RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 S1PR2O95136 353 aa14.24□□□□□ -0.13
PHRF1-201ENST00000264555 CYB5R3P00387 301 aaPredicted RBP14.24□□□□□ -0.13
PHRF1-201ENST00000264555 GLRXP35754 106 aa14.24□□□□□ -0.13
PHRF1-201ENST00000264555 WBP1Q96G27 269 aa14.24□□□□□ -0.13
PHRF1-201ENST00000264555 NOL4LQ96MY1 436 aaPredicted RBP14.24□□□□□ -0.13
PHRF1-201ENST00000264555 RASL11BQ9BPW5 248 aa14.24□□□□□ -0.13
PHRF1-201ENST00000264555 SH3BGRL3Q9H299 93 aa14.24□□□□□ -0.13
PHRF1-201ENST00000264555 GNG7O60262 68 aa14.24□□□□□ -0.13
PHRF1-201ENST00000264555 ZNF735P0CB33 412 aa14.24□□□□□ -0.13
PHRF1-201ENST00000264555 TMEM204Q9BSN7 226 aa14.24□□□□□ -0.13
PHRF1-201ENST00000264555 GBF1Q92538 1859 aa14.23□□□□□ -0.13
PHRF1-201ENST00000264555 TRAV14DV4A0A0A6YYC5 116 aa14.23□□□□□ -0.13
PHRF1-201ENST00000264555 ACP7Q6ZNF0 438 aa14.23□□□□□ -0.13
PHRF1-201ENST00000264555 UBTD1Q9HAC8 227 aa14.23□□□□□ -0.13
PHRF1-201ENST00000264555 TMEM140Q9NV12 185 aa14.23□□□□□ -0.13
PHRF1-201ENST00000264555 FRMPD3Q5JV73 1810 aa14.23□□□□□ -0.13
PHRF1-201ENST00000264555 MSGN1A6NI15 193 aa14.23□□□□□ -0.13
PHRF1-201ENST00000264555 IGHV1-2P23083 117 aa14.23□□□□□ -0.13
PHRF1-201ENST00000264555 RANP62826 216 aaKnown RBP14.23□□□□□ -0.13
PHRF1-201ENST00000264555 ELOVL5Q9NYP7 299 aa14.23□□□□□ -0.13
PHRF1-201ENST00000264555 SDK2Q58EX2 2172 aa14.23□□□□□ -0.13
PHRF1-201ENST00000264555 SIGLEC5O15389 551 aa14.23□□□□□ -0.13
PHRF1-201ENST00000264555 UCP1P25874 307 aa14.23□□□□□ -0.13
PHRF1-201ENST00000264555 ERVFRD-1P60508 538 aa14.23□□□□□ -0.13
PHRF1-201ENST00000264555 WNT9BO14905 357 aa14.23□□□□□ -0.13
PHRF1-201ENST00000264555 PMCHP20382 165 aa14.23□□□□□ -0.13
PHRF1-201ENST00000264555 LGALS7P47929 136 aa14.23□□□□□ -0.13
PHRF1-201ENST00000264555 TXNDC17Q9BRA2 123 aa14.23□□□□□ -0.13
PHRF1-201ENST00000264555 TANC1Q9C0D5 1861 aa14.23□□□□□ -0.13
PHRF1-201ENST00000264555 RNF222A6NCQ9 220 aa14.22□□□□□ -0.13
PHRF1-201ENST00000264555 NAT1P18440 290 aa14.22□□□□□ -0.13
PHRF1-201ENST00000264555 CRYGSP22914 178 aa14.22□□□□□ -0.13
PHRF1-201ENST00000264555 MEF2BQ02080 365 aaPredicted RBP14.22□□□□□ -0.13
PHRF1-201ENST00000264555 CCDC144NLQ6NUI1 221 aa14.22□□□□□ -0.13
PHRF1-201ENST00000264555 CISD1Q9NZ45 108 aaKnown RBP14.22□□□□□ -0.13
PHRF1-201ENST00000264555 PINLYPA6NC86 204 aa14.22□□□□□ -0.13
PHRF1-201ENST00000264555 E9PQ18 207 aa14.22□□□□□ -0.13
PHRF1-201ENST00000264555 PSG7Q13046 419 aa14.22□□□□□ -0.13
PHRF1-201ENST00000264555 IZUMO4Q1ZYL8 232 aa14.22□□□□□ -0.13
PHRF1-201ENST00000264555 NCMAPQ5T1S8 102 aa14.22□□□□□ -0.13
PHRF1-201ENST00000264555 KLHDC1Q8N7A1 406 aa14.22□□□□□ -0.13
PHRF1-201ENST00000264555 ZNF729A6NN14 1252 aaPredicted RBP14.22□□□□□ -0.13
PHRF1-201ENST00000264555 SSTR5P35346 364 aa14.22□□□□□ -0.13
PHRF1-201ENST00000264555 HSPE1P61604 102 aaKnown RBP14.22□□□□□ -0.13
PHRF1-201ENST00000264555 PMS2P11Q13670 270 aa14.22□□□□□ -0.13
PHRF1-201ENST00000264555 MMDQ15546 238 aa14.22□□□□□ -0.13
PHRF1-201ENST00000264555 ZNF880Q6PDB4 577 aa14.22□□□□□ -0.13
PHRF1-201ENST00000264555 P2RX4Q99571 388 aa14.22□□□□□ -0.13
PHRF1-201ENST00000264555 M0QZ24 198 aa14.22□□□□□ -0.13
PHRF1-201ENST00000264555 ZG16O60844 167 aa14.22□□□□□ -0.13
PHRF1-201ENST00000264555 CEACAM1P13688 526 aa14.22□□□□□ -0.13
PHRF1-201ENST00000264555 RPL8P62917 257 aaKnown RBP14.22□□□□□ -0.13
PHRF1-201ENST00000264555 FHL1Q13642 323 aa14.22□□□□□ -0.13
PHRF1-201ENST00000264555 MS4A10Q96PG2 267 aa14.22□□□□□ -0.13
PHRF1-201ENST00000264555 WASHC3Q9Y3C0 194 aa14.22□□□□□ -0.13
PHRF1-201ENST00000264555 IGKV3D-15A0A087WSY6 115 aa14.21□□□□□ -0.13
PHRF1-201ENST00000264555 CD59P13987 128 aa14.21□□□□□ -0.13
PHRF1-201ENST00000264555 NABP1Q96AH0 204 aa14.21□□□□□ -0.13
PHRF1-201ENST00000264555 COA4Q9NYJ1 87 aa14.21□□□□□ -0.13
PHRF1-201ENST00000264555 C12orf77C9JDV5 145 aa14.21□□□□□ -0.13
PHRF1-201ENST00000264555 ANAPC1Q9H1A4 1944 aa14.21□□□□□ -0.13
PHRF1-201ENST00000264555 IQCF6A8MYZ5 107 aa14.21□□□□□ -0.13
PHRF1-201ENST00000264555 GGNQ86UU5 652 aa14.21□□□□□ -0.13
PHRF1-201ENST00000264555 RALGAPA1Q6GYQ0 2036 aa14.21□□□□□ -0.14
PHRF1-201ENST00000264555 F2RL2O00254 374 aa14.21□□□□□ -0.14
PHRF1-201ENST00000264555 BMI1P35226 326 aa14.21□□□□□ -0.14
PHRF1-201ENST00000264555 LY6G6FQ5SQ64 297 aa14.21□□□□□ -0.14
PHRF1-201ENST00000264555 DHRS7BQ6IAN0 325 aaPredicted RBP14.21□□□□□ -0.14
PHRF1-201ENST00000264555 MEGF10Q96KG7 1140 aa14.21□□□□□ -0.14
PHRF1-201ENST00000264555 Q8WTZ3 238 aa14.2□□□□□ -0.14
PHRF1-201ENST00000264555 A0A0A6YYD4 124 aa14.2□□□□□ -0.14
PHRF1-201ENST00000264555 MPTX1A8MV57 137 aa14.2□□□□□ -0.14
PHRF1-201ENST00000264555 SS18L1O75177 396 aaPredicted RBP14.2□□□□□ -0.14
PHRF1-201ENST00000264555 RPL27AP46776 148 aaKnown RBP14.2□□□□□ -0.14
PHRF1-201ENST00000264555 ID4P47928 161 aa14.2□□□□□ -0.14
PHRF1-201ENST00000264555 FA2HQ7L5A8 372 aa14.2□□□□□ -0.14
PHRF1-201ENST00000264555 OR10J1P30954 320 aa14.2□□□□□ -0.14
PHRF1-201ENST00000264555 CLDN16Q9Y5I7 305 aa14.2□□□□□ -0.14
PHRF1-201ENST00000264555 ARL2-SNX15V9GYD0 113 aa14.2□□□□□ -0.14
PHRF1-201ENST00000264555 ASXL3Q9C0F0 2248 aa14.2□□□□□ -0.14
PHRF1-201ENST00000264555 IGHV2OR16-5A0A0B4J2B6 119 aa14.2□□□□□ -0.14
PHRF1-201ENST00000264555 CEACAM18A8MTB9 384 aa14.2□□□□□ -0.14
PHRF1-201ENST00000264555 CRISP2P16562 243 aa14.2□□□□□ -0.14
PHRF1-201ENST00000264555 GPR6P46095 362 aaPredicted RBP14.2□□□□□ -0.14
PHRF1-201ENST00000264555 ACSF3Q4G176 576 aaPredicted RBP14.2□□□□□ -0.14
PHRF1-201ENST00000264555 TOMM20LQ6UXN7 152 aa14.2□□□□□ -0.14
PHRF1-201ENST00000264555 LDLRAD3Q86YD5 345 aa14.2□□□□□ -0.14
PHRF1-201ENST00000264555 LDLRAD4O15165 306 aa14.19□□□□□ -0.14
PHRF1-201ENST00000264555 VAMP8Q9BV40 100 aa14.19□□□□□ -0.14
PHRF1-201ENST00000264555 IGSF23A1L1A6 192 aa14.19□□□□□ -0.14
PHRF1-201ENST00000264555 GRAMD2BQ96HH9 432 aa14.19□□□□□ -0.14
PHRF1-201ENST00000264555 C16orf82Q7Z2V1 217 aa14.19□□□□□ -0.14
PHRF1-201ENST00000264555 PSMG3Q9BT73 122 aaPredicted RBP14.19□□□□□ -0.14
PHRF1-201ENST00000264555 SMIM6P0DI80 62 aa14.19□□□□□ -0.14
PHRF1-201ENST00000264555 FHITP49789 147 aa14.19□□□□□ -0.14
PHRF1-201ENST00000264555 RNASEKQ6P5S7 137 aaKnown RBP14.19□□□□□ -0.14
PHRF1-201ENST00000264555 SLC16A13Q7RTY0 426 aa14.19□□□□□ -0.14
PHRF1-201ENST00000264555 RARRES2Q99969 163 aa14.19□□□□□ -0.14
PHRF1-201ENST00000264555 RSPO3Q9BXY4 272 aaPredicted RBP14.19□□□□□ -0.14
PHRF1-201ENST00000264555 TPRP12270 2363 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms