RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 GMPPAQ96IJ6 420 aaPredicted RBP13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 PSMG3Q9BT73 122 aaPredicted RBP13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 CDC42EP3Q9UKI2 254 aa13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 MUC21A0A0G2JKD1 596 aa13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 ZNF816-ZNF321PA0A0X1KG74 233 aa13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 MUC21A0A140T8X8 626 aa13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 SPRY1O43609 319 aaPredicted RBP13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 PPIAL4GP0DN37 164 aa13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 RPS18P62269 152 aaKnown RBP13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 Q0VG73 95 aa13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 EIF3IQ13347 325 aaKnown RBP13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 LRRC75BQ2VPJ9 315 aa13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 MUC21Q5SSG8 566 aa13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 ZNF818PQ6ZRF7 136 aa13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 MAFAQ8NHW3 353 aaPredicted RBP13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 LYZL4Q96KX0 146 aa13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 OR4C12Q96R67 309 aa13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 CLEC7AQ9BXN2 247 aa13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 AKIRIN1Q9H9L7 192 aaPredicted RBP13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 WASHC3Q9Y3C0 194 aa13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 NDUFB4O95168 129 aa13.31□□□□□ -0.28
CTDSP1-201ENST00000273062 CA2P00918 260 aa13.31□□□□□ -0.28
CTDSP1-201ENST00000273062 FUT6P51993 359 aa13.31□□□□□ -0.28
CTDSP1-201ENST00000273062 PRRX1P54821 245 aa13.31□□□□□ -0.28
CTDSP1-201ENST00000273062 OR2M7Q8NG81 312 aa13.31□□□□□ -0.28
CTDSP1-201ENST00000273062 KCNK17Q96T54 332 aa13.31□□□□□ -0.28
CTDSP1-201ENST00000273062 COL5A1P20908 1838 aaPredicted RBP13.31□□□□□ -0.28
CTDSP1-201ENST00000273062 FREM2Q5SZK8 3169 aa13.31□□□□□ -0.28
CTDSP1-201ENST00000273062 SNURFLB1AK76 121 aa13.31□□□□□ -0.28
CTDSP1-201ENST00000273062 C11orf94C9JXX5 98 aa13.31□□□□□ -0.28
CTDSP1-201ENST00000273062 ATP5G3P48201 142 aa13.31□□□□□ -0.28
CTDSP1-201ENST00000273062 PRSS12P56730 875 aa13.31□□□□□ -0.28
CTDSP1-201ENST00000273062 MFAP5Q13361 173 aa13.31□□□□□ -0.28
CTDSP1-201ENST00000273062 CFAP161Q6P656 301 aa13.31□□□□□ -0.28
CTDSP1-201ENST00000273062 ASCL4Q6XD76 172 aa13.31□□□□□ -0.28
CTDSP1-201ENST00000273062 ZDHHC23Q8IYP9 409 aa13.31□□□□□ -0.28
CTDSP1-201ENST00000273062 WDR61Q9GZS3 305 aaKnown RBP13.31□□□□□ -0.28
CTDSP1-201ENST00000273062 CNTRLQ7Z7A1 2325 aa13.31□□□□□ -0.28
CTDSP1-201ENST00000273062 IGHV5-10-1A0A0J9YXX1 117 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 GATA2P23769 480 aaPredicted RBP13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 SERF2P84101 59 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 ZNF90Q03938 601 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 RBPJQ06330 500 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 HLA-DRB5Q30154 266 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 RHBDD2Q6NTF9 364 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 Q6ZRM9 215 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 GAPTQ8N292 157 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 GUCD1Q96NT3 240 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 SLC7A10Q9NS82 523 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 MS4A18H0YCH9 400 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 SPINK4O60575 86 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 SCRG1O75711 98 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 IGHG1P01857 330 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 IGHMP01871 453 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 NTF3P20783 257 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 VDAC1P21796 283 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 CLDN15P56746 228 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 HLA-BQ31612 363 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 MS4A18Q3C1V0 323 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 PIGYQ3MUY2 71 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 ANKRD37Q7Z713 158 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 OR4S2Q8NH73 311 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 SAP25Q8TEE9 199 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 TMEM186Q96B77 213 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 KCNS1Q96KK3 526 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 TMEM204Q9BSN7 226 aa13.3□□□□□ -0.28
CTDSP1-201ENST00000273062 PATE3B3GLJ2 98 aa13.29□□□□□ -0.28
CTDSP1-201ENST00000273062 SHISA8B8ZZ34 492 aa13.29□□□□□ -0.28
CTDSP1-201ENST00000273062 NPIPA5E9PKD4 350 aa13.29□□□□□ -0.28
CTDSP1-201ENST00000273062 OR7C2O60412 319 aa13.29□□□□□ -0.28
CTDSP1-201ENST00000273062 KITLGP21583 273 aa13.29□□□□□ -0.28
CTDSP1-201ENST00000273062 ACSF3Q4G176 576 aaPredicted RBP13.29□□□□□ -0.28
CTDSP1-201ENST00000273062 SAMD13Q5VXD3 122 aa13.29□□□□□ -0.28
CTDSP1-201ENST00000273062 FAM71F2Q6NXP2 309 aa13.29□□□□□ -0.28
CTDSP1-201ENST00000273062 PNKDQ8N490 385 aa13.29□□□□□ -0.28
CTDSP1-201ENST00000273062 NPIPA1Q9UND3 350 aa13.29□□□□□ -0.28
CTDSP1-201ENST00000273062 TMED7-TICAM2A0A0A6YYA0 188 aa13.29□□□□□ -0.28
CTDSP1-201ENST00000273062 IGKV1D-13A0A0B4J2D9 117 aa13.29□□□□□ -0.28
CTDSP1-201ENST00000273062 GJE1A6NN92 205 aa13.29□□□□□ -0.28
CTDSP1-201ENST00000273062 NUDT3O95989 172 aa13.29□□□□□ -0.28
CTDSP1-201ENST00000273062 MT-ATP6P00846 226 aa13.29□□□□□ -0.28
CTDSP1-201ENST00000273062 IGKV1-13P0DP09 117 aa13.29□□□□□ -0.28
CTDSP1-201ENST00000273062 GP1BBP13224 206 aa13.29□□□□□ -0.28
CTDSP1-201ENST00000273062 BATF2Q8N1L9 274 aa13.29□□□□□ -0.28
CTDSP1-201ENST00000273062 FER1L6-AS1Q8NA97 138 aa13.29□□□□□ -0.28
CTDSP1-201ENST00000273062 OR5B3Q8NH48 314 aa13.29□□□□□ -0.28
CTDSP1-201ENST00000273062 ABHD14BQ96IU4 210 aa13.29□□□□□ -0.28
CTDSP1-201ENST00000273062 ADAMTS9Q9P2N4 1935 aa13.29□□□□□ -0.28
CTDSP1-201ENST00000273062 G3V4G9 280 aa13.28□□□□□ -0.28
CTDSP1-201ENST00000273062 TRAF3IP2O43734 574 aaPredicted RBP13.28□□□□□ -0.28
CTDSP1-201ENST00000273062 ZNF324O75467 553 aaPredicted RBP13.28□□□□□ -0.28
CTDSP1-201ENST00000273062 PAX2Q02962 417 aa13.28□□□□□ -0.28
CTDSP1-201ENST00000273062 Q56UQ5 140 aa13.28□□□□□ -0.28
CTDSP1-201ENST00000273062 STUMQ69YW2 141 aa13.28□□□□□ -0.28
CTDSP1-201ENST00000273062 OR1B1Q8NGR6 318 aa13.28□□□□□ -0.28
CTDSP1-201ENST00000273062 TAF15Q92804 592 aaKnown RBP eCLIP13.28□□□□□ -0.28
CTDSP1-201ENST00000273062 A0A1W2PQD3 144 aa13.28□□□□□ -0.28
CTDSP1-201ENST00000273062 TOX4O94842 621 aa13.28□□□□□ -0.28
CTDSP1-201ENST00000273062 CFIP05156 583 aa13.28□□□□□ -0.28
CTDSP1-201ENST00000273062 OTX2P32243 289 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms