RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 OR2Y1Q8NGV0 311 aa0.47□□□□□ -2.33
SRP54-214ENST00000630962 CLDND2Q8NHS1 167 aa0.47□□□□□ -2.33
SRP54-214ENST00000630962 SMCR5Q8TEV8 140 aa0.47□□□□□ -2.33
SRP54-214ENST00000630962 CCDC127Q96BQ5 260 aa0.47□□□□□ -2.33
SRP54-214ENST00000630962 ODF3Q96PU9 254 aa0.47□□□□□ -2.33
SRP54-214ENST00000630962 GLS2Q9UI32 602 aa0.47□□□□□ -2.33
SRP54-214ENST00000630962 LIN7AO14910 233 aaPredicted RBP0.46□□□□□ -2.34
SRP54-214ENST00000630962 AQP5P55064 265 aa0.46□□□□□ -2.34
SRP54-214ENST00000630962 ATP5J2P56134 94 aa0.46□□□□□ -2.34
SRP54-214ENST00000630962 ACTBP60709 375 aa0.46□□□□□ -2.34
SRP54-214ENST00000630962 ACTG1P63261 375 aa0.46□□□□□ -2.34
SRP54-214ENST00000630962 LYZL1Q6UWQ5 148 aa0.46□□□□□ -2.34
SRP54-214ENST00000630962 FP248Q71RG6 208 aaPredicted RBP0.46□□□□□ -2.34
SRP54-214ENST00000630962 DCXRQ7Z4W1 244 aa0.46□□□□□ -2.34
SRP54-214ENST00000630962 ST13P4Q8IZP2 240 aaPredicted RBP0.46□□□□□ -2.34
SRP54-214ENST00000630962 TMEM239Q8WW34 195 aa0.46□□□□□ -2.34
SRP54-214ENST00000630962 HBEGFQ99075 208 aa0.46□□□□□ -2.34
SRP54-214ENST00000630962 TMEM222Q9H0R3 208 aa0.46□□□□□ -2.34
SRP54-214ENST00000630962 IFT46Q9NQC8 304 aa0.46□□□□□ -2.34
SRP54-214ENST00000630962 RAB19A4D1S5 217 aa0.45□□□□□ -2.34
SRP54-214ENST00000630962 GPR171O14626 319 aa0.45□□□□□ -2.34
SRP54-214ENST00000630962 ZNF737O75373 536 aa0.45□□□□□ -2.34
SRP54-214ENST00000630962 BPGMP07738 259 aa0.45□□□□□ -2.34
SRP54-214ENST00000630962 PSMB8P28062 276 aa0.45□□□□□ -2.34
SRP54-214ENST00000630962 CRATP43155 626 aa0.45□□□□□ -2.34
SRP54-214ENST00000630962 TMEM249Q2WGJ8 235 aa0.45□□□□□ -2.34
SRP54-214ENST00000630962 TMEM155Q4W5P6 130 aa0.45□□□□□ -2.34
SRP54-214ENST00000630962 KIAA2026Q5HYC2 2103 aa0.45□□□□□ -2.34
SRP54-214ENST00000630962 SCGB1D4Q6XE38 83 aa0.45□□□□□ -2.34
SRP54-214ENST00000630962 KTN1-AS1Q86SY8 53 aa0.45□□□□□ -2.34
SRP54-214ENST00000630962 ZNF321PQ8N8H1 164 aa0.45□□□□□ -2.34
SRP54-214ENST00000630962 TMEM75Q8N9X5 138 aa0.45□□□□□ -2.34
SRP54-214ENST00000630962 MRPL57Q9BQC6 102 aaKnown RBP0.45□□□□□ -2.34
SRP54-214ENST00000630962 ADAT1Q9BUB4 502 aaKnown RBP0.45□□□□□ -2.34
SRP54-214ENST00000630962 VCX3BQ9H321 246 aa0.45□□□□□ -2.34
SRP54-214ENST00000630962 TRAPPC13A5PLN9 417 aa0.44□□□□□ -2.34
SRP54-214ENST00000630962 TXNDC9O14530 226 aa0.44□□□□□ -2.34
SRP54-214ENST00000630962 KLRC4O43908 158 aa0.44□□□□□ -2.34
SRP54-214ENST00000630962 PGLYRP1O75594 196 aaPredicted RBP0.44□□□□□ -2.34
SRP54-214ENST00000630962 NPPAP01160 153 aa0.44□□□□□ -2.34
SRP54-214ENST00000630962 CRYBB3P26998 211 aa0.44□□□□□ -2.34
SRP54-214ENST00000630962 SERPINB10P48595 397 aa0.44□□□□□ -2.34
SRP54-214ENST00000630962 RBM11P57052 281 aaKnown RBP0.44□□□□□ -2.34
SRP54-214ENST00000630962 CTAG1AP78358 180 aa0.44□□□□□ -2.34
SRP54-214ENST00000630962 CDK5R1Q15078 307 aa0.44□□□□□ -2.34
SRP54-214ENST00000630962 ELOBQ15370 118 aa0.44□□□□□ -2.34
SRP54-214ENST00000630962 PLCZ1Q86YW0 608 aa0.44□□□□□ -2.34
SRP54-214ENST00000630962 OR5P2Q8WZ92 322 aa0.44□□□□□ -2.34
SRP54-214ENST00000630962 HINT2Q9BX68 163 aa0.44□□□□□ -2.34
SRP54-214ENST00000630962 TAAR3PQ9P1P4 343 aa0.44□□□□□ -2.34
SRP54-214ENST00000630962 CLEC2DQ9UHP7 191 aa0.44□□□□□ -2.34
SRP54-214ENST00000630962 SNX24Q9Y343 169 aa0.44□□□□□ -2.34
SRP54-214ENST00000630962 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.44□□□□□ -2.34
SRP54-214ENST00000630962 INTS1Q8N201 2190 aaKnown RBP0.44□□□□□ -2.34
SRP54-214ENST00000630962 KIAA0232Q92628 1395 aa0.44□□□□□ -2.34
SRP54-214ENST00000630962 DIDO1Q9BTC0 2240 aaKnown RBP0.44□□□□□ -2.34
SRP54-214ENST00000630962 A0A1B0GX12 115 aa0.43□□□□□ -2.34
SRP54-214ENST00000630962 HMSDA8MTL9 139 aa0.43□□□□□ -2.34
SRP54-214ENST00000630962 GSTZ1O43708 216 aaPredicted RBP0.43□□□□□ -2.34
SRP54-214ENST00000630962 CRYBA1P05813 215 aa0.43□□□□□ -2.34
SRP54-214ENST00000630962 OR13C7P0DN81 318 aa0.43□□□□□ -2.34
SRP54-214ENST00000630962 AGTR1P30556 359 aa0.43□□□□□ -2.34
SRP54-214ENST00000630962 CA7P43166 264 aa0.43□□□□□ -2.34
SRP54-214ENST00000630962 RPL27AP46776 148 aaKnown RBP0.43□□□□□ -2.34
SRP54-214ENST00000630962 C18orf21Q32NC0 220 aaPredicted RBP0.43□□□□□ -2.34
SRP54-214ENST00000630962 SLC36A2Q495M3 483 aa0.43□□□□□ -2.34
SRP54-214ENST00000630962 AHSA2Q719I0 299 aa0.43□□□□□ -2.34
SRP54-214ENST00000630962 CCDC12Q8WUD4 166 aaPredicted RBP0.43□□□□□ -2.34
SRP54-214ENST00000630962 TNFAIP8L1Q8WVP5 186 aa0.43□□□□□ -2.34
SRP54-214ENST00000630962 CPNE2Q96FN4 548 aaPredicted RBP0.43□□□□□ -2.34
SRP54-214ENST00000630962 ACY3Q96HD9 319 aa0.43□□□□□ -2.34
SRP54-214ENST00000630962 ZNF514Q96K75 400 aaPredicted RBP0.43□□□□□ -2.34
SRP54-214ENST00000630962 OR7D2Q96RA2 312 aa0.43□□□□□ -2.34
SRP54-214ENST00000630962 RAB1BQ9H0U4 201 aa0.43□□□□□ -2.34
SRP54-214ENST00000630962 MAT2BQ9NZL9 334 aa0.43□□□□□ -2.34
SRP54-214ENST00000630962 KLK5Q9Y337 293 aaPredicted RBP0.43□□□□□ -2.34
SRP54-214ENST00000630962 SNURFQ9Y675 71 aa0.43□□□□□ -2.34
SRP54-214ENST00000630962 MYH11P35749 1972 aa0.43□□□□□ -2.34
SRP54-214ENST00000630962 LAMB4A4D0S4 1761 aa0.42□□□□□ -2.34
SRP54-214ENST00000630962 COPEO14579 308 aa0.42□□□□□ -2.34
SRP54-214ENST00000630962 CIAO1O76071 339 aa0.42□□□□□ -2.34
SRP54-214ENST00000630962 LDOC1O95751 146 aaPredicted RBP0.42□□□□□ -2.34
SRP54-214ENST00000630962 IFNGR2P38484 337 aa0.42□□□□□ -2.34
SRP54-214ENST00000630962 DAD1P61803 113 aa0.42□□□□□ -2.34
SRP54-214ENST00000630962 HIST1H4AP62805 103 aaKnown RBP0.42□□□□□ -2.34
SRP54-214ENST00000630962 C1DQ13901 141 aaKnown RBP0.42□□□□□ -2.34
SRP54-214ENST00000630962 NUMA1Q14980 2115 aa0.42□□□□□ -2.34
SRP54-214ENST00000630962 LRRC75BQ2VPJ9 315 aa0.42□□□□□ -2.34
SRP54-214ENST00000630962 DRAM2Q6UX65 266 aa0.42□□□□□ -2.34
SRP54-214ENST00000630962 GID4Q8IVV7 300 aa0.42□□□□□ -2.34
SRP54-214ENST00000630962 CDRT4Q8N9R6 151 aa0.42□□□□□ -2.34
SRP54-214ENST00000630962 LRRC20Q8TCA0 184 aa0.42□□□□□ -2.34
SRP54-214ENST00000630962 BCL7BQ9BQE9 202 aa0.42□□□□□ -2.34
SRP54-214ENST00000630962 OR51B6Q9H340 312 aa0.42□□□□□ -2.34
SRP54-214ENST00000630962 SLC2A9Q9NRM0 540 aa0.42□□□□□ -2.34
SRP54-214ENST00000630962 NXT1Q9UKK6 140 aaKnown RBP0.42□□□□□ -2.34
SRP54-214ENST00000630962 TIMM9Q9Y5J7 89 aa0.42□□□□□ -2.34
SRP54-214ENST00000630962 BRWD1Q9NSI6 2320 aa0.42□□□□□ -2.34
SRP54-214ENST00000630962 PCDH15Q96QU1 1955 aa0.41□□□□□ -2.34
SRP54-214ENST00000630962 TECTAO75443 2155 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms