RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 MOGAT2Q3SYC2 334 aa16.28■□□□□ 0.2
VSX1-201ENST00000376707 SPARTQ8N0X7 666 aa16.28■□□□□ 0.2
VSX1-201ENST00000376707 OR4A4PQ8NGN8 299 aa16.28■□□□□ 0.2
VSX1-201ENST00000376707 OR10R2Q8NGX6 335 aa16.28■□□□□ 0.2
VSX1-201ENST00000376707 DLX4Q92988 240 aaPredicted RBP16.28■□□□□ 0.2
VSX1-201ENST00000376707 TSNAXQ99598 290 aaKnown RBP16.28■□□□□ 0.2
VSX1-201ENST00000376707 SMAD5-AS1Q9Y6J3 95 aa16.28■□□□□ 0.2
VSX1-201ENST00000376707 KMT2CQ8NEZ4 4911 aaKnown RBP16.28■□□□□ 0.2
VSX1-201ENST00000376707 NBEAL2Q6ZNJ1 2754 aa16.27■□□□□ 0.2
VSX1-201ENST00000376707 RAB27BO00194 218 aa16.27■□□□□ 0.2
VSX1-201ENST00000376707 MFNGO00587 321 aa16.27■□□□□ 0.2
VSX1-201ENST00000376707 DIRAS3O95661 229 aa16.27■□□□□ 0.2
VSX1-201ENST00000376707 APOA2P02652 100 aa16.27■□□□□ 0.2
VSX1-201ENST00000376707 TFAP2AP05549 437 aa16.27■□□□□ 0.2
VSX1-201ENST00000376707 CD3GP09693 182 aa16.27■□□□□ 0.2
VSX1-201ENST00000376707 SERPINB10P48595 397 aa16.27■□□□□ 0.2
VSX1-201ENST00000376707 MRPS15P82914 257 aaKnown RBP16.27■□□□□ 0.2
VSX1-201ENST00000376707 AKIRIN2Q53H80 203 aa16.27■□□□□ 0.2
VSX1-201ENST00000376707 ZNF562Q6V9R5 426 aa16.27■□□□□ 0.2
VSX1-201ENST00000376707 NR2C2APQ86WQ0 139 aa16.27■□□□□ 0.2
VSX1-201ENST00000376707 MS4A10Q96PG2 267 aa16.27■□□□□ 0.2
VSX1-201ENST00000376707 RDH8Q9NYR8 311 aa16.27■□□□□ 0.2
VSX1-201ENST00000376707 TENM3Q9P273 2699 aa16.27■□□□□ 0.19
VSX1-201ENST00000376707 IGHV4OR15-8A0A075B7B6 117 aa16.26■□□□□ 0.19
VSX1-201ENST00000376707 A0A087WW49 117 aa16.26■□□□□ 0.19
VSX1-201ENST00000376707 FABP7O15540 132 aa16.26■□□□□ 0.19
VSX1-201ENST00000376707 SPDEFO95238 335 aa16.26■□□□□ 0.19
VSX1-201ENST00000376707 CA2P00918 260 aa16.26■□□□□ 0.19
VSX1-201ENST00000376707 IGHV3-11P01762 117 aa16.26■□□□□ 0.19
VSX1-201ENST00000376707 IGKV1-16P04430 117 aa16.26■□□□□ 0.19
VSX1-201ENST00000376707 FCGR3AP08637 254 aa16.26■□□□□ 0.19
VSX1-201ENST00000376707 GADD45AP24522 165 aa16.26■□□□□ 0.19
VSX1-201ENST00000376707 FGF9P31371 208 aaPredicted RBP16.26■□□□□ 0.19
VSX1-201ENST00000376707 TPPP2P59282 170 aa16.26■□□□□ 0.19
VSX1-201ENST00000376707 C22orf42Q6IC83 251 aa16.26■□□□□ 0.19
VSX1-201ENST00000376707 PDPNQ86YL7 162 aa16.26■□□□□ 0.19
VSX1-201ENST00000376707 ZNF383Q8NA42 475 aa16.26■□□□□ 0.19
VSX1-201ENST00000376707 LFNGQ8NES3 379 aa16.26■□□□□ 0.19
VSX1-201ENST00000376707 CABLES2Q9BTV7 478 aa16.26■□□□□ 0.19
VSX1-201ENST00000376707 YTHDF1Q9BYJ9 559 aaKnown RBP16.26■□□□□ 0.19
VSX1-201ENST00000376707 Q9H521 79 aa16.26■□□□□ 0.19
VSX1-201ENST00000376707 M0R1X1 148 aa16.25■□□□□ 0.19
VSX1-201ENST00000376707 HIST1H1DP16402 221 aaKnown RBP16.25■□□□□ 0.19
VSX1-201ENST00000376707 LINC00205P59089 165 aa16.25■□□□□ 0.19
VSX1-201ENST00000376707 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.25■□□□□ 0.19
VSX1-201ENST00000376707 FCGR1BQ92637 280 aa16.25■□□□□ 0.19
VSX1-201ENST00000376707 ARPC1AQ92747 370 aa16.25■□□□□ 0.19
VSX1-201ENST00000376707 FLYWCH2Q96CP2 140 aaKnown RBP16.25■□□□□ 0.19
VSX1-201ENST00000376707 SLA2Q9H6Q3 261 aa16.25■□□□□ 0.19
VSX1-201ENST00000376707 TPSG1Q9NRR2 321 aa16.25■□□□□ 0.19
VSX1-201ENST00000376707 TRBV6-7A0A0A0MS04 114 aa16.24■□□□□ 0.19
VSX1-201ENST00000376707 A0A0B4J203 849 aa16.24■□□□□ 0.19
VSX1-201ENST00000376707 METTL21EPA6NDL7 271 aa16.24■□□□□ 0.19
VSX1-201ENST00000376707 SNRPBP14678 240 aaKnown RBP16.24■□□□□ 0.19
VSX1-201ENST00000376707 GNB3P16520 340 aa16.24■□□□□ 0.19
VSX1-201ENST00000376707 SRSF7Q16629 238 aaKnown RBP eCLIP16.24■□□□□ 0.19
VSX1-201ENST00000376707 GRPEL2Q8TAA5 225 aa16.24■□□□□ 0.19
VSX1-201ENST00000376707 SLC35D1Q9NTN3 355 aa16.24■□□□□ 0.19
VSX1-201ENST00000376707 BET1O15155 118 aa16.23■□□□□ 0.19
VSX1-201ENST00000376707 SLC25A17O43808 307 aa16.23■□□□□ 0.19
VSX1-201ENST00000376707 HSPB1P04792 205 aaKnown RBP16.23■□□□□ 0.19
VSX1-201ENST00000376707 OR8U9P0C7N5 309 aa16.23■□□□□ 0.19
VSX1-201ENST00000376707 GSTT2P0CG29 244 aa16.23■□□□□ 0.19
VSX1-201ENST00000376707 GSTT2BP0CG30 244 aa16.23■□□□□ 0.19
VSX1-201ENST00000376707 SPNP16150 400 aa16.23■□□□□ 0.19
VSX1-201ENST00000376707 PITPNAQ00169 270 aa16.23■□□□□ 0.19
VSX1-201ENST00000376707 FXYD3Q14802 87 aa16.23■□□□□ 0.19
VSX1-201ENST00000376707 IGSF11Q5DX21 431 aa16.23■□□□□ 0.19
VSX1-201ENST00000376707 ACSM6Q6P461 480 aa16.23■□□□□ 0.19
VSX1-201ENST00000376707 Q6ZS49 121 aa16.23■□□□□ 0.19
VSX1-201ENST00000376707 OR6Q1Q8NGQ2 317 aa16.23■□□□□ 0.19
VSX1-201ENST00000376707 TXNL4BQ9NX01 149 aaKnown RBP16.23■□□□□ 0.19
VSX1-201ENST00000376707 NOTOA8MTQ0 251 aa16.22■□□□□ 0.19
VSX1-201ENST00000376707 TRGV3P03979 118 aa16.22■□□□□ 0.19
VSX1-201ENST00000376707 PSMB9P28065 219 aa16.22■□□□□ 0.19
VSX1-201ENST00000376707 OR10J5Q8NHC4 309 aa16.22■□□□□ 0.19
VSX1-201ENST00000376707 RHOVQ96L33 236 aa16.22■□□□□ 0.19
VSX1-201ENST00000376707 OR4C12Q96R67 309 aa16.22■□□□□ 0.19
VSX1-201ENST00000376707 CENPOQ9BU64 300 aa16.22■□□□□ 0.19
VSX1-201ENST00000376707 OR2D2Q9H210 308 aa16.22■□□□□ 0.19
VSX1-201ENST00000376707 ZNF355PQ9NSJ1 428 aa16.22■□□□□ 0.19
VSX1-201ENST00000376707 STUB1Q9UNE7 303 aa16.22■□□□□ 0.19
VSX1-201ENST00000376707 A0A075B6Q4 140 aa16.21■□□□□ 0.19
VSX1-201ENST00000376707 ARPC1BO15143 372 aaKnown RBP16.21■□□□□ 0.19
VSX1-201ENST00000376707 CNIH1O95406 144 aa16.21■□□□□ 0.19
VSX1-201ENST00000376707 ARL6IP1Q15041 203 aa16.21■□□□□ 0.19
VSX1-201ENST00000376707 TPRA1Q86W33 373 aa16.21■□□□□ 0.19
VSX1-201ENST00000376707 ZNF230Q9UIE0 474 aaPredicted RBP16.21■□□□□ 0.19
VSX1-201ENST00000376707 GP9P14770 177 aa16.2■□□□□ 0.18
VSX1-201ENST00000376707 LGALS7P47929 136 aa16.2■□□□□ 0.18
VSX1-201ENST00000376707 CBX3Q13185 183 aa16.2■□□□□ 0.18
VSX1-201ENST00000376707 POC5Q8NA72 575 aa16.2■□□□□ 0.18
VSX1-201ENST00000376707 ATG5Q9H1Y0 275 aa16.2■□□□□ 0.18
VSX1-201ENST00000376707 SDHAF2Q9NX18 166 aa16.2■□□□□ 0.18
VSX1-201ENST00000376707 C13orf42A0A1B0GVH6 325 aa16.19■□□□□ 0.18
VSX1-201ENST00000376707 SMIM30A4D0T7 59 aa16.19■□□□□ 0.18
VSX1-201ENST00000376707 DTYMKP23919 212 aa16.19■□□□□ 0.18
VSX1-201ENST00000376707 ARFRP1Q13795 201 aa16.19■□□□□ 0.18
VSX1-201ENST00000376707 ZNF773Q6PK81 442 aa16.19■□□□□ 0.18
VSX1-201ENST00000376707 OR5T1Q8NG75 326 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms