RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ZPLD1Q8TCW7 415 aa13.5□□□□□ -0.25
NUCKS1-201ENST00000367142 KIF13AQ9H1H9 1805 aa13.5□□□□□ -0.25
NUCKS1-201ENST00000367142 HSPE1P61604 102 aaKnown RBP13.5□□□□□ -0.25
NUCKS1-201ENST00000367142 TGIF1Q15583 401 aa13.5□□□□□ -0.25
NUCKS1-201ENST00000367142 ZNF345Q14585 488 aa13.5□□□□□ -0.25
NUCKS1-201ENST00000367142 SAXO1Q8IYX7 474 aa13.5□□□□□ -0.25
NUCKS1-201ENST00000367142 V9GYH0 126 aa13.5□□□□□ -0.25
NUCKS1-201ENST00000367142 CEACAM4O75871 244 aa13.5□□□□□ -0.25
NUCKS1-201ENST00000367142 AMY1AP04745 511 aa13.5□□□□□ -0.25
NUCKS1-201ENST00000367142 SUMO2P61956 95 aaKnown RBP13.5□□□□□ -0.25
NUCKS1-201ENST00000367142 JOSD1Q15040 202 aaPredicted RBP13.5□□□□□ -0.25
NUCKS1-201ENST00000367142 TMEM177Q53S58 311 aa13.5□□□□□ -0.25
NUCKS1-201ENST00000367142 VAX1Q5SQQ9 334 aa13.5□□□□□ -0.25
NUCKS1-201ENST00000367142 SLC25A45Q8N413 288 aa13.5□□□□□ -0.25
NUCKS1-201ENST00000367142 OR51M1Q9H341 326 aa13.5□□□□□ -0.25
NUCKS1-201ENST00000367142 H7C1H1 209 aa13.5□□□□□ -0.25
NUCKS1-201ENST00000367142 JMJD8Q96S16 334 aa13.5□□□□□ -0.25
NUCKS1-201ENST00000367142 A0A087X0M5 115 aa13.49□□□□□ -0.25
NUCKS1-201ENST00000367142 A0A1B0GX30 115 aa13.49□□□□□ -0.25
NUCKS1-201ENST00000367142 CDX1P47902 265 aaPredicted RBP13.49□□□□□ -0.25
NUCKS1-201ENST00000367142 SLC16A13Q7RTY0 426 aa13.49□□□□□ -0.25
NUCKS1-201ENST00000367142 NEU4Q8WWR8 484 aaPredicted RBP13.49□□□□□ -0.25
NUCKS1-201ENST00000367142 TMEM70Q9BUB7 260 aa13.49□□□□□ -0.25
NUCKS1-201ENST00000367142 HSF4Q9ULV5 492 aa13.49□□□□□ -0.25
NUCKS1-201ENST00000367142 LMX1BO60663 402 aa13.49□□□□□ -0.25
NUCKS1-201ENST00000367142 ATP1A1-AS1Q5TC04 95 aa13.49□□□□□ -0.25
NUCKS1-201ENST00000367142 NDUFB4O95168 129 aa13.49□□□□□ -0.25
NUCKS1-201ENST00000367142 CSRP2Q16527 193 aa13.49□□□□□ -0.25
NUCKS1-201ENST00000367142 RGP1Q92546 391 aaPredicted RBP13.49□□□□□ -0.25
NUCKS1-201ENST00000367142 HIST1H4GQ99525 98 aa13.49□□□□□ -0.25
NUCKS1-201ENST00000367142 PCOLCEQ15113 449 aa13.49□□□□□ -0.25
NUCKS1-201ENST00000367142 REC114Q7Z4M0 266 aa13.49□□□□□ -0.25
NUCKS1-201ENST00000367142 SMDT1Q9H4I9 107 aa13.49□□□□□ -0.25
NUCKS1-201ENST00000367142 HS3ST3B1Q9Y662 390 aa13.49□□□□□ -0.25
NUCKS1-201ENST00000367142 PGLYRP1O75594 196 aaPredicted RBP13.49□□□□□ -0.25
NUCKS1-201ENST00000367142 IGF2P01344 180 aa13.49□□□□□ -0.25
NUCKS1-201ENST00000367142 TRPM3Q9HCF6 1732 aaPredicted RBP13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 NPIPB8E9PQR5 432 aa13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 REG1AP05451 166 aa13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 CACNG7P62955 275 aa13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 GCSAMLQ5JQS6 135 aa13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 MIC13Q5XKP0 118 aa13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 SSBP3Q9BWW4 388 aaPredicted RBP13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 DLL3Q9NYJ7 618 aa13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 ITGB4P16144 1822 aa13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 IGKV3-20P01619 116 aa13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 TCF24Q7RTU0 167 aa13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 GPR61Q9BZJ8 451 aa13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 PAM16Q9Y3D7 125 aa13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 A0A0G2JLM5 398 aa13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 C8orf88P0DMB2 117 aa13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 PTGDSP41222 190 aa13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 ITLN2Q8WWU7 325 aaPredicted RBP13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 FAM168AQ92567 244 aa13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 FAM90A26D6RGX4 464 aa13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 ZNF383Q8NA42 475 aa13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 TUBD1Q9UJT1 453 aa13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 OR51G1Q8NGK1 321 aa13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 SH3BGRL3Q9H299 93 aa13.48□□□□□ -0.25
NUCKS1-201ENST00000367142 ZNHIT1O43257 154 aa13.47□□□□□ -0.25
NUCKS1-201ENST00000367142 MRPL32Q9BYC8 188 aaKnown RBP13.47□□□□□ -0.25
NUCKS1-201ENST00000367142 PILRAQ9UKJ1 303 aa13.47□□□□□ -0.25
NUCKS1-201ENST00000367142 DNAL4O96015 105 aa13.47□□□□□ -0.25
NUCKS1-201ENST00000367142 HLA-DQA1P01909 254 aa13.47□□□□□ -0.25
NUCKS1-201ENST00000367142 COTL1Q14019 142 aa13.47□□□□□ -0.25
NUCKS1-201ENST00000367142 SRSF12Q8WXF0 261 aaKnown RBP13.47□□□□□ -0.25
NUCKS1-201ENST00000367142 TNFRSF18Q9Y5U5 241 aa13.47□□□□□ -0.25
NUCKS1-201ENST00000367142 PEMTQ9UBM1 199 aa13.47□□□□□ -0.25
NUCKS1-201ENST00000367142 FABP2P12104 132 aa13.47□□□□□ -0.25
NUCKS1-201ENST00000367142 ZNF146Q15072 292 aa13.47□□□□□ -0.25
NUCKS1-201ENST00000367142 RUNX1Q01196 453 aa13.47□□□□□ -0.25
NUCKS1-201ENST00000367142 C19orf24Q9BVV8 132 aa13.47□□□□□ -0.25
NUCKS1-201ENST00000367142 TNRC6CQ9HCJ0 1690 aaKnown RBP13.47□□□□□ -0.25
NUCKS1-201ENST00000367142 LOC101059948A0A1B0GTJ6 334 aa13.46□□□□□ -0.25
NUCKS1-201ENST00000367142 FGFRL1Q8N441 504 aa13.46□□□□□ -0.25
NUCKS1-201ENST00000367142 FOXJ2Q9P0K8 574 aa13.46□□□□□ -0.25
NUCKS1-201ENST00000367142 RREB1Q92766 1687 aa13.46□□□□□ -0.25
NUCKS1-201ENST00000367142 CD69Q07108 199 aa13.46□□□□□ -0.25
NUCKS1-201ENST00000367142 PSMB11A5LHX3 300 aa13.46□□□□□ -0.25
NUCKS1-201ENST00000367142 ZNF815PA8K554 130 aa13.46□□□□□ -0.25
NUCKS1-201ENST00000367142 LCN2P80188 198 aa13.46□□□□□ -0.25
NUCKS1-201ENST00000367142 MIXL1Q9H2W2 232 aa13.46□□□□□ -0.25
NUCKS1-201ENST00000367142 EVPLQ92817 2033 aa13.46□□□□□ -0.25
NUCKS1-201ENST00000367142 ZNF831Q5JPB2 1677 aa13.46□□□□□ -0.25
NUCKS1-201ENST00000367142 DUX3Q96PT4 197 aa13.46□□□□□ -0.25
NUCKS1-201ENST00000367142 RCC1P18754 421 aaPredicted RBP13.46□□□□□ -0.26
NUCKS1-201ENST00000367142 C10orf128Q5T292 105 aa13.46□□□□□ -0.26
NUCKS1-201ENST00000367142 NRIP2Q9BQI9 281 aa13.46□□□□□ -0.26
NUCKS1-201ENST00000367142 SRXN1Q9BYN0 137 aa13.46□□□□□ -0.26
NUCKS1-201ENST00000367142 NANOS3P60323 173 aaKnown RBP13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 UNC119Q13432 240 aa13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 RIPPLY2Q5TAB7 128 aa13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 ARID1BQ8NFD5 2236 aaPredicted RBP13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 J3QW42 95 aa13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 CBLN2Q8IUK8 224 aa13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 SELENOHQ8IZQ5 122 aaKnown RBP13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 TMEM252Q8N6L7 170 aa13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 FAM181AQ8N9Y4 354 aa13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 LEAP2Q969E1 77 aa13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 CENPVL1A0A0U1RR11 272 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms