RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 OR4D10Q8NGI6 311 aa11.83□□□□□ -0.52
CDH1-201ENST00000261769 RCC2Q9P258 522 aaKnown RBP11.83□□□□□ -0.52
CDH1-201ENST00000261769 NPIPB11E5RHQ5 1161 aa11.83□□□□□ -0.52
CDH1-201ENST00000261769 ZNF737O75373 536 aa11.83□□□□□ -0.52
CDH1-201ENST00000261769 ALX3O95076 343 aa11.83□□□□□ -0.52
CDH1-201ENST00000261769 CFDP00746 253 aaPredicted RBP11.83□□□□□ -0.52
CDH1-201ENST00000261769 MMP9P14780 707 aa11.83□□□□□ -0.52
CDH1-201ENST00000261769 EBLN2Q6P2I7 272 aa11.83□□□□□ -0.52
CDH1-201ENST00000261769 ADAD2Q8NCV1 583 aaKnown RBP11.83□□□□□ -0.52
CDH1-201ENST00000261769 QTRT1Q9BXR0 403 aaKnown RBP11.83□□□□□ -0.52
CDH1-201ENST00000261769 LINC00312Q9Y6C7 94 aa11.83□□□□□ -0.52
CDH1-201ENST00000261769 BMPR1BO00238 502 aa11.82□□□□□ -0.52
CDH1-201ENST00000261769 EFNA4P52798 201 aa11.82□□□□□ -0.52
CDH1-201ENST00000261769 ATP5G2Q06055 141 aa11.82□□□□□ -0.52
CDH1-201ENST00000261769 GAMTQ14353 236 aa11.82□□□□□ -0.52
CDH1-201ENST00000261769 PSG5Q15238 335 aa11.82□□□□□ -0.52
CDH1-201ENST00000261769 OR4P4Q8NGL7 312 aa11.82□□□□□ -0.52
CDH1-201ENST00000261769 METRNQ9UJH8 293 aa11.82□□□□□ -0.52
CDH1-201ENST00000261769 PGLYRP1O75594 196 aaPredicted RBP11.82□□□□□ -0.52
CDH1-201ENST00000261769 KBTBD11O94819 623 aa11.82□□□□□ -0.52
CDH1-201ENST00000261769 TMEM140Q9NV12 185 aa11.82□□□□□ -0.52
CDH1-201ENST00000261769 ZNF705GA8MUZ8 300 aaPredicted RBP11.82□□□□□ -0.52
CDH1-201ENST00000261769 EWSR1Q01844 656 aaKnown RBP eCLIP11.82□□□□□ -0.52
CDH1-201ENST00000261769 MYPOPQ86VE0 399 aaPredicted RBP11.82□□□□□ -0.52
CDH1-201ENST00000261769 LSM10Q969L4 123 aaKnown RBP11.82□□□□□ -0.52
CDH1-201ENST00000261769 WBP1Q96G27 269 aa11.82□□□□□ -0.52
CDH1-201ENST00000261769 MANBALQ9NQG1 85 aa11.82□□□□□ -0.52
CDH1-201ENST00000261769 IGHV3-21A0A0B4J1V1 117 aa11.82□□□□□ -0.52
CDH1-201ENST00000261769 FAM90A26D6RGX4 464 aa11.82□□□□□ -0.52
CDH1-201ENST00000261769 G3V3Q6 166 aa11.82□□□□□ -0.52
CDH1-201ENST00000261769 MPDU1O75352 247 aa11.82□□□□□ -0.52
CDH1-201ENST00000261769 SSTR5P35346 364 aa11.82□□□□□ -0.52
CDH1-201ENST00000261769 HCP5Q6MZN7 132 aa11.82□□□□□ -0.52
CDH1-201ENST00000261769 LEAP2Q969E1 77 aa11.82□□□□□ -0.52
CDH1-201ENST00000261769 GPR132Q9UNW8 380 aa11.82□□□□□ -0.52
CDH1-201ENST00000261769 GATCO43716 136 aaKnown RBP11.81□□□□□ -0.52
CDH1-201ENST00000261769 ATP5IP56385 69 aaPredicted RBP11.81□□□□□ -0.52
CDH1-201ENST00000261769 FXYD3Q14802 87 aa11.81□□□□□ -0.52
CDH1-201ENST00000261769 IGFL3Q6UXB1 125 aa11.81□□□□□ -0.52
CDH1-201ENST00000261769 FGFRL1Q8N441 504 aa11.81□□□□□ -0.52
CDH1-201ENST00000261769 WFIKKN1Q96NZ8 548 aa11.81□□□□□ -0.52
CDH1-201ENST00000261769 PPP1R3EQ9H7J1 279 aa11.81□□□□□ -0.52
CDH1-201ENST00000261769 PCNX2A6NKB5 2137 aa11.81□□□□□ -0.52
CDH1-201ENST00000261769 MMP7P09237 267 aaPredicted RBP11.81□□□□□ -0.52
CDH1-201ENST00000261769 FABP9Q0Z7S8 132 aa11.81□□□□□ -0.52
CDH1-201ENST00000261769 ANKRD55Q3KP44 614 aa11.81□□□□□ -0.52
CDH1-201ENST00000261769 FAM201AQ5SY85 155 aa11.81□□□□□ -0.52
CDH1-201ENST00000261769 ZIC4Q8N9L1 334 aa11.81□□□□□ -0.52
CDH1-201ENST00000261769 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.81□□□□□ -0.52
CDH1-201ENST00000261769 RBM14Q96PK6 669 aaKnown RBP11.81□□□□□ -0.52
CDH1-201ENST00000261769 LY6G6EA0A0G2JKS1 128 aa11.81□□□□□ -0.52
CDH1-201ENST00000261769 KBTBD11-OT1A0A1B0GTJ5 212 aa11.81□□□□□ -0.52
CDH1-201ENST00000261769 RHBDL1O75783 438 aa11.81□□□□□ -0.52
CDH1-201ENST00000261769 HIST1H1BP16401 226 aaKnown RBP11.81□□□□□ -0.52
CDH1-201ENST00000261769 CD1BP29016 333 aa11.81□□□□□ -0.52
CDH1-201ENST00000261769 RPL30P62888 115 aaKnown RBP11.81□□□□□ -0.52
CDH1-201ENST00000261769 TCF15Q12870 199 aa11.81□□□□□ -0.52
CDH1-201ENST00000261769 U3KQA8 63 aa11.81□□□□□ -0.52
CDH1-201ENST00000261769 PLXNA3P51805 1871 aa11.81□□□□□ -0.52
CDH1-201ENST00000261769 A0A0G2JNJ9 132 aa11.81□□□□□ -0.52
CDH1-201ENST00000261769 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.81□□□□□ -0.52
CDH1-201ENST00000261769 NECAP1Q8NC96 275 aa11.81□□□□□ -0.52
CDH1-201ENST00000261769 Q9UFV3 132 aa11.81□□□□□ -0.52
CDH1-201ENST00000261769 C1QTNF9BB2RNN3 333 aa11.8□□□□□ -0.52
CDH1-201ENST00000261769 C1QTNF9P0C862 333 aa11.8□□□□□ -0.52
CDH1-201ENST00000261769 KHDC3LQ587J8 217 aa11.8□□□□□ -0.52
CDH1-201ENST00000261769 OR4X2Q8NGF9 303 aa11.8□□□□□ -0.52
CDH1-201ENST00000261769 NPFFR1Q9GZQ6 430 aa11.8□□□□□ -0.52
CDH1-201ENST00000261769 KLK2P20151 261 aa11.8□□□□□ -0.52
CDH1-201ENST00000261769 UCP3P55916 312 aa11.8□□□□□ -0.52
CDH1-201ENST00000261769 TMEM241Q24JQ0 296 aa11.8□□□□□ -0.52
CDH1-201ENST00000261769 OSR1Q8TAX0 266 aaPredicted RBP11.8□□□□□ -0.52
CDH1-201ENST00000261769 SLC25A38Q96DW6 304 aa11.8□□□□□ -0.52
CDH1-201ENST00000261769 MARCH11A6NNE9 402 aa11.8□□□□□ -0.52
CDH1-201ENST00000261769 IL22RA2Q969J5 263 aa11.8□□□□□ -0.52
CDH1-201ENST00000261769 EEF1AKMT3Q96AZ1 226 aa11.8□□□□□ -0.52
CDH1-201ENST00000261769 RNASEK-C17orf49H0YIS7 233 aa11.8□□□□□ -0.52
CDH1-201ENST00000261769 J3QKU1 62 aa11.8□□□□□ -0.52
CDH1-201ENST00000261769 EFNA2O43921 213 aa11.8□□□□□ -0.52
CDH1-201ENST00000261769 ADRB1P08588 477 aa11.8□□□□□ -0.52
CDH1-201ENST00000261769 DTX1Q86Y01 620 aa11.8□□□□□ -0.52
CDH1-201ENST00000261769 TOLLIPQ9H0E2 274 aa11.8□□□□□ -0.52
CDH1-201ENST00000261769 CLCF1Q9UBD9 225 aa11.8□□□□□ -0.52
CDH1-201ENST00000261769 A0A0G2JLM5 398 aa11.79□□□□□ -0.52
CDH1-201ENST00000261769 A0A1W2PPQ1 181 aa11.79□□□□□ -0.52
CDH1-201ENST00000261769 C12orf77C9JDV5 145 aa11.79□□□□□ -0.52
CDH1-201ENST00000261769 PGA5P0DJD9 388 aa11.79□□□□□ -0.52
CDH1-201ENST00000261769 RAB9AP51151 201 aa11.79□□□□□ -0.52
CDH1-201ENST00000261769 OPN4Q9UHM6 478 aa11.79□□□□□ -0.52
CDH1-201ENST00000261769 PLA2G10O15496 165 aa11.79□□□□□ -0.52
CDH1-201ENST00000261769 RPEL1Q2QD12 228 aa11.79□□□□□ -0.52
CDH1-201ENST00000261769 UQCC3Q6UW78 93 aa11.79□□□□□ -0.52
CDH1-201ENST00000261769 ZNF429Q86V71 674 aa11.79□□□□□ -0.52
CDH1-201ENST00000261769 CACNA1DQ01668 2161 aa11.79□□□□□ -0.52
CDH1-201ENST00000261769 MFNGO00587 321 aa11.79□□□□□ -0.52
CDH1-201ENST00000261769 SCGB1D1O95968 90 aa11.79□□□□□ -0.52
CDH1-201ENST00000261769 RD3LP0DJH9 198 aa11.79□□□□□ -0.52
CDH1-201ENST00000261769 RPL35P42766 123 aaKnown RBP11.79□□□□□ -0.52
CDH1-201ENST00000261769 MMP26Q9NRE1 261 aa11.79□□□□□ -0.52
CDH1-201ENST00000261769 H0YL77 283 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms