RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ULBP2Q9BZM5 246 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 EIF5A2Q9GZV4 153 aaKnown RBP4.1□□□□□ -1.75
CKS1B-201ENST00000308987 TMEM222Q9H0R3 208 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 RIMS4Q9H426 269 aaPredicted RBP4.1□□□□□ -1.75
CKS1B-201ENST00000308987 WFDC1Q9HC57 220 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 SLC2A9Q9NRM0 540 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 PLEK2Q9NYT0 353 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 KIAA1456Q9P272 454 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 AK3Q9UIJ7 227 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 DKKL1Q9UK85 242 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 SLC7A11Q9UPY5 501 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 MRPS18CQ9Y3D5 142 aaKnown RBP4.1□□□□□ -1.75
CKS1B-201ENST00000308987 TRGV11A0A075B6L2 103 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 A0A096LNT2 108 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 TRBV6-6A0A0A6YYG2 114 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF816-ZNF321PA0A0X1KG74 233 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 KIR2DS1A0A191URI9 304 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 C3orf85A0A1B0GTC6 90 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.09□□□□□ -1.75
CKS1B-201ENST00000308987 FAM230AA0A1W2PPH8 454 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 RBFOX3A6NFN3 312 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 RNF212BA8MTL3 300 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 F5H5K5 113 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 M0R036 132 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 WRBO00258 174 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 MPPED1O15442 326 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 RAMP1O60894 148 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 NDUFS7O75251 213 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 CBR3O75828 277 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 TUSC2O75896 110 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 DFFBO76075 338 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 DIRAS3O95661 229 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 NRASP01111 189 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 PRH1P02810 166 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 FABP1P07148 127 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 SNRNP70P08621 437 aaKnown RBP4.09□□□□□ -1.75
CKS1B-201ENST00000308987 OR8U8P0C7N1 319 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 GABRR1P24046 479 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 UCP1P25874 307 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 KIR2DS4P43632 304 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 NKX2-1P43699 371 aaPredicted RBP4.09□□□□□ -1.75
CKS1B-201ENST00000308987 SULT1A1P50225 295 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 RBM11P57052 281 aaKnown RBP4.09□□□□□ -1.75
CKS1B-201ENST00000308987 SRSF2Q01130 221 aaKnown RBP4.09□□□□□ -1.75
CKS1B-201ENST00000308987 EWSR1Q01844 656 aaKnown RBP eCLIP4.09□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF616Q08AN1 781 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 FABP9Q0Z7S8 132 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 IL24Q13007 206 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 KIR2DS1Q14954 304 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 RNPS1Q15287 305 aaKnown RBP4.09□□□□□ -1.75
CKS1B-201ENST00000308987 KHDC3LQ587J8 217 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF506Q5JVG8 444 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 SLC22A25Q6T423 547 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 HEPN1Q6WQI6 88 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF788Q6ZQV5 615 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 LYZL2Q7Z4W2 148 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 SLC35E3Q7Z769 313 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 DPPA2Q7Z7J5 298 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 LINC00596Q86U02 117 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 FOXRED2Q8IWF2 684 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 OR2C3Q8N628 320 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 ZIC4Q8N9L1 334 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 SUMF2Q8NBJ7 301 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 OR1F12Q8NHA8 337 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 C2CD4CQ8TF44 421 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 MAFIPQ8WZ33 124 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 NEUROG1Q92886 237 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 REEP6Q96HR9 211 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF845Q96IR2 970 aaPredicted RBP4.09□□□□□ -1.75
CKS1B-201ENST00000308987 TMEM204Q9BSN7 226 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 FAAP24Q9BTP7 215 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 PAPOLGQ9BWT3 736 aaKnown RBP4.09□□□□□ -1.75
CKS1B-201ENST00000308987 PARD6GQ9BYG4 376 aaPredicted RBP4.09□□□□□ -1.75
CKS1B-201ENST00000308987 PLK3Q9H4B4 646 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 ELL3Q9HB65 397 aaPredicted RBP4.09□□□□□ -1.75
CKS1B-201ENST00000308987 GSN-AS1Q9NRJ2 163 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 GPR173Q9NS66 373 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 LYRM2Q9NU23 88 aaPredicted RBP4.09□□□□□ -1.75
CKS1B-201ENST00000308987 TMEM242Q9NWH2 141 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 RNF150Q9ULK6 438 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 RCL1Q9Y2P8 373 aaKnown RBP4.09□□□□□ -1.75
CKS1B-201ENST00000308987 VWFP04275 2813 aa4.09□□□□□ -1.75
CKS1B-201ENST00000308987 IGKV1-27A0A075B6S5 117 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 hCG_38984A0A1B0GV85 526 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 A0A1W2PPH5 198 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 C5orf63A6NC05 138 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 RPL36A-HNRNPH2H7BZ11 118 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 AGPAT2O15120 278 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 PHF1O43189 567 aaPredicted RBP4.08□□□□□ -1.76
CKS1B-201ENST00000308987 PPIHO43447 177 aaKnown RBP4.08□□□□□ -1.76
CKS1B-201ENST00000308987 OR2C1O95371 312 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 SCGB1D2O95969 90 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 NAPSAO96009 420 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 PPYP01298 95 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 TK1P04183 234 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 SOD3P08294 240 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 SRP19P09132 144 aaKnown RBP4.08□□□□□ -1.76
CKS1B-201ENST00000308987 FBP1P09467 338 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 COX5BP10606 129 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 VDAC1P21796 283 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms