RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 IGLV1-47P01700 117 aa10.52□□□□□ -0.73
PHGDH-220ENST00000641570 CTSDP07339 412 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-220ENST00000641570 RRASP10301 218 aa10.52□□□□□ -0.73
PHGDH-220ENST00000641570 CCR6P51684 374 aa10.52□□□□□ -0.73
PHGDH-220ENST00000641570 RPL39P5Q59GN2 51 aa10.52□□□□□ -0.73
PHGDH-220ENST00000641570 FAM53AQ6NSI3 398 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-220ENST00000641570 Q71RC1 249 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-220ENST00000641570 RNASE11Q8TAA1 199 aaKnown RBP10.52□□□□□ -0.73
PHGDH-220ENST00000641570 PARP12Q9H0J9 701 aaKnown RBP10.52□□□□□ -0.73
PHGDH-220ENST00000641570 OCEL1Q9H607 264 aa10.52□□□□□ -0.73
PHGDH-220ENST00000641570 CCL28Q9NRJ3 127 aa10.52□□□□□ -0.73
PHGDH-220ENST00000641570 SDHAF2Q9NX18 166 aa10.52□□□□□ -0.73
PHGDH-220ENST00000641570 NUBP2Q9Y5Y2 271 aa10.52□□□□□ -0.73
PHGDH-220ENST00000641570 IGKV1D-13A0A0B4J2D9 117 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 A0A0U1RQK1 487 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 ATG12O94817 140 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 NDUFB6O95139 128 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 AVPP01185 164 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 SERPINE2P07093 398 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 FAM106CPP0CH98 169 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 IGKV1-13P0DP09 117 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 AKR1C4P17516 323 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 MC5RP33032 325 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 ZNF134P52741 427 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 PIGPP57054 158 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 ZNF816Q0VGE8 651 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-220ENST00000641570 LRRC75BQ2VPJ9 315 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 TRIM16LQ309B1 348 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 C4orf46Q504U0 113 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 HCP5Q6MZN7 132 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 ZNF818PQ6ZRF7 136 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 ZNF833PQ6ZTB9 187 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 LHFPL4Q7Z7J7 247 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 LHFPL1Q86WI0 220 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 DRAM1Q8N682 238 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 BVESQ8NE79 360 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 OR51H1Q8NH63 302 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 CD300LFQ8TDQ1 290 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 ZNF418Q8TF45 676 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-220ENST00000641570 RTN4IP1Q8WWV3 396 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-220ENST00000641570 C22orf15Q8WYQ4 148 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 RSRP1Q9BUV0 290 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 MRPL20Q9BYC9 149 aaKnown RBP10.51□□□□□ -0.73
PHGDH-220ENST00000641570 C20orf85Q9H1P6 137 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 SLC2A9Q9NRM0 540 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 ZNRD1Q9P1U0 126 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 PITPNC1Q9UKF7 332 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 TBC1D24Q9ULP9 559 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 GAB2Q9UQC2 676 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 DOCK11Q5JSL3 2073 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 AKAP9Q99996 3911 aa10.51□□□□□ -0.73
PHGDH-220ENST00000641570 MYO9AB2RTY4 2548 aa10.5□□□□□ -0.73
PHGDH-220ENST00000641570 IGHV1-3A0A0C4DH29 117 aa10.5□□□□□ -0.73
PHGDH-220ENST00000641570 ARPC1BO15143 372 aaKnown RBP10.5□□□□□ -0.73
PHGDH-220ENST00000641570 B3GALNT1O75752 331 aa10.5□□□□□ -0.73
PHGDH-220ENST00000641570 ZNF735P0CB33 412 aa10.5□□□□□ -0.73
PHGDH-220ENST00000641570 VAMP1P23763 118 aa10.5□□□□□ -0.73
PHGDH-220ENST00000641570 ERVK-16P61578 105 aa10.5□□□□□ -0.73
PHGDH-220ENST00000641570 KRTAP1-1Q07627 177 aa10.5□□□□□ -0.73
PHGDH-220ENST00000641570 KLF17Q5JT82 389 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-220ENST00000641570 ZNF660Q6AZW8 331 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-220ENST00000641570 OR4S2Q8NH73 311 aa10.5□□□□□ -0.73
PHGDH-220ENST00000641570 JMJD8Q96S16 334 aa10.5□□□□□ -0.73
PHGDH-220ENST00000641570 AIFM2Q9BRQ8 373 aa10.5□□□□□ -0.73
PHGDH-220ENST00000641570 GSX1Q9H4S2 264 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-220ENST00000641570 SLC35D1Q9NTN3 355 aa10.5□□□□□ -0.73
PHGDH-220ENST00000641570 NUDT15Q9NV35 164 aa10.5□□□□□ -0.73
PHGDH-220ENST00000641570 YLPM1P49750 1951 aaKnown RBP10.5□□□□□ -0.73
PHGDH-220ENST00000641570 CR1P17927 2039 aa10.5□□□□□ -0.73
PHGDH-220ENST00000641570 TRAV6A0A075B6T7 132 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 CYSRT1A8MQ03 144 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 INAFM1C9JVW0 142 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 TIMM23O14925 209 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 PLA2G10O15496 165 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 FCGR3BO75015 233 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 DHFRP00374 187 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 TCRBP04435 133 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 H2AFB2P0C5Z0 115 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 PI3P19957 117 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 SLC6A1P30531 599 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 GNRHRP30968 328 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 ZNF137PP52743 207 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 RAB25P57735 213 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 UBE2MP61081 183 aaKnown RBP10.49□□□□□ -0.73
PHGDH-220ENST00000641570 SRPXP78539 464 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 PLGLAQ15195 96 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 OR2B11Q5JQS5 317 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 C9orf139Q6ZV77 190 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 TBC1D26Q86UD7 250 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 TCTEX1D1Q8N7M0 179 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 DRAXINQ8NBI3 349 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-220ENST00000641570 MINDY2Q8NBR6 621 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 OR5R1Q8NH85 324 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 AGMATQ9BSE5 352 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 GPN1Q9HCN4 374 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-220ENST00000641570 KIAA1456Q9P272 454 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 WASHC3Q9Y3C0 194 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 KIAA2026Q5HYC2 2103 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 ITPR3Q14573 2671 aa10.49□□□□□ -0.73
PHGDH-220ENST00000641570 TMEM11P17152 192 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms