RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 PRAMEF6Q5VXH4 476 aa20.92■□□□□ 0.94
ROM1-201ENST00000278833 SSX7Q7RTT5 188 aa20.92■□□□□ 0.94
ROM1-201ENST00000278833 AGMATQ9BSE5 352 aa20.92■□□□□ 0.94
ROM1-201ENST00000278833 ZNF71Q9NQZ8 489 aaPredicted RBP20.92■□□□□ 0.94
ROM1-201ENST00000278833 CHD3Q12873 2000 aaKnown RBP20.92■□□□□ 0.94
ROM1-201ENST00000278833 IGHV1-18A0A0C4DH31 117 aa20.92■□□□□ 0.94
ROM1-201ENST00000278833 MAP1LC3B2A6NCE7 125 aa20.92■□□□□ 0.94
ROM1-201ENST00000278833 MBP02144 154 aa20.92■□□□□ 0.94
ROM1-201ENST00000278833 FBP1P09467 338 aa20.92■□□□□ 0.94
ROM1-201ENST00000278833 FABP9Q0Z7S8 132 aa20.92■□□□□ 0.94
ROM1-201ENST00000278833 OR13D1Q8NGV5 346 aa20.92■□□□□ 0.94
ROM1-201ENST00000278833 MAP1LC3BQ9GZQ8 125 aa20.92■□□□□ 0.94
ROM1-201ENST00000278833 UBE2L5PA0A1B0GUS4 154 aa20.91■□□□□ 0.94
ROM1-201ENST00000278833 TNFSF13O75888 250 aa20.91■□□□□ 0.94
ROM1-201ENST00000278833 G6PCP35575 357 aa20.91■□□□□ 0.94
ROM1-201ENST00000278833 C3orf36Q3SXR2 165 aa20.91■□□□□ 0.94
ROM1-201ENST00000278833 MRGPRDQ8TDS7 321 aa20.91■□□□□ 0.94
ROM1-201ENST00000278833 TCTEX1D2Q8WW35 142 aa20.91■□□□□ 0.94
ROM1-201ENST00000278833 MBD3L4A6NDZ8 208 aaPredicted RBP20.9■□□□□ 0.94
ROM1-201ENST00000278833 MBD3L3A6NE82 208 aaPredicted RBP20.9■□□□□ 0.94
ROM1-201ENST00000278833 MBD3L5A6NJ08 208 aaPredicted RBP20.9■□□□□ 0.94
ROM1-201ENST00000278833 C17orf98A8MV24 154 aa20.9■□□□□ 0.94
ROM1-201ENST00000278833 CXorf67Q86X51 503 aaPredicted RBP20.9■□□□□ 0.94
ROM1-201ENST00000278833 OR13A1Q8NGR1 328 aa20.9■□□□□ 0.94
ROM1-201ENST00000278833 MBD3L2Q8NHZ7 208 aaPredicted RBP20.9■□□□□ 0.94
ROM1-201ENST00000278833 PROCRQ9UNN8 238 aa20.9■□□□□ 0.94
ROM1-201ENST00000278833 OR5H1A6NKK0 313 aa20.9■□□□□ 0.94
ROM1-201ENST00000278833 SPINT2O43291 252 aa20.9■□□□□ 0.94
ROM1-201ENST00000278833 TGOLN2O43493 480 aa20.9■□□□□ 0.94
ROM1-201ENST00000278833 ZNF737O75373 536 aa20.9■□□□□ 0.94
ROM1-201ENST00000278833 MDKP21741 143 aaPredicted RBP20.9■□□□□ 0.94
ROM1-201ENST00000278833 LCN15Q6UWW0 184 aa20.9■□□□□ 0.94
ROM1-201ENST00000278833 Q8WTZ3 238 aa20.9■□□□□ 0.94
ROM1-201ENST00000278833 EDARADDQ8WWZ3 215 aa20.9■□□□□ 0.94
ROM1-201ENST00000278833 SRRM5B3KS81 715 aa20.89■□□□□ 0.93
ROM1-201ENST00000278833 CYB5R3P00387 301 aaPredicted RBP20.89■□□□□ 0.93
ROM1-201ENST00000278833 KRASP01116 189 aa20.89■□□□□ 0.93
ROM1-201ENST00000278833 S100A9P06702 114 aaKnown RBP20.89■□□□□ 0.93
ROM1-201ENST00000278833 TMPRSS3P57727 454 aa20.89■□□□□ 0.93
ROM1-201ENST00000278833 ZNF816Q0VGE8 651 aaPredicted RBP20.89■□□□□ 0.93
ROM1-201ENST00000278833 RBMS3Q6XE24 437 aaKnown RBP20.89■□□□□ 0.93
ROM1-201ENST00000278833 BHLHA15Q7RTS1 189 aaPredicted RBP20.89■□□□□ 0.93
ROM1-201ENST00000278833 DTD1Q8TEA8 209 aa20.89■□□□□ 0.93
ROM1-201ENST00000278833 NCOR1P1Q9H4R4 102 aa20.89■□□□□ 0.93
ROM1-201ENST00000278833 SDF2L1Q9HCN8 221 aa20.89■□□□□ 0.93
ROM1-201ENST00000278833 JPT1Q9UK76 154 aa20.89■□□□□ 0.93
ROM1-201ENST00000278833 SLC25A15Q9Y619 301 aa20.89■□□□□ 0.93
ROM1-201ENST00000278833 IGHV3-64DA0A0J9YX35 117 aa20.88■□□□□ 0.93
ROM1-201ENST00000278833 CTXND1A0A1B0GTU2 59 aa20.88■□□□□ 0.93
ROM1-201ENST00000278833 PCP4L1A6NKN8 68 aa20.88■□□□□ 0.93
ROM1-201ENST00000278833 K7ENP7 123 aa20.88■□□□□ 0.93
ROM1-201ENST00000278833 SOX15O60248 233 aa20.88■□□□□ 0.93
ROM1-201ENST00000278833 UCNP55089 124 aa20.88■□□□□ 0.93
ROM1-201ENST00000278833 RAB11AP62491 216 aa20.88■□□□□ 0.93
ROM1-201ENST00000278833 GNB2P62879 340 aa20.88■□□□□ 0.93
ROM1-201ENST00000278833 FOXF2Q12947 444 aa20.88■□□□□ 0.93
ROM1-201ENST00000278833 ZNF808Q8N4W9 903 aaPredicted RBP20.88■□□□□ 0.93
ROM1-201ENST00000278833 CD177Q8N6Q3 437 aa20.88■□□□□ 0.93
ROM1-201ENST00000278833 STARD4Q96DR4 205 aa20.88■□□□□ 0.93
ROM1-201ENST00000278833 METRNQ9UJH8 293 aa20.88■□□□□ 0.93
ROM1-201ENST00000278833 ZFP92A6NM28 416 aa20.88■□□□□ 0.93
ROM1-201ENST00000278833 ZNF727A8MUV8 499 aa20.88■□□□□ 0.93
ROM1-201ENST00000278833 OR2B8PP59922 312 aa20.88■□□□□ 0.93
ROM1-201ENST00000278833 H2BFWTQ7Z2G1 175 aa20.88■□□□□ 0.93
ROM1-201ENST00000278833 LRRC29Q8WV35 223 aa20.88■□□□□ 0.93
ROM1-201ENST00000278833 ZNF251Q9BRH9 671 aa20.88■□□□□ 0.93
ROM1-201ENST00000278833 CTDSP1Q9GZU7 261 aa20.88■□□□□ 0.93
ROM1-201ENST00000278833 SSTR5P35346 364 aa20.87■□□□□ 0.93
ROM1-201ENST00000278833 CEBPGP53567 150 aa20.87■□□□□ 0.93
ROM1-201ENST00000278833 KIAA2026Q5HYC2 2103 aa20.87■□□□□ 0.93
ROM1-201ENST00000278833 BEND4Q6ZU67 534 aa20.87■□□□□ 0.93
ROM1-201ENST00000278833 RPP25LQ8N5L8 163 aaKnown RBP20.87■□□□□ 0.93
ROM1-201ENST00000278833 OR10P1Q8NGE3 313 aa20.87■□□□□ 0.93
ROM1-201ENST00000278833 RBFOX2O43251 390 aaKnown RBP eCLIP20.86■□□□□ 0.93
ROM1-201ENST00000278833 ERVFRD-1P60508 538 aa20.86■□□□□ 0.93
ROM1-201ENST00000278833 PDLIM3Q53GG5 364 aaPredicted RBP20.86■□□□□ 0.93
ROM1-201ENST00000278833 ZNF610Q8N9Z0 462 aa20.86■□□□□ 0.93
ROM1-201ENST00000278833 PPP1R35Q8TAP8 253 aa20.86■□□□□ 0.93
ROM1-201ENST00000278833 MSL2Q9HCI7 577 aa20.86■□□□□ 0.93
ROM1-201ENST00000278833 ATMQ13315 3056 aa20.86■□□□□ 0.93
ROM1-201ENST00000278833 TMEM250H0YL14 139 aa20.86■□□□□ 0.93
ROM1-201ENST00000278833 ITGB1BP1O14713 200 aa20.86■□□□□ 0.93
ROM1-201ENST00000278833 IGKV1D-33P01593 117 aa20.86■□□□□ 0.93
ROM1-201ENST00000278833 IGKV1-33P01594 117 aa20.86■□□□□ 0.93
ROM1-201ENST00000278833 GZMHP20718 246 aa20.86■□□□□ 0.93
ROM1-201ENST00000278833 PRDX2P32119 198 aa20.86■□□□□ 0.93
ROM1-201ENST00000278833 RPS10P46783 165 aaKnown RBP20.86■□□□□ 0.93
ROM1-201ENST00000278833 OR8G2PQ6IF36 304 aa20.86■□□□□ 0.93
ROM1-201ENST00000278833 ACSM6Q6P461 480 aa20.86■□□□□ 0.93
ROM1-201ENST00000278833 SNX22Q96L94 193 aa20.86■□□□□ 0.93
ROM1-201ENST00000278833 DIRC2Q96SL1 478 aa20.86■□□□□ 0.93
ROM1-201ENST00000278833 SLC39A9Q9NUM3 307 aa20.86■□□□□ 0.93
ROM1-201ENST00000278833 UFSP2Q9NUQ7 469 aa20.86■□□□□ 0.93
ROM1-201ENST00000278833 CLN8Q9UBY8 286 aa20.86■□□□□ 0.93
ROM1-201ENST00000278833 LINC00473A8K010 186 aa20.85■□□□□ 0.93
ROM1-201ENST00000278833 YPEL1O60688 119 aa20.85■□□□□ 0.93
ROM1-201ENST00000278833 CXCL1P09341 107 aa20.85■□□□□ 0.93
ROM1-201ENST00000278833 HOXA5P20719 270 aa20.85■□□□□ 0.93
ROM1-201ENST00000278833 FABP6P51161 128 aa20.85■□□□□ 0.93
ROM1-201ENST00000278833 B2MP61769 119 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms