RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 LINC00869P0C866 280 aa15.84■□□□□ 0.13
PCDH1-201ENST00000287008 SERF2P84101 59 aa15.84■□□□□ 0.13
PCDH1-201ENST00000287008 RIGQ13278 110 aa15.84■□□□□ 0.13
PCDH1-201ENST00000287008 LEAP2Q969E1 77 aa15.84■□□□□ 0.13
PCDH1-201ENST00000287008 TRPM7Q96QT4 1865 aa15.84■□□□□ 0.13
PCDH1-201ENST00000287008 MFNGO00587 321 aa15.84■□□□□ 0.13
PCDH1-201ENST00000287008 OR2A4O95047 310 aa15.84■□□□□ 0.13
PCDH1-201ENST00000287008 TMEM255AQ5JRV8 349 aa15.84■□□□□ 0.13
PCDH1-201ENST00000287008 UNQ9370/PRO34162Q6UXP9 181 aa15.84■□□□□ 0.13
PCDH1-201ENST00000287008 C19orf35Q6ZS72 473 aa15.84■□□□□ 0.13
PCDH1-201ENST00000287008 OR2A7Q96R45 310 aa15.84■□□□□ 0.13
PCDH1-201ENST00000287008 MUC6Q6W4X9 2439 aa15.83■□□□□ 0.13
PCDH1-201ENST00000287008 PGLYRP1O75594 196 aaPredicted RBP15.83■□□□□ 0.13
PCDH1-201ENST00000287008 SCO1O75880 301 aa15.83■□□□□ 0.13
PCDH1-201ENST00000287008 MFAP4P55083 255 aa15.83■□□□□ 0.13
PCDH1-201ENST00000287008 LAMTOR1Q6IAA8 161 aa15.83■□□□□ 0.13
PCDH1-201ENST00000287008 TMEM140Q9NV12 185 aa15.83■□□□□ 0.13
PCDH1-201ENST00000287008 KIF13BQ9NQT8 1826 aa15.83■□□□□ 0.13
PCDH1-201ENST00000287008 OR5AL1P0C617 328 aa15.83■□□□□ 0.12
PCDH1-201ENST00000287008 IZUMO4Q1ZYL8 232 aa15.83■□□□□ 0.12
PCDH1-201ENST00000287008 FAM24BQ8N5W8 94 aa15.83■□□□□ 0.12
PCDH1-201ENST00000287008 OR2T10Q8NGZ9 312 aa15.83■□□□□ 0.12
PCDH1-201ENST00000287008 SLC25A38Q96DW6 304 aa15.83■□□□□ 0.12
PCDH1-201ENST00000287008 RBM14Q96PK6 669 aaKnown RBP15.83■□□□□ 0.12
PCDH1-201ENST00000287008 IGHV2OR16-5A0A0B4J2B6 119 aa15.83■□□□□ 0.12
PCDH1-201ENST00000287008 BMPR1BO00238 502 aa15.83■□□□□ 0.12
PCDH1-201ENST00000287008 ZNF735P0CB33 412 aa15.83■□□□□ 0.12
PCDH1-201ENST00000287008 MMP9P14780 707 aa15.83■□□□□ 0.12
PCDH1-201ENST00000287008 ZP3P21754 424 aa15.83■□□□□ 0.12
PCDH1-201ENST00000287008 RND2P52198 227 aa15.83■□□□□ 0.12
PCDH1-201ENST00000287008 NHLH1Q02575 133 aa15.83■□□□□ 0.12
PCDH1-201ENST00000287008 NHLH2Q02577 135 aa15.83■□□□□ 0.12
PCDH1-201ENST00000287008 USF3Q68DE3 2245 aa15.83■□□□□ 0.12
PCDH1-201ENST00000287008 PDE6DO43924 150 aa15.83■□□□□ 0.12
PCDH1-201ENST00000287008 KLF7O75840 302 aaPredicted RBP15.83■□□□□ 0.12
PCDH1-201ENST00000287008 PPOXP50336 477 aa15.83■□□□□ 0.12
PCDH1-201ENST00000287008 FAM168AQ92567 244 aa15.83■□□□□ 0.12
PCDH1-201ENST00000287008 IGHV3OR16-10A0A075B7F0 116 aa15.82■□□□□ 0.12
PCDH1-201ENST00000287008 OVCH2Q7RTZ1 564 aa15.82■□□□□ 0.12
PCDH1-201ENST00000287008 OR11H7Q8NGC8 314 aa15.82■□□□□ 0.12
PCDH1-201ENST00000287008 PGA5P0DJD9 388 aa15.82■□□□□ 0.12
PCDH1-201ENST00000287008 LY6DQ14210 128 aa15.82■□□□□ 0.12
PCDH1-201ENST00000287008 CENPVQ7Z7K6 275 aaPredicted RBP15.82■□□□□ 0.12
PCDH1-201ENST00000287008 FAM208BQ5VWN6 2430 aa15.82■□□□□ 0.12
PCDH1-201ENST00000287008 PXMP4Q9Y6I8 212 aa15.82■□□□□ 0.12
PCDH1-201ENST00000287008 HEATR5BQ9P2D3 2071 aa15.82■□□□□ 0.12
PCDH1-201ENST00000287008 OTOFQ9HC10 1997 aa15.82■□□□□ 0.12
PCDH1-201ENST00000287008 C7orf66A4D0T2 115 aa15.82■□□□□ 0.12
PCDH1-201ENST00000287008 MFSD2BA6NFX1 497 aa15.82■□□□□ 0.12
PCDH1-201ENST00000287008 MARCH11A6NNE9 402 aa15.82■□□□□ 0.12
PCDH1-201ENST00000287008 KBTBD11O94819 623 aa15.82■□□□□ 0.12
PCDH1-201ENST00000287008 THY1P04216 161 aa15.82■□□□□ 0.12
PCDH1-201ENST00000287008 RD3LP0DJH9 198 aa15.82■□□□□ 0.12
PCDH1-201ENST00000287008 IGHV1-2P23083 117 aa15.82■□□□□ 0.12
PCDH1-201ENST00000287008 TM4SF20Q53R12 229 aa15.82■□□□□ 0.12
PCDH1-201ENST00000287008 TMEM78Q5T7P6 136 aa15.82■□□□□ 0.12
PCDH1-201ENST00000287008 AQP3Q92482 292 aa15.82■□□□□ 0.12
PCDH1-201ENST00000287008 C16orf92Q96LL3 132 aa15.82■□□□□ 0.12
PCDH1-201ENST00000287008 DCTN5Q9BTE1 182 aa15.82■□□□□ 0.12
PCDH1-201ENST00000287008 QTRT1Q9BXR0 403 aaKnown RBP15.82■□□□□ 0.12
PCDH1-201ENST00000287008 CSN3P07498 182 aa15.81■□□□□ 0.12
PCDH1-201ENST00000287008 Q1RN00 199 aa15.81■□□□□ 0.12
PCDH1-201ENST00000287008 TUSC1Q2TAM9 212 aa15.81■□□□□ 0.12
PCDH1-201ENST00000287008 SLC35E4Q6ICL7 350 aa15.81■□□□□ 0.12
PCDH1-201ENST00000287008 BPIFA4PQ86YQ2 179 aa15.81■□□□□ 0.12
PCDH1-201ENST00000287008 CLRN3Q8NCR9 226 aa15.81■□□□□ 0.12
PCDH1-201ENST00000287008 TMEM14DPA8MWL7 114 aa15.81■□□□□ 0.12
PCDH1-201ENST00000287008 WNT9BO14905 357 aa15.81■□□□□ 0.12
PCDH1-201ENST00000287008 MRPL30Q8TCC3 161 aaKnown RBP15.81■□□□□ 0.12
PCDH1-201ENST00000287008 SOSTQ9BQB4 213 aa15.81■□□□□ 0.12
PCDH1-201ENST00000287008 PTPRFP10586 1907 aa15.81■□□□□ 0.12
PCDH1-201ENST00000287008 CFHR1Q03591 330 aa15.8■□□□□ 0.12
PCDH1-201ENST00000287008 DPM3Q9P2X0 92 aa15.8■□□□□ 0.12
PCDH1-201ENST00000287008 SS18L1O75177 396 aaPredicted RBP15.8■□□□□ 0.12
PCDH1-201ENST00000287008 SSTR5P35346 364 aa15.8■□□□□ 0.12
PCDH1-201ENST00000287008 CLDN18P56856 261 aa15.8■□□□□ 0.12
PCDH1-201ENST00000287008 LDLRAD3Q86YD5 345 aa15.8■□□□□ 0.12
PCDH1-201ENST00000287008 FBLIM1Q8WUP2 373 aa15.8■□□□□ 0.12
PCDH1-201ENST00000287008 EAF1Q96JC9 268 aaPredicted RBP15.8■□□□□ 0.12
PCDH1-201ENST00000287008 PITX3O75364 302 aa15.8■□□□□ 0.12
PCDH1-201ENST00000287008 SRSF10O75494 262 aaKnown RBP15.8■□□□□ 0.12
PCDH1-201ENST00000287008 TBX6O95947 436 aaPredicted RBP15.8■□□□□ 0.12
PCDH1-201ENST00000287008 LHX2P50458 406 aa15.8■□□□□ 0.12
PCDH1-201ENST00000287008 ERVS71-1P61550 626 aa15.8■□□□□ 0.12
PCDH1-201ENST00000287008 PSG7Q13046 419 aa15.8■□□□□ 0.12
PCDH1-201ENST00000287008 MS4A10Q96PG2 267 aa15.8■□□□□ 0.12
PCDH1-201ENST00000287008 ZNF430Q9H8G1 570 aaPredicted RBP15.8■□□□□ 0.12
PCDH1-201ENST00000287008 TMSB15BA0A087X1C1 80 aa15.8■□□□□ 0.12
PCDH1-201ENST00000287008 FAM90A26D6RGX4 464 aa15.8■□□□□ 0.12
PCDH1-201ENST00000287008 HSD17B13Q7Z5P4 300 aaPredicted RBP15.8■□□□□ 0.12
PCDH1-201ENST00000287008 OR10J6PQ8NGY7 276 aa15.8■□□□□ 0.12
PCDH1-201ENST00000287008 FLVCR1-AS1Q8TAF5 88 aa15.8■□□□□ 0.12
PCDH1-201ENST00000287008 FAM216AQ8WUB2 273 aa15.8■□□□□ 0.12
PCDH1-201ENST00000287008 E9PLN8 166 aa15.79■□□□□ 0.12
PCDH1-201ENST00000287008 SNRPCP09234 159 aaKnown RBP15.79■□□□□ 0.12
PCDH1-201ENST00000287008 SPANXN1Q5VSR9 72 aa15.79■□□□□ 0.12
PCDH1-201ENST00000287008 VKORC1Q9BQB6 163 aa15.79■□□□□ 0.12
PCDH1-201ENST00000287008 TMEM56-RWDD3S4R434 201 aa15.79■□□□□ 0.12
PCDH1-201ENST00000287008 THADAQ6YHU6 1953 aa15.79■□□□□ 0.12
PCDH1-201ENST00000287008 TRAV30A0A087WSZ9 112 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms