RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 MEIG1Q5JSS6 88 aa13.63□□□□□ -0.23
SHANK3-201ENST00000262795 SP5Q6BEB4 398 aaPredicted RBP13.63□□□□□ -0.23
SHANK3-201ENST00000262795 SLC35E3Q7Z769 313 aa13.63□□□□□ -0.23
SHANK3-201ENST00000262795 C17orf47Q8NEP4 570 aa13.63□□□□□ -0.23
SHANK3-201ENST00000262795 DMRTA2Q96SC8 542 aa13.63□□□□□ -0.23
SHANK3-201ENST00000262795 IL20Q9NYY1 176 aa13.63□□□□□ -0.23
SHANK3-201ENST00000262795 CENPVL1A0A0U1RR11 272 aa13.63□□□□□ -0.23
SHANK3-201ENST00000262795 TMEM189A5PLL7 270 aa13.63□□□□□ -0.23
SHANK3-201ENST00000262795 SFT2D2O95562 160 aa13.63□□□□□ -0.23
SHANK3-201ENST00000262795 MDKP21741 143 aaPredicted RBP13.63□□□□□ -0.23
SHANK3-201ENST00000262795 PDCD11Q14690 1871 aaKnown RBP13.63□□□□□ -0.23
SHANK3-201ENST00000262795 OR2T10Q8NGZ9 312 aa13.63□□□□□ -0.23
SHANK3-201ENST00000262795 TMEM106BQ9NUM4 274 aa13.63□□□□□ -0.23
SHANK3-201ENST00000262795 CD160O95971 181 aa13.63□□□□□ -0.23
SHANK3-201ENST00000262795 AWAT1Q58HT5 328 aa13.63□□□□□ -0.23
SHANK3-201ENST00000262795 MAP1LC3CQ9BXW4 147 aa13.63□□□□□ -0.23
SHANK3-201ENST00000262795 TRAV1-2A0A0B4J238 106 aa13.63□□□□□ -0.23
SHANK3-201ENST00000262795 PGLYRP3Q96LB9 341 aa13.63□□□□□ -0.23
SHANK3-201ENST00000262795 C11orf68Q9H3H3 251 aaKnown RBP13.63□□□□□ -0.23
SHANK3-201ENST00000262795 FAM110DQ8TAY7 271 aaPredicted RBP13.63□□□□□ -0.23
SHANK3-201ENST00000262795 RND2P52198 227 aa13.63□□□□□ -0.23
SHANK3-201ENST00000262795 SMAGPQ0VAQ4 97 aa13.63□□□□□ -0.23
SHANK3-201ENST00000262795 LDLRAD4O15165 306 aa13.62□□□□□ -0.23
SHANK3-201ENST00000262795 INHBBP09529 407 aa13.62□□□□□ -0.23
SHANK3-201ENST00000262795 PRSS27Q9BQR3 290 aa13.62□□□□□ -0.23
SHANK3-201ENST00000262795 CFHR5Q9BXR6 569 aa13.62□□□□□ -0.23
SHANK3-201ENST00000262795 FGF20Q9NP95 211 aaPredicted RBP13.62□□□□□ -0.23
SHANK3-201ENST00000262795 OR2W1Q9Y3N9 320 aa13.62□□□□□ -0.23
SHANK3-201ENST00000262795 MTCL1Q9Y4B5 1905 aaKnown RBP13.62□□□□□ -0.23
SHANK3-201ENST00000262795 RPL36A-HNRNPH2H7BZ11 118 aa13.62□□□□□ -0.23
SHANK3-201ENST00000262795 CHAC2Q8WUX2 184 aa13.62□□□□□ -0.23
SHANK3-201ENST00000262795 MRPL24Q96A35 216 aaKnown RBP13.62□□□□□ -0.23
SHANK3-201ENST00000262795 TMEM167BQ9NRX6 74 aa13.62□□□□□ -0.23
SHANK3-201ENST00000262795 A6NDN8 102 aa13.62□□□□□ -0.23
SHANK3-201ENST00000262795 TMEM241Q24JQ0 296 aa13.62□□□□□ -0.23
SHANK3-201ENST00000262795 NFAM1Q8NET5 270 aaPredicted RBP13.62□□□□□ -0.23
SHANK3-201ENST00000262795 COL11A1P12107 1806 aaPredicted RBP13.62□□□□□ -0.23
SHANK3-201ENST00000262795 MGST3O14880 152 aa13.62□□□□□ -0.23
SHANK3-201ENST00000262795 RECKO95980 971 aa13.62□□□□□ -0.23
SHANK3-201ENST00000262795 OR1L6Q8NGR2 347 aa13.62□□□□□ -0.23
SHANK3-201ENST00000262795 NEU4Q8WWR8 484 aaPredicted RBP13.62□□□□□ -0.23
SHANK3-201ENST00000262795 RNASE6Q93091 150 aaKnown RBP13.62□□□□□ -0.23
SHANK3-201ENST00000262795 ADAT3Q96EY9 351 aaPredicted RBP13.62□□□□□ -0.23
SHANK3-201ENST00000262795 IL36RNQ9UBH0 155 aa13.62□□□□□ -0.23
SHANK3-201ENST00000262795 C1QTNF9BB2RNN3 333 aa13.62□□□□□ -0.23
SHANK3-201ENST00000262795 PPYP01298 95 aa13.62□□□□□ -0.23
SHANK3-201ENST00000262795 C1QTNF9P0C862 333 aa13.62□□□□□ -0.23
SHANK3-201ENST00000262795 GCSAMLQ5JQS6 135 aa13.62□□□□□ -0.23
SHANK3-201ENST00000262795 TBX15Q96SF7 602 aa13.62□□□□□ -0.23
SHANK3-201ENST00000262795 ADAP1O75689 374 aa13.62□□□□□ -0.23
SHANK3-201ENST00000262795 DLX6P56179 175 aa13.62□□□□□ -0.23
SHANK3-201ENST00000262795 TEPPQ6URK8 271 aa13.62□□□□□ -0.23
SHANK3-201ENST00000262795 CEACAM21Q3KPI0 293 aa13.61□□□□□ -0.23
SHANK3-201ENST00000262795 UBR3Q6ZT12 1888 aa13.61□□□□□ -0.23
SHANK3-201ENST00000262795 SRSF6Q13247 344 aaKnown RBP13.61□□□□□ -0.23
SHANK3-201ENST00000262795 LBHQ53QV2 105 aaPredicted RBP13.61□□□□□ -0.23
SHANK3-201ENST00000262795 OR2C3Q8N628 320 aa13.61□□□□□ -0.23
SHANK3-201ENST00000262795 HMGCLL1Q8TB92 370 aa13.61□□□□□ -0.23
SHANK3-201ENST00000262795 BPIFA4PQ86YQ2 179 aa13.61□□□□□ -0.23
SHANK3-201ENST00000262795 STPG3Q8N7X2 389 aa13.61□□□□□ -0.23
SHANK3-201ENST00000262795 HSPB8Q9UJY1 196 aa13.61□□□□□ -0.23
SHANK3-201ENST00000262795 V9GYH0 126 aa13.61□□□□□ -0.23
SHANK3-201ENST00000262795 C17orf51A8MQB3 221 aa13.61□□□□□ -0.23
SHANK3-201ENST00000262795 LINC00299Q6ZSB3 139 aa13.61□□□□□ -0.23
SHANK3-201ENST00000262795 TOMM7Q9P0U1 55 aa13.61□□□□□ -0.23
SHANK3-201ENST00000262795 ZNF107Q9UII5 783 aaPredicted RBP13.61□□□□□ -0.23
SHANK3-201ENST00000262795 CA2P00918 260 aa13.61□□□□□ -0.23
SHANK3-201ENST00000262795 MC5RP33032 325 aa13.61□□□□□ -0.23
SHANK3-201ENST00000262795 SMIM4Q8WVI0 70 aa13.61□□□□□ -0.23
SHANK3-201ENST00000262795 NPFFR1Q9GZQ6 430 aa13.61□□□□□ -0.23
SHANK3-201ENST00000262795 C11orf94C9JXX5 98 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 MALP21145 153 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 RNASE4P34096 147 aaKnown RBP13.6□□□□□ -0.23
SHANK3-201ENST00000262795 RPL8P62917 257 aaKnown RBP13.6□□□□□ -0.23
SHANK3-201ENST00000262795 TMEM255AQ5JRV8 349 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 ARRDC1Q8N5I2 433 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 OR4D11Q8NGI4 311 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 CRIM1Q9NZV1 1036 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 GAGE10A6NGK3 116 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 NDUFA2O43678 99 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 MFAP2P55001 183 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 FOXI3A8MTJ6 420 aaPredicted RBP13.6□□□□□ -0.23
SHANK3-201ENST00000262795 J3QKU1 62 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 MPV17LQ2QL34 196 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 DICER1Q9UPY3 1922 aaKnown RBP13.6□□□□□ -0.23
SHANK3-201ENST00000262795 CDRT15L2A8MXV6 281 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 TMEM177Q53S58 311 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 FAM166AQ6J272 317 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 HSPB1P04792 205 aaKnown RBP13.6□□□□□ -0.23
SHANK3-201ENST00000262795 SCTP09683 121 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 TDGF1P13385 188 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 DNLZQ5SXM8 178 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 SLC25A33Q9BSK2 321 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 SLC35B3Q9H1N7 401 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 THADAQ6YHU6 1953 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 GLIPR1P48060 266 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 LHX2P50458 406 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 LDLRAD2Q5SZI1 272 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 PEMTQ9UBM1 199 aa13.6□□□□□ -0.23
SHANK3-201ENST00000262795 GPR183P32249 361 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms