RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 DHRS11Q6UWP2 260 aa9.36□□□□□ -0.91
DEPDC4-202ENST00000378244 AKR1E2Q96JD6 320 aa9.36□□□□□ -0.91
DEPDC4-202ENST00000378244 RBM14Q96PK6 669 aaKnown RBP9.36□□□□□ -0.91
DEPDC4-202ENST00000378244 NPFFR1Q9GZQ6 430 aa9.36□□□□□ -0.91
DEPDC4-202ENST00000378244 LINC00473A8K010 186 aa9.35□□□□□ -0.91
DEPDC4-202ENST00000378244 H0YJW9 148 aa9.35□□□□□ -0.91
DEPDC4-202ENST00000378244 CTDSPLO15194 276 aa9.35□□□□□ -0.91
DEPDC4-202ENST00000378244 OR2F2O95006 317 aa9.35□□□□□ -0.91
DEPDC4-202ENST00000378244 RAB3DO95716 219 aa9.35□□□□□ -0.91
DEPDC4-202ENST00000378244 HKR1P10072 659 aa9.35□□□□□ -0.91
DEPDC4-202ENST00000378244 MMDQ15546 238 aa9.35□□□□□ -0.91
DEPDC4-202ENST00000378244 ARSJQ5FYB0 599 aaPredicted RBP9.35□□□□□ -0.91
DEPDC4-202ENST00000378244 STEAP1BQ6NZ63 245 aa9.35□□□□□ -0.91
DEPDC4-202ENST00000378244 THNSL2Q86YJ6 484 aa9.35□□□□□ -0.91
DEPDC4-202ENST00000378244 RAB18Q9NP72 206 aa9.35□□□□□ -0.91
DEPDC4-202ENST00000378244 RABL2AQ9UBK7 228 aaPredicted RBP9.35□□□□□ -0.91
DEPDC4-202ENST00000378244 AMY1AP04745 511 aa9.34□□□□□ -0.91
DEPDC4-202ENST00000378244 AMY2AP04746 511 aa9.34□□□□□ -0.91
DEPDC4-202ENST00000378244 ETV6P41212 452 aa9.34□□□□□ -0.91
DEPDC4-202ENST00000378244 TAS2R19P59542 299 aa9.34□□□□□ -0.91
DEPDC4-202ENST00000378244 C21orf62-AS1Q17RA5 79 aa9.34□□□□□ -0.91
DEPDC4-202ENST00000378244 ZNF818PQ6ZRF7 136 aa9.34□□□□□ -0.91
DEPDC4-202ENST00000378244 OR5AN1Q8NGI8 311 aa9.34□□□□□ -0.91
DEPDC4-202ENST00000378244 OR4C13Q8NGP0 309 aa9.34□□□□□ -0.91
DEPDC4-202ENST00000378244 RBMX2Q9Y388 322 aaKnown RBP9.34□□□□□ -0.91
DEPDC4-202ENST00000378244 OR5H14A6NHG9 310 aa9.34□□□□□ -0.91
DEPDC4-202ENST00000378244 DUTP33316 252 aaKnown RBP9.34□□□□□ -0.91
DEPDC4-202ENST00000378244 RPL30P62888 115 aaKnown RBP9.34□□□□□ -0.91
DEPDC4-202ENST00000378244 FAM71F2Q6NXP2 309 aa9.34□□□□□ -0.91
DEPDC4-202ENST00000378244 KCTD9Q7L273 389 aa9.34□□□□□ -0.91
DEPDC4-202ENST00000378244 TMEM229BQ8NBD8 167 aa9.34□□□□□ -0.91
DEPDC4-202ENST00000378244 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.34□□□□□ -0.91
DEPDC4-202ENST00000378244 LINC01006Q8NI28 216 aa9.34□□□□□ -0.91
DEPDC4-202ENST00000378244 SLC35D1Q9NTN3 355 aa9.34□□□□□ -0.91
DEPDC4-202ENST00000378244 MCUBQ9NWR8 336 aa9.34□□□□□ -0.91
DEPDC4-202ENST00000378244 WASHC3Q9Y3C0 194 aa9.34□□□□□ -0.91
DEPDC4-202ENST00000378244 LINC00854A0A1B0GVQ3 168 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 APOA2P02652 100 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 CSF1P09603 554 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 PI3P19957 117 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 GNRHRP30968 328 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 MC5RP33032 325 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 EBI3Q14213 229 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 VAX1Q5SQQ9 334 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 LIAT1Q6ZQX7 453 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 BVESQ8NE79 360 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 TCTEX1D2Q8WW35 142 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 MOB3AQ96BX8 217 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 MOB4Q9Y3A3 225 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 GSTZ1O43708 216 aaPredicted RBP9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 FCGR3BO75015 233 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 PPP5CP53041 499 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 RPS16P62249 146 aaKnown RBP9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 BAK1Q16611 211 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 PHLDA2Q53GA4 152 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 ACTBL2Q562R1 376 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 AWAT1Q58HT5 328 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 AADACL3Q5VUY0 350 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 C11orf88Q6PI97 169 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 OR4C16Q8NGL9 310 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 OR4F5Q8NH21 305 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 OR51H1Q8NH63 302 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 OR2T6Q8NHC8 308 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 SRRQ9GZT4 340 aa9.33□□□□□ -0.92
DEPDC4-202ENST00000378244 ANKRD20A5PA0PJZ0 165 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 CRYZL1O95825 349 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 AKAIN1P0CW23 69 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 THBS3P49746 956 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 RPL15P61313 204 aaKnown RBP9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 FOXL1Q12952 345 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 HIST2H2BDQ6DRA6 164 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 MFSD4AQ8N468 514 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 TOMM5Q8N4H5 51 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 Q8N6K4 173 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 C5orf56Q8N8D9 126 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 FLYWCH2Q96CP2 140 aaKnown RBP9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 PRSS22Q9GZN4 317 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 FXYD6Q9H0Q3 95 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 ZNF702PQ9H963 129 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 PLSCR3Q9NRY6 295 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 LINC00527Q9UJ94 153 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 GAB2Q9UQC2 676 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 RNF114Q9Y508 228 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 TSPAN9O75954 239 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 SLC22A5O76082 557 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 CD74P04233 296 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 RLN1P04808 185 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 PGAM2P15259 253 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 TBPP20226 339 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 SSBP1Q04837 148 aaKnown RBP9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 SRSF4Q08170 494 aaKnown RBP9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 PLGLAQ15195 96 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 ZNF57Q68EA5 555 aaPredicted RBP9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 ARRDC1Q8N5I2 433 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 OR51S1Q8NGJ8 323 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 TRIM63Q969Q1 353 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 BEX1Q9HBH7 125 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 PTTG2Q9NZH5 202 aa9.32□□□□□ -0.92
DEPDC4-202ENST00000378244 TMEM89A2RUT3 159 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 LINC01548A6NM66 108 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms