41□□□□□ -0.42
SNX2-201ENST00000379516 LINC00574Q9H8X3 128 aa12.41□□□□□ -0.42
SNX2-201ENST00000379516 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.41□□□□□ -0.42
SNX2-201ENST00000379516 C19orf12Q9NSK7 152 aa12.41□□□□□ -0.42
SNX2-201ENST00000379516 RAB19A4D1S5 217 aa12.41□□□□□ -0.42
SNX2-201ENST00000379516 MARCH11A6NNE9 402 aa12.41□□□□□ -0.42
SNX2-201ENST00000379516 NDUFB3O43676 98 aa12.41□□□□□ -0.42
SNX2-201ENST00000379516 GNG10P50151 68 aa12.41□□□□□ -0.42
SNX2-201ENST00000379516 SULT1A1P50225 295 aa12.41□□□□□ -0.42
SNX2-201ENST00000379516 TNFRSF9Q07011 255 aa12.41□□□□□ -0.42
SNX2-201ENST00000379516 ZNF273Q14593 569 aa12.41□□□□□ -0.42
SNX2-201ENST00000379516 TUSC1Q2TAM9 212 aa12.41□□□□□ -0.42
SNX2-201ENST00000379516 MIDNQ504T8 468 aa12.41□□□□□ -0.42
SNX2-201ENST00000379516 C1orf229Q6ZS94 237 aaPredicted RBP12.41□□□□□ -0.42
SNX2-201ENST00000379516 R3HDM4Q96D70 268 aa12.41□□□□□ -0.42
SNX2-201ENST00000379516 RBKSQ9H477 322 aa12.41□□□□□ -0.42
SNX2-201ENST00000379516 MMP26Q9NRE1 261 aa12.41□□□□□ -0.42
SNX2-201ENST00000379516 PRELID3BQ9Y3B1 194 aa12.41□□□□□ -0.42
SNX2-201ENST00000379516 ITPR1Q14643 2758 aa12.4□□□□□ -0.42
SNX2-201ENST00000379516 TNFRSF13BO14836 293 aaPredicted RBP12.4□□□□□ -0.42
SNX2-201ENST00000379516 RBMXL2O75526 392 aaKnown RBP12.4□□□□□ -0.42
SNX2-201ENST00000379516 FCN3O75636 299 aa12.4□□□□□ -0.42
SNX2-201ENST00000379516 HPRT1P00492 218 aa12.4□□□□□ -0.42
SNX2-201ENST00000379516 MEF2CQ06413 473 aaPredicted RBP12.4□□□□□ -0.42
SNX2-201ENST00000379516 HFEQ30201 348 aa12.4□□□□□ -0.42
SNX2-201ENST00000379516 LRRC10Q5BKY1 277 aa12.4□□□□□ -0.42
SNX2-201ENST00000379516 Q6ZRG5 221 aa12.4□□□□□ -0.42
SNX2-201ENST00000379516 LYG1Q8N1E2 194 aa12.4□□□□□ -0.42
SNX2-201ENST00000379516 STPG2Q8N412 459 aa12.4□□□□□ -0.42
SNX2-201ENST00000379516 H1FXQ92522 213 aaKnown RBP12.4□□□□□ -0.42
SNX2-201ENST00000379516 S1PR3Q99500 378 aa12.4□□□□□ -0.42
SNX2-201ENST00000379516 HSPB7Q9UBY9 170 aa12.4□□□□□ -0.42
SNX2-201ENST00000379516 RPUSD1Q9UJJ7 312 aaKnown RBP12.4□□□□□ -0.42
SNX2-201ENST00000379516 GAB2Q9UQC2 676 aa12.4□□□□□ -0.42
SNX2-201ENST00000379516 SAA2-SAA4A0A096LPE2 208 aa12.4□□□□□ -0.43
SNX2-201ENST00000379516 METTL15P1P0C7V9 234 aa12.4□□□□□ -0.43
SNX2-201ENST00000379516 SAA2P0DJI9 122 aaPredicted RBP12.4□□□□□ -0.43
SNX2-201ENST00000379516 ERVFRD-1P60508 538 aa12.4□□□□□ -0.43
SNX2-201ENST00000379516 TFF3Q07654 80 aa12.4□□□□□ -0.43
SNX2-201ENST00000379516 SPANXN5Q5MJ07 72 aa12.4□□□□□ -0.43
SNX2-201ENST00000379516 ZNF439Q8NDP4 499 aa12.4□□□□□ -0.43
SNX2-201ENST00000379516 BPIFCQ8NFQ6 507 aa12.4□□□□□ -0.43
SNX2-201ENST00000379516 NARS2Q96I59 477 aaKnown RBP12.4□□□□□ -0.43
SNX2-201ENST00000379516 GAL3ST2Q9H3Q3 398 aa12.4□□□□□ -0.43
SNX2-201ENST00000379516 PARP11Q9NR21 331 aa12.4□□□□□ -0.43
SNX2-201ENST00000379516 PKDREJQ9NTG1 2253 aa12.39□□□□□ -0.43
SNX2-201ENST00000379516 NUDT19A8MXV4 375 aa12.39□□□□□ -0.43
SNX2-201ENST00000379516 SCO1O75880 301 aa12.39□□□□□ -0.43
SNX2-201ENST00000379516 DANCRP0C864 163 aa12.39□□□□□ -0.43
SNX2-201ENST00000379516 ATP6V0CP27449 155 aa12.39□□□□□ -0.43
SNX2-201ENST00000379516 LOXP28300 417 aaPredicted RBP12.39□□□□□ -0.43
SNX2-201ENST00000379516 TAS2R30P59541 319 aa12.39□□□□□ -0.43
SNX2-201ENST00000379516 MRPS11P82912 194 aaKnown RBP12.39□□□□□ -0.43
SNX2-201ENST00000379516 TMEM30BQ3MIR4 351 aa12.39□□□□□ -0.43
SNX2-201ENST00000379516 TMEM200BQ69YZ2 307 aa12.39□□□□□ -0.43
SNX2-201ENST00000379516 UQCC3Q6UW78 93 aa12.39□□□□□ -0.43
SNX2-201ENST00000379516 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.39□□□□□ -0.43
SNX2-201ENST00000379516 ATP5SQ99766 215 aa12.39□□□□□ -0.43
SNX2-201ENST00000379516 CTSZQ9UBR2 303 aa12.39□□□□□ -0.43
SNX2-201ENST00000379516 NBASA2RRP1 2371 aa12.38□□□□□ -0.43
SNX2-201ENST00000379516 LYNX1G3V0Z9 82 aa12.38□□□□□ -0.43
SNX2-201ENST00000379516 DVL1O14640 695 aa12.38□□□□□ -0.43
SNX2-201ENST00000379516 PRH1P02810 166 aa12.38□□□□□ -0.43
SNX2-201ENST00000379516 LYNX1P0DP58 116 aa12.38□□□□□ -0.43
SNX2-201ENST00000379516 CCL3L1P16619 93 aa12.38□□□□□ -0.43
SNX2-201ENST00000379516 AKR1C1Q04828 323 aa12.38□□□□□ -0.43
SNX2-201ENST00000379516 PJVKQ0ZLH3 352 aa12.38□□□□□ -0.43
SNX2-201ENST00000379516 IL34Q6ZMJ4 242 aa12.38□□□□□ -0.43
SNX2-201ENST00000379516 TMEM182Q6ZP80 229 aaPredicted RBP12.38□□□□□ -0.43
SNX2-201ENST00000379516 SSX9Q7RTT3 188 aa12.38□□□□□ -0.43
SNX2-201ENST00000379516 ZNF714Q96N38 554 aa12.38□□□□□ -0.43
SNX2-201ENST00000379516 CACFD1Q9UGQ2 172 aa12.38□□□□□ -0.43
SNX2-201ENST00000379516 RFNGQ9Y644 331 aa12.38□□□□□ -0.43
SNX2-201ENST00000379516 RBFOX2O43251 390 aaKnown RBP eCLIP12.38□□□□□ -0.43
SNX2-201ENST00000379516 BTNL8Q6UX41 500 aa12.38□□□□□ -0.43
SNX2-201ENST00000379516 OR2G3Q8NGZ4 309 aa12.38□□□□□ -0.43
SNX2-201ENST00000379516 ZNF251Q9BRH9 671 aa12.38□□□□□ -0.43
SNX2-201ENST00000379516 TMEM204Q9BSN7 226 aa12.38□□□□□ -0.43
SNX2-201ENST00000379516 NARFLQ9H6Q4 476 aa12.38□□□□□ -0.43
SNX2-201ENST00000379516 NDUFA2O43678 99 aa12.37□□□□□ -0.43
SNX2-201ENST00000379516 C1QL1O75973 258 aa12.37□□□□□ -0.43
SNX2-201ENST00000379516 DFFBO76075 338 aa12.37□□□□□ -0.43
SNX2-201ENST00000379516 OR9G9P0C7N8 305 aa12.37□□□□□ -0.43
SNX2-201ENST00000379516 COL8A2P25067 703 aa12.37□□□□□ -0.43
SNX2-201ENST00000379516 KIR2DS2P43631 304 aa12.37□□□□□ -0.43
SNX2-201ENST00000379516 CAMLGP49069 296 aa12.37□□□□□ -0.43
SNX2-201ENST00000379516 FHITP49789 147 aa12.37□□□□□ -0.43
SNX2-201ENST00000379516 RAB5CP51148 216 aa12.37□□□□□ -0.43
SNX2-201ENST00000379516 F2RL1P55085 397 aa12.37□□□□□ -0.43
SNX2-201ENST00000379516 SRSF3P84103 164 aaKnown RBP12.37□□□□□ -0.43
SNX2-201ENST00000379516 SLC25A48Q6ZT89 311 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms