RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Tarm1B6A8R8 288 aa13.7□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 A630023A22RikJ3QP60 199 aa13.7□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Sub1P11031 127 aaKnown RBP13.7□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Mcrip1Q3UGS4 97 aa13.7□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Fbxw20Q5U467 468 aa13.7□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Olfr1211Q7TR09 311 aa13.7□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Ube3dQ8BX13 368 aa13.7□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Olfr1450Q8VF19 325 aa13.7□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Tmem123Q91Z22 195 aa13.7□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Wdr77Q99J09 342 aa13.7□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Plekha2Q9ERS5 425 aa13.7□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Tusc2Q9WVF8 110 aa13.7□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 OtofQ9ESF1 1997 aa13.7□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 FblP35550 327 aaKnown RBP13.7□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Atp4bP50992 294 aa13.7□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 DdiasQ6NZG4 898 aa13.7□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Olfr921Q7TRC0 313 aa13.7□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Q9DAN9 164 aa13.7□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Npas3Q9QZQ0 925 aa13.7□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Olfr709-ps1A0A140T8J9 307 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Gm9972E9Q053 102 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Ube2g1P62254 170 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Olfr1000Q7TR99 314 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Xkr8Q8C0T0 401 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Sulf2Q8CFG0 875 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 LiphQ8CIV3 451 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Olfr1294Q8VGE5 312 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Il4P07750 140 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Cnr1P47746 473 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Masp1P98064 704 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 BtlaQ7TSA3 306 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Tacstd2Q8BGV3 317 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Gjc3Q921C1 269 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Rab27bQ99P58 218 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 NpffQ9WVA8 114 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Gm13762A2ATG2 311 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Ntsr1O88319 424 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 H2-M10.6Q85ZW5 330 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Vkorc1Q9CRC0 161 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Slc2a8Q9JIF3 477 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Scn8aQ9WTU3 1978 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Gbf1Q6DFZ1 1861 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Igsf6P0C6B7 237 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Cib3Q0P523 160 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Cd55bQ61476 407 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Tbpl2Q6SJ95 350 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 PirtQ8BFY0 135 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Olfr1238Q8VG59 315 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Adipor1Q91VH1 375 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Sval1Q9D2X6 151 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Tspan32Q9JHH2 256 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Mapk7Q9WVS8 806 aa13.69□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Dock11A2AF47 2073 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Plxna3P70208 1872 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Vmn2r83E9Q0G7 864 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 GlulP15105 373 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Ca6P18761 317 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Mbd3l2Q3UXB0 228 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Cacfd1Q8BG21 171 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Coro2aQ8C0P5 524 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Rnaseh2cQ9CQ18 166 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 1700025F22RikQ9D9Y7 111 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 TpbgQ9Z0L0 426 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Zfp109A0A0U1RPC5 652 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Gm21976J3QNN2 249 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Mef2bO55087 349 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 P01798 113 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Cd79bP15530 228 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 GastP48757 101 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Isoc2aP85094 206 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 TecrlQ8BFZ1 361 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 RhofQ8BYP3 211 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Klk14Q8CGR5 250 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Olfr1170Q8VFG1 316 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Osr2Q91ZD1 312 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 D730048I06RikQ9CQB8 106 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Susd3Q9D176 269 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 NgbQ9ER97 151 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Rsg1A2A825 258 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Ankrd65F6YK91 380 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Dpagt1P42867 410 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Lcn12Q6JVL5 193 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Olfr1420Q8VF55 309 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Fam219aQ9D772 157 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Trav12-2A0N8N6 114 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Dnase1P49183 284 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 SelenopP70274 380 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Slc35e1Q8CD26 409 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Olfr720Q8VF37 316 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Olfr992Q8VGC6 309 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Insl6Q9QY05 191 aa13.68□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Olfr203L7N205 307 aa13.67□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Upk2P38575 184 aa13.67□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Q24JP4 165 aa13.67□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Fdx2Q9CPW2 174 aa13.67□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Dram2Q9CR48 267 aa13.67□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Olfr943Q9EQ92 314 aa13.67□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Fbxo15Q9QZN0 433 aa13.67□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Olfr1320A2AHM8 319 aa13.67□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 1700003H04RikE9PXM2 192 aa13.67□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 48.2 ms