RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 ASCL5Q7RTU5 278 aa10.62□□□□□ -0.71
NPLOC4-202ENST00000374747 UCN2Q96RP3 112 aa10.62□□□□□ -0.71
NPLOC4-202ENST00000374747 PARD6GQ9BYG4 376 aaPredicted RBP10.62□□□□□ -0.71
NPLOC4-202ENST00000374747 DMRT1Q9Y5R6 373 aa10.62□□□□□ -0.71
NPLOC4-202ENST00000374747 A0A0U1RQV5 110 aa10.61□□□□□ -0.71
NPLOC4-202ENST00000374747 HKR1P10072 659 aa10.61□□□□□ -0.71
NPLOC4-202ENST00000374747 RAB37Q96AX2 223 aa10.61□□□□□ -0.71
NPLOC4-202ENST00000374747 PPP1CCP36873 323 aaKnown RBP10.61□□□□□ -0.71
NPLOC4-202ENST00000374747 CDX1P47902 265 aaPredicted RBP10.61□□□□□ -0.71
NPLOC4-202ENST00000374747 UQCRFS1P47985 274 aa10.61□□□□□ -0.71
NPLOC4-202ENST00000374747 HOXA4Q00056 320 aaPredicted RBP10.61□□□□□ -0.71
NPLOC4-202ENST00000374747 SOSTQ9BQB4 213 aa10.61□□□□□ -0.71
NPLOC4-202ENST00000374747 A0A1W2PRD5 423 aa10.61□□□□□ -0.71
NPLOC4-202ENST00000374747 A0A1W2PRF3 423 aa10.61□□□□□ -0.71
NPLOC4-202ENST00000374747 A0A1W2PRM7 423 aa10.61□□□□□ -0.71
NPLOC4-202ENST00000374747 CD74P04233 296 aa10.61□□□□□ -0.71
NPLOC4-202ENST00000374747 F2RL2O00254 374 aa10.61□□□□□ -0.71
NPLOC4-202ENST00000374747 HYPMO75409 117 aa10.61□□□□□ -0.71
NPLOC4-202ENST00000374747 P2RY4P51582 365 aa10.61□□□□□ -0.71
NPLOC4-202ENST00000374747 CD200R1LQ6Q8B3 271 aa10.61□□□□□ -0.71
NPLOC4-202ENST00000374747 SLC25A40Q8TBP6 338 aa10.61□□□□□ -0.71
NPLOC4-202ENST00000374747 TGIF2-C20orf24A0A0A6YYL0 155 aa10.6□□□□□ -0.71
NPLOC4-202ENST00000374747 FAM90A27PA6NNH2 459 aa10.6□□□□□ -0.71
NPLOC4-202ENST00000374747 H0YL77 283 aa10.6□□□□□ -0.71
NPLOC4-202ENST00000374747 EIF3GO75821 320 aaKnown RBP eCLIP10.6□□□□□ -0.71
NPLOC4-202ENST00000374747 LRRC75BQ2VPJ9 315 aa10.6□□□□□ -0.71
NPLOC4-202ENST00000374747 MUC15Q8N387 334 aa10.6□□□□□ -0.71
NPLOC4-202ENST00000374747 TTTY12Q9BZ98 90 aa10.6□□□□□ -0.71
NPLOC4-202ENST00000374747 CD3EP07766 207 aa10.6□□□□□ -0.71
NPLOC4-202ENST00000374747 ZNF502Q8TBZ5 544 aa10.6□□□□□ -0.71
NPLOC4-202ENST00000374747 SPSB2Q99619 263 aa10.6□□□□□ -0.71
NPLOC4-202ENST00000374747 TMUB1Q9BVT8 246 aa10.6□□□□□ -0.71
NPLOC4-202ENST00000374747 CELA2AP08217 269 aa10.6□□□□□ -0.71
NPLOC4-202ENST00000374747 ZNF735P0CB33 412 aa10.6□□□□□ -0.71
NPLOC4-202ENST00000374747 UCNP55089 124 aa10.6□□□□□ -0.71
NPLOC4-202ENST00000374747 TCTAP57738 103 aa10.6□□□□□ -0.71
NPLOC4-202ENST00000374747 NHLRC3Q5JS37 347 aa10.6□□□□□ -0.71
NPLOC4-202ENST00000374747 FGF11Q92914 225 aa10.6□□□□□ -0.71
NPLOC4-202ENST00000374747 ZNF71Q9NQZ8 489 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-202ENST00000374747 FRMPD3Q5JV73 1810 aa10.6□□□□□ -0.71
NPLOC4-202ENST00000374747 FAM216AQ8WUB2 273 aa10.6□□□□□ -0.71
NPLOC4-202ENST00000374747 SDHCQ99643 169 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-202ENST00000374747 MRPL18Q9H0U6 180 aaKnown RBP10.6□□□□□ -0.71
NPLOC4-202ENST00000374747 MPTX1A8MV57 137 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 IGKV3-11P04433 115 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 TWIST1Q15672 202 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 SLC25A38Q96DW6 304 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 HEXA-AS1Q9H8Q6 139 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 KCNE5Q9UJ90 142 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 TMEM189A5PLL7 270 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 LEPROTL1O95214 131 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 COX6CP09669 75 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 HIKESHIQ53FT3 197 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 INO80CQ6PI98 192 aaPredicted RBP10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 DHRS7CA6NNS2 312 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 KBTBD11O94819 623 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 COX6A1P12074 109 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 SLC25A34Q6PIV7 304 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 TAF15Q92804 592 aaKnown RBP eCLIP10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 TREM2Q9NZC2 230 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 ASXL3Q9C0F0 2248 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 PCOLCEQ15113 449 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 C3AR1Q16581 482 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 TEX30Q5JUR7 227 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 CISD1Q9NZ45 108 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 A0A0J9YW62 118 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 CSRP2Q16527 193 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 FAM27BQ5VT28 67 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 OR11H4Q8NGC9 324 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 NUDT16L1Q9BRJ7 211 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 IL36RNQ9UBH0 155 aa10.59□□□□□ -0.71
NPLOC4-202ENST00000374747 AHCTF1Q8WYP5 2266 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 PLXNB3Q9ULL4 1909 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 A0A0B4J293 547 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 LOC107984156A0A0G2JMH3 177 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 FGF12P61328 243 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 ARL17AQ8IVW1 177 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 WNT2BQ93097 391 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 TMEM45BQ96B21 275 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 NPDC1Q9NQX5 325 aaPredicted RBP10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 CDK2AP1O14519 115 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 AGFG2O95081 481 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 AMY1AP04745 511 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 C1orf100Q5SVJ3 147 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 OR2J1Q9GZK6 312 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 HOXD4P09016 255 aaPredicted RBP10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 APELAP0DMC3 54 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 SELENOTP62341 195 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 ROM1Q03395 351 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 WDR25Q64LD2 544 aaPredicted RBP10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 ERASQ7Z444 233 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 AQP3Q92482 292 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 ZNF385AQ96PM9 386 aaKnown RBP10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 SCNM1Q9BWG6 230 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 TBX6O95947 436 aaPredicted RBP10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 H2BFSP57053 126 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 RND3P61587 244 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 COL10A1Q03692 680 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 CEACAM21Q3KPI0 293 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 OR10S1Q8NGN2 331 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms