RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 TPTE2P1Q5T6R2 138 aa16.04■□□□□ 0.16
PDLIM2-221ENST00000622702 ZNF833PQ6ZTB9 187 aa16.04■□□□□ 0.16
PDLIM2-221ENST00000622702 SECTM1Q8WVN6 248 aa16.04■□□□□ 0.16
PDLIM2-221ENST00000622702 TOMM40LQ969M1 308 aa16.04■□□□□ 0.16
PDLIM2-221ENST00000622702 OOSP1A8MZH6 123 aa16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 PROP1O75360 226 aa16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 IGLV2-14P01704 120 aa16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 SURF2Q15527 256 aaPredicted RBP16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 LPCAT3Q6P1A2 487 aa16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 DRAM1Q8N682 238 aa16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 C17orf50Q8WW18 174 aa16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 RPEQ96AT9 228 aa16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 S1PR3Q99500 378 aa16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 MS4A7Q9GZW8 240 aaPredicted RBP16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 CCL28Q9NRJ3 127 aa16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 SDHAF2Q9NX18 166 aa16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 HSD17B6O14756 317 aa16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 GNRHRP30968 328 aa16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 DEFA1P59665 94 aa16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 DEFA3P59666 94 aa16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 ZNF816Q0VGE8 651 aaPredicted RBP16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 DCTN2Q13561 401 aaKnown RBP16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 DIAPH2-AS1Q14236 149 aa16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 RPL39P5Q59GN2 51 aa16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 SLC38A6Q8IZM9 456 aa16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 ZBTB34Q8NCN2 500 aa16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 C5orf30Q96GV9 206 aa16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 AKR1E2Q96JD6 320 aa16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 SLC25A21Q9BQT8 299 aaPredicted RBP16.03■□□□□ 0.16
PDLIM2-221ENST00000622702 A0A0U1RQK1 487 aa16.02■□□□□ 0.15
PDLIM2-221ENST00000622702 TXNL1O43396 289 aa16.02■□□□□ 0.15
PDLIM2-221ENST00000622702 GAPDHP04406 335 aaKnown RBP16.02■□□□□ 0.15
PDLIM2-221ENST00000622702 SSX2Q16385 188 aa16.02■□□□□ 0.15
PDLIM2-221ENST00000622702 MZT2BQ6NZ67 158 aa16.02■□□□□ 0.15
PDLIM2-221ENST00000622702 BCL6BQ8N143 479 aaPredicted RBP16.02■□□□□ 0.15
PDLIM2-221ENST00000622702 BVESQ8NE79 360 aa16.02■□□□□ 0.15
PDLIM2-221ENST00000622702 RTN4IP1Q8WWV3 396 aaPredicted RBP16.02■□□□□ 0.15
PDLIM2-221ENST00000622702 RSRP1Q9BUV0 290 aa16.02■□□□□ 0.15
PDLIM2-221ENST00000622702 SLC6A1P30531 599 aa16.01■□□□□ 0.15
PDLIM2-221ENST00000622702 CCR6P51684 374 aa16.01■□□□□ 0.15
PDLIM2-221ENST00000622702 RBMS2Q15434 407 aaKnown RBP16.01■□□□□ 0.15
PDLIM2-221ENST00000622702 TUSC1Q2TAM9 212 aa16.01■□□□□ 0.15
PDLIM2-221ENST00000622702 PLA1AQ53H76 456 aa16.01■□□□□ 0.15
PDLIM2-221ENST00000622702 CCDC144NLQ6NUI1 221 aa16.01■□□□□ 0.15
PDLIM2-221ENST00000622702 ZNF818PQ6ZRF7 136 aa16.01■□□□□ 0.15
PDLIM2-221ENST00000622702 TGIF2LXQ8IUE1 241 aa16.01■□□□□ 0.15
PDLIM2-221ENST00000622702 OR8H3Q8N146 312 aa16.01■□□□□ 0.15
PDLIM2-221ENST00000622702 DYNAPQ8N1N2 210 aa16.01■□□□□ 0.15
PDLIM2-221ENST00000622702 MARCH1Q8TCQ1 289 aa16.01■□□□□ 0.15
PDLIM2-221ENST00000622702 ZNF486Q96H40 463 aaPredicted RBP16.01■□□□□ 0.15
PDLIM2-221ENST00000622702 SCGB3A2Q96PL1 93 aa16.01■□□□□ 0.15
PDLIM2-221ENST00000622702 MEGF9Q9H1U4 602 aa16.01■□□□□ 0.15
PDLIM2-221ENST00000622702 FAM96BQ9Y3D0 163 aa16.01■□□□□ 0.15
PDLIM2-221ENST00000622702 HILPDAQ9Y5L2 63 aa16.01■□□□□ 0.15
PDLIM2-221ENST00000622702 SOX21Q9Y651 276 aaPredicted RBP16.01■□□□□ 0.15
PDLIM2-221ENST00000622702 ATRQ13535 2644 aa16■□□□□ 0.15
PDLIM2-221ENST00000622702 GPR31O00270 319 aa16■□□□□ 0.15
PDLIM2-221ENST00000622702 TCF21O43680 179 aa16■□□□□ 0.15
PDLIM2-221ENST00000622702 NDUFB6O95139 128 aa16■□□□□ 0.15
PDLIM2-221ENST00000622702 FBP1P09467 338 aa16■□□□□ 0.15
PDLIM2-221ENST00000622702 PGAM2P15259 253 aa16■□□□□ 0.15
PDLIM2-221ENST00000622702 BAMBIQ13145 260 aa16■□□□□ 0.15
PDLIM2-221ENST00000622702 EIF4EBP1Q13541 118 aaPredicted RBP16■□□□□ 0.15
PDLIM2-221ENST00000622702 KRTAP21-3Q3LHN1 58 aa16■□□□□ 0.15
PDLIM2-221ENST00000622702 ZFAND1Q8TCF1 268 aa16■□□□□ 0.15
PDLIM2-221ENST00000622702 ZNF418Q8TF45 676 aaPredicted RBP16■□□□□ 0.15
PDLIM2-221ENST00000622702 GPR132Q9UNW8 380 aa16■□□□□ 0.15
PDLIM2-221ENST00000622702 FBN1P35555 2871 aaKnown RBP15.99■□□□□ 0.15
PDLIM2-221ENST00000622702 A0A1W2PPI3 338 aa15.99■□□□□ 0.15
PDLIM2-221ENST00000622702 M0R1X1 148 aa15.99■□□□□ 0.15
PDLIM2-221ENST00000622702 CTSDP07339 412 aaPredicted RBP15.99■□□□□ 0.15
PDLIM2-221ENST00000622702 REG1BP48304 166 aa15.99■□□□□ 0.15
PDLIM2-221ENST00000622702 SRSF2Q01130 221 aaKnown RBP15.99■□□□□ 0.15
PDLIM2-221ENST00000622702 CMTM1Q8IZ96 169 aa15.99■□□□□ 0.15
PDLIM2-221ENST00000622702 ZDHHC22Q8N966 263 aa15.99■□□□□ 0.15
PDLIM2-221ENST00000622702 POC5Q8NA72 575 aa15.99■□□□□ 0.15
PDLIM2-221ENST00000622702 PRDM13Q9H4Q3 707 aa15.99■□□□□ 0.15
PDLIM2-221ENST00000622702 IGHV1-3A0A0C4DH29 117 aa15.98■□□□□ 0.15
PDLIM2-221ENST00000622702 CT45A6P0DMU7 189 aa15.98■□□□□ 0.15
PDLIM2-221ENST00000622702 CT45A5P0DMU8 189 aa15.98■□□□□ 0.15
PDLIM2-221ENST00000622702 CT45A7P0DMV0 189 aa15.98■□□□□ 0.15
PDLIM2-221ENST00000622702 HABP2Q14520 560 aaPredicted RBP15.98■□□□□ 0.15
PDLIM2-221ENST00000622702 HSD17B10Q99714 261 aaKnown RBP15.98■□□□□ 0.15
PDLIM2-221ENST00000622702 NABP2Q9BQ15 211 aa15.98■□□□□ 0.15
PDLIM2-221ENST00000622702 MRPL20Q9BYC9 149 aaKnown RBP15.98■□□□□ 0.15
PDLIM2-221ENST00000622702 DPAGT1Q9H3H5 408 aa15.98■□□□□ 0.15
PDLIM2-221ENST00000622702 FAM240BA0A1B0GVZ2 78 aa15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 VGLL3A8MV65 326 aa15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 PAX6P26367 422 aa15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 DUTP33316 252 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 ARHGDIBP52566 201 aa15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 RND3P61587 244 aa15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 AANATQ16613 207 aa15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 DEFB112Q30KQ8 113 aa15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 ZNF66Q6ZN08 573 aa15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 ADTRPQ96IZ2 230 aa15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 RTBDNQ9BSG5 229 aaPredicted RBP15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 C5orf66Q9H5L9 145 aa15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 SLC2A9Q9NRM0 540 aa15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 COPZ2Q9P299 210 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms