RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 TMEM30BQ3MIR4 351 aa13.71□□□□□ -0.21
CCDC40-201ENST00000269318 LRRC46Q96FV0 321 aa13.71□□□□□ -0.21
CCDC40-201ENST00000269318 SH3BGRL3Q9H299 93 aa13.71□□□□□ -0.21
CCDC40-201ENST00000269318 MMP26Q9NRE1 261 aa13.71□□□□□ -0.21
CCDC40-201ENST00000269318 HSPB7Q9UBY9 170 aa13.71□□□□□ -0.21
CCDC40-201ENST00000269318 LINC00312Q9Y6C7 94 aa13.71□□□□□ -0.21
CCDC40-201ENST00000269318 hADV38S2A0JD32 116 aa13.71□□□□□ -0.22
CCDC40-201ENST00000269318 NUDT19A8MXV4 375 aa13.71□□□□□ -0.22
CCDC40-201ENST00000269318 H3BP45 60 aa13.71□□□□□ -0.22
CCDC40-201ENST00000269318 M0R1X1 148 aa13.71□□□□□ -0.22
CCDC40-201ENST00000269318 RAB29O14966 203 aa13.71□□□□□ -0.22
CCDC40-201ENST00000269318 MMP23AO75900 390 aa13.71□□□□□ -0.22
CCDC40-201ENST00000269318 SULT1A1P50225 295 aa13.71□□□□□ -0.22
CCDC40-201ENST00000269318 TAS2R30P59541 319 aa13.71□□□□□ -0.22
CCDC40-201ENST00000269318 UQCC3Q6UW78 93 aa13.71□□□□□ -0.22
CCDC40-201ENST00000269318 HSD17B11Q8NBQ5 300 aa13.71□□□□□ -0.22
CCDC40-201ENST00000269318 TMEM204Q9BSN7 226 aa13.71□□□□□ -0.22
CCDC40-201ENST00000269318 PARP11Q9NR21 331 aa13.71□□□□□ -0.22
CCDC40-201ENST00000269318 DANCRP0C864 163 aa13.7□□□□□ -0.22
CCDC40-201ENST00000269318 IAPPP10997 89 aa13.7□□□□□ -0.22
CCDC40-201ENST00000269318 MEF2CQ06413 473 aaPredicted RBP13.7□□□□□ -0.22
CCDC40-201ENST00000269318 TNFRSF9Q07011 255 aa13.7□□□□□ -0.22
CCDC40-201ENST00000269318 ZNF672Q499Z4 452 aaPredicted RBP13.7□□□□□ -0.22
CCDC40-201ENST00000269318 TMEM217Q8N7C4 229 aa13.7□□□□□ -0.22
CCDC40-201ENST00000269318 C19orf12Q9NSK7 152 aa13.7□□□□□ -0.22
CCDC40-201ENST00000269318 RPUSD1Q9UJJ7 312 aaKnown RBP13.7□□□□□ -0.22
CCDC40-201ENST00000269318 ARFGEF3Q5TH69 2177 aa13.7□□□□□ -0.22
CCDC40-201ENST00000269318 CACNA1AO00555 2505 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 IGHV1-69-2A0A0G2JMI3 117 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 MARCH11A6NNE9 402 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 RBFOX2O43251 390 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCDC40-201ENST00000269318 UBE2KP61086 200 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 BLOC1S1P78537 153 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 ZNF273Q14593 569 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 BTNL8Q6UX41 500 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 LYPD2Q6UXB3 125 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 IL34Q6ZMJ4 242 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 STX12Q86Y82 276 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 MUC15Q8N387 334 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 STPG2Q8N412 459 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.69□□□□□ -0.22
CCDC40-201ENST00000269318 LYPD6BQ8NI32 183 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 DDB2Q92466 427 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 ZNF251Q9BRH9 671 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.69□□□□□ -0.22
CCDC40-201ENST00000269318 PSENENQ9NZ42 101 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 PKDREJQ9NTG1 2253 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 SAA2-SAA4A0A096LPE2 208 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 A0A1W2PPE3 182 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 FCGR3BO75015 233 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 SAA2P0DJI9 122 aaPredicted RBP13.69□□□□□ -0.22
CCDC40-201ENST00000269318 TMEM267Q0VDI3 215 aaPredicted RBP13.69□□□□□ -0.22
CCDC40-201ENST00000269318 PRAMEF5Q5TYX0 476 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 H2BFWTQ7Z2G1 175 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 BPIFCQ8NFQ6 507 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 ATP5SQ99766 215 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 HRH4Q9H3N8 390 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 RBKSQ9H477 322 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 KAAG1Q9UBP8 84 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 CTSZQ9UBR2 303 aa13.69□□□□□ -0.22
CCDC40-201ENST00000269318 HPRT1P00492 218 aa13.68□□□□□ -0.22
CCDC40-201ENST00000269318 NFYBP25208 207 aa13.68□□□□□ -0.22
CCDC40-201ENST00000269318 ATP6V0CP27449 155 aa13.68□□□□□ -0.22
CCDC40-201ENST00000269318 RPL31P62899 125 aaKnown RBP13.68□□□□□ -0.22
CCDC40-201ENST00000269318 PJVKQ0ZLH3 352 aa13.68□□□□□ -0.22
CCDC40-201ENST00000269318 Q6ZRG5 221 aa13.68□□□□□ -0.22
CCDC40-201ENST00000269318 OR10A7Q8NGE5 316 aa13.68□□□□□ -0.22
CCDC40-201ENST00000269318 R3HDM4Q96D70 268 aa13.68□□□□□ -0.22
CCDC40-201ENST00000269318 CACFD1Q9UGQ2 172 aa13.68□□□□□ -0.22
CCDC40-201ENST00000269318 TSNAXQ99598 290 aaKnown RBP13.67□□□□□ -0.22
CCDC40-201ENST00000269318 NARFLQ9H6Q4 476 aa13.67□□□□□ -0.22
CCDC40-201ENST00000269318 ANKHD1Q8IWZ3 2542 aaKnown RBP13.67□□□□□ -0.22
CCDC40-201ENST00000269318 SCO1O75880 301 aa13.67□□□□□ -0.22
CCDC40-201ENST00000269318 KIR2DS2P43631 304 aa13.67□□□□□ -0.22
CCDC40-201ENST00000269318 RAB5CP51148 216 aa13.67□□□□□ -0.22
CCDC40-201ENST00000269318 F2RL1P55085 397 aa13.67□□□□□ -0.22
CCDC40-201ENST00000269318 SRSF3P84103 164 aaKnown RBP13.67□□□□□ -0.22
CCDC40-201ENST00000269318 ARL16Q0P5N6 197 aa13.67□□□□□ -0.22
CCDC40-201ENST00000269318 AARDQ4LEZ3 155 aa13.67□□□□□ -0.22
CCDC40-201ENST00000269318 TMEM200BQ69YZ2 307 aa13.67□□□□□ -0.22
CCDC40-201ENST00000269318 SLC25A48Q6ZT89 311 aaKnown RBP13.67□□□□□ -0.22
CCDC40-201ENST00000269318 HAPLN4Q86UW8 402 aa13.67□□□□□ -0.22
CCDC40-201ENST00000269318 GAL3ST2Q9H3Q3 398 aa13.67□□□□□ -0.22
CCDC40-201ENST00000269318 NDUFB3O43676 98 aa13.66□□□□□ -0.22
CCDC40-201ENST00000269318 DFFBO76075 338 aa13.66□□□□□ -0.22
CCDC40-201ENST00000269318 METTL15P1P0C7V9 234 aa13.66□□□□□ -0.22
CCDC40-201ENST00000269318 MRPS11P82912 194 aaKnown RBP13.66□□□□□ -0.22
CCDC40-201ENST00000269318 LRRC10Q5BKY1 277 aa13.66□□□□□ -0.22
CCDC40-201ENST00000269318 TMEM14EPQ6UXP3 125 aa13.66□□□□□ -0.22
CCDC40-201ENST00000269318 S1PR3Q99500 378 aa13.66□□□□□ -0.22
CCDC40-201ENST00000269318 NUP50Q9UKX7 468 aa13.66□□□□□ -0.22
CCDC40-201ENST00000269318 PRELID3BQ9Y3B1 194 aa13.66□□□□□ -0.22
CCDC40-201ENST00000269318 RFNGQ9Y644 331 aa13.66□□□□□ -0.22
CCDC40-201ENST00000269318 FAM90A9PA6NNJ1 464 aa13.65□□□□□ -0.22
CCDC40-201ENST00000269318 DVL1O14640 695 aa13.65□□□□□ -0.22
CCDC40-201ENST00000269318 OR9G9P0C7N8 305 aa13.65□□□□□ -0.22
CCDC40-201ENST00000269318 CCL3L1P16619 93 aa13.65□□□□□ -0.22
CCDC40-201ENST00000269318 FHITP49789 147 aa13.65□□□□□ -0.22
CCDC40-201ENST00000269318 GNG10P50151 68 aa13.65□□□□□ -0.22
CCDC40-201ENST00000269318 ERVFRD-1P60508 538 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms