RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 ZNF732B4DXR9 585 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 HAX1O00165 279 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 WRBO00258 174 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 GEMIN2O14893 280 aaKnown RBP8.63□□□□□ -1.03
COL5A1-202ENST00000371820 WNT9BO14905 357 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 SPRY1O43609 319 aaPredicted RBP8.63□□□□□ -1.03
COL5A1-202ENST00000371820 TCF21O43680 179 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 PITX3O75364 302 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 FOXH1O75593 365 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 LY86O95711 162 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 IFNA17P01571 189 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 OR8U9P0C7N5 309 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 MAS1LP35410 378 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 LPAR6P43657 344 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 RPL23AP62750 156 aaKnown RBP8.63□□□□□ -1.03
COL5A1-202ENST00000371820 ZNF92Q03936 586 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 IL24Q13007 206 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 Q6ZR03 302 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 MOB1BQ7L9L4 216 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 C1orf87Q8N0U7 546 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 OR5D13Q8NGL4 314 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 MAFIPQ8WZ33 124 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 MALSU1Q96EH3 234 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 RAB40CQ96S21 281 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 PKIBQ9C010 78 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 IFT22Q9H7X7 185 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 IGKV1D-8A0A087WSZ0 117 aa8.62□□□□□ -1.03
COL5A1-202ENST00000371820 CXorf65A6NEN9 183 aa8.62□□□□□ -1.03
COL5A1-202ENST00000371820 ANKRD30BLA7E2S9 258 aa8.62□□□□□ -1.03
COL5A1-202ENST00000371820 B4DEV8 164 aa8.62□□□□□ -1.03
COL5A1-202ENST00000371820 ANGPTL7O43827 346 aa8.62□□□□□ -1.03
COL5A1-202ENST00000371820 OR7C1O76099 320 aaPredicted RBP8.62□□□□□ -1.03
COL5A1-202ENST00000371820 IFNA5P01569 189 aa8.62□□□□□ -1.03
COL5A1-202ENST00000371820 IGHV2-70P01814 119 aa8.62□□□□□ -1.03
COL5A1-202ENST00000371820 OR8U8P0C7N1 319 aa8.62□□□□□ -1.03
COL5A1-202ENST00000371820 IRF2P14316 349 aa8.62□□□□□ -1.03
COL5A1-202ENST00000371820 ADCYAP1P18509 176 aa8.62□□□□□ -1.03
COL5A1-202ENST00000371820 AADACP22760 399 aa8.62□□□□□ -1.03
COL5A1-202ENST00000371820 UCP1P25874 307 aa8.62□□□□□ -1.03
COL5A1-202ENST00000371820 TAGLN2P37802 199 aaKnown RBP8.62□□□□□ -1.03
COL5A1-202ENST00000371820 FXYD4P59646 89 aa8.62□□□□□ -1.03
COL5A1-202ENST00000371820 ID3Q02535 119 aa8.62□□□□□ -1.03
COL5A1-202ENST00000371820 MZT1Q08AG7 82 aa8.62□□□□□ -1.03
COL5A1-202ENST00000371820 LYZL2Q7Z4W2 148 aa8.62□□□□□ -1.03
COL5A1-202ENST00000371820 BOLLQ8N9W6 283 aaKnown RBP8.62□□□□□ -1.03
COL5A1-202ENST00000371820 ERGIC1Q969X5 290 aa8.62□□□□□ -1.03
COL5A1-202ENST00000371820 SLAMF9Q96A28 289 aa8.62□□□□□ -1.03
COL5A1-202ENST00000371820 MEGF10Q96KG7 1140 aa8.62□□□□□ -1.03
COL5A1-202ENST00000371820 RPS10P5Q9NQ39 176 aa8.62□□□□□ -1.03
COL5A1-202ENST00000371820 RCL1Q9Y2P8 373 aaKnown RBP8.62□□□□□ -1.03
COL5A1-202ENST00000371820 IGKV1-27A0A075B6S5 117 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 PPIAL4EA0A075B759 164 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 PPIAL4CA0A0B4J2A2 164 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 COLCA2A8K830 154 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 PPIAL4DF5H284 164 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 H0Y980 276 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 TMEM178BH3BS89 294 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 TUSC2O75896 110 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 FSTL3O95633 263 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 NAPSAO96009 420 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 CRYBA1P05813 215 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 PPIAL4FP0DN26 164 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 NPBWR1P48145 328 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 AKR1C2P52895 323 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 TAS2R30P59541 319 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 GNG3P63215 75 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 EWSR1Q01844 656 aaKnown RBP eCLIP8.61□□□□□ -1.03
COL5A1-202ENST00000371820 AKR1C1Q04828 323 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 ZNF616Q08AN1 781 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 PRDX4Q13162 271 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 CLINT1Q14677 625 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 SOHLH1Q5JUK2 328 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 SPIN3Q5JUX0 258 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 SLC25A26Q70HW3 274 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 STX12Q86Y82 276 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 C1QL4Q86Z23 238 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 SELENOHQ8IZQ5 122 aaKnown RBP8.61□□□□□ -1.03
COL5A1-202ENST00000371820 TCTEX1D1Q8N7M0 179 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 ZBTB34Q8NCN2 500 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 BHLHE23Q8NDY6 225 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 OR10G4Q8NGN3 311 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 OR11L1Q8NGX0 322 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 OR2AE1Q8NHA4 323 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 TCTEX1D2Q8WW35 142 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 LSM10Q969L4 123 aaKnown RBP8.61□□□□□ -1.03
COL5A1-202ENST00000371820 PATZ1Q9HBE1 687 aaKnown RBP8.61□□□□□ -1.03
COL5A1-202ENST00000371820 GCM1Q9NP62 436 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 SIRT7Q9NRC8 400 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 LYRM2Q9NU23 88 aaPredicted RBP8.61□□□□□ -1.03
COL5A1-202ENST00000371820 MMP24Q9Y5R2 645 aa8.61□□□□□ -1.03
COL5A1-202ENST00000371820 A0A087WWC5 75 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 TRAV1-1A0A0B4J248 108 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 IGKV1-12A0A0C4DH73 117 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.6□□□□□ -1.03
COL5A1-202ENST00000371820 A0A1B0GWJ7 208 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 C7orf77A4D0Y5 90 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 ZNF98A6NK75 572 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 CD300LBA8K4G0 201 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 NPIPB11E5RHQ5 1161 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 DEGS1O15121 323 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms