RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 IGKV1D-33P01593 117 aa9.93□□□□□ -0.82
C11orf54-215ENST00000617482 IGKV1-33P01594 117 aa9.93□□□□□ -0.82
C11orf54-215ENST00000617482 IGHV2-70P01814 119 aa9.93□□□□□ -0.82
C11orf54-215ENST00000617482 UBE2NP61088 152 aaKnown RBP9.93□□□□□ -0.82
C11orf54-215ENST00000617482 AESQ08117 197 aa9.93□□□□□ -0.82
C11orf54-215ENST00000617482 PSG7Q13046 419 aa9.93□□□□□ -0.82
C11orf54-215ENST00000617482 MRPL49Q13405 166 aaKnown RBP9.93□□□□□ -0.82
C11orf54-215ENST00000617482 CDPF1Q6NVV7 123 aa9.93□□□□□ -0.82
C11orf54-215ENST00000617482 RPP25LQ8N5L8 163 aaKnown RBP9.93□□□□□ -0.82
C11orf54-215ENST00000617482 OR52L2PQ8NGH6 319 aa9.93□□□□□ -0.82
C11orf54-215ENST00000617482 SSX3Q99909 188 aa9.93□□□□□ -0.82
C11orf54-215ENST00000617482 OR2D2Q9H210 308 aa9.93□□□□□ -0.82
C11orf54-215ENST00000617482 SLC39A9Q9NUM3 307 aa9.93□□□□□ -0.82
C11orf54-215ENST00000617482 GAR1Q9NY12 217 aaKnown RBP9.93□□□□□ -0.82
C11orf54-215ENST00000617482 CLN8Q9UBY8 286 aa9.93□□□□□ -0.82
C11orf54-215ENST00000617482 VAX2Q9UIW0 290 aa9.93□□□□□ -0.82
C11orf54-215ENST00000617482 WIPI2Q9Y4P8 454 aa9.93□□□□□ -0.82
C11orf54-215ENST00000617482 MDKP21741 143 aaPredicted RBP9.92□□□□□ -0.82
C11orf54-215ENST00000617482 S100A2P29034 98 aa9.92□□□□□ -0.82
C11orf54-215ENST00000617482 LINC00205P59089 165 aa9.92□□□□□ -0.82
C11orf54-215ENST00000617482 TNFRSF9Q07011 255 aa9.92□□□□□ -0.82
C11orf54-215ENST00000617482 GTF3C1Q12789 2109 aa9.92□□□□□ -0.82
C11orf54-215ENST00000617482 BTNL3Q6UXE8 466 aa9.92□□□□□ -0.82
C11orf54-215ENST00000617482 ABHD5Q8WTS1 349 aa9.92□□□□□ -0.82
C11orf54-215ENST00000617482 LHX4Q969G2 390 aa9.92□□□□□ -0.82
C11orf54-215ENST00000617482 SDF2L1Q9HCN8 221 aa9.92□□□□□ -0.82
C11orf54-215ENST00000617482 OBP2BQ9NPH6 170 aa9.92□□□□□ -0.82
C11orf54-215ENST00000617482 KCNIP1Q9NZI2 227 aa9.92□□□□□ -0.82
C11orf54-215ENST00000617482 C12orf77C9JDV5 145 aa9.92□□□□□ -0.82
C11orf54-215ENST00000617482 CLDN34H7C241 214 aa9.92□□□□□ -0.82
C11orf54-215ENST00000617482 NDUFS6O75380 124 aaKnown RBP9.92□□□□□ -0.82
C11orf54-215ENST00000617482 TNFSF15O95150 251 aa9.92□□□□□ -0.82
C11orf54-215ENST00000617482 PMP22Q01453 160 aa9.92□□□□□ -0.82
C11orf54-215ENST00000617482 DHRS13Q6UX07 377 aa9.92□□□□□ -0.82
C11orf54-215ENST00000617482 MRGPRGQ86SM5 289 aa9.92□□□□□ -0.82
C11orf54-215ENST00000617482 FRZBQ92765 325 aa9.92□□□□□ -0.82
C11orf54-215ENST00000617482 GALMQ96C23 342 aa9.92□□□□□ -0.82
C11orf54-215ENST00000617482 C5orf30Q96GV9 206 aa9.92□□□□□ -0.82
C11orf54-215ENST00000617482 ARHGAP21Q5T5U3 1957 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 CHD3Q12873 2000 aaKnown RBP9.91□□□□□ -0.82
C11orf54-215ENST00000617482 CYB5R3P00387 301 aaPredicted RBP9.91□□□□□ -0.82
C11orf54-215ENST00000617482 SOD3P08294 240 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 TRGC1P0CF51 173 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 IGHV1-2P23083 117 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 IL2RGP31785 369 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 MPV17P39210 176 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 NKX6-1P78426 367 aaPredicted RBP9.91□□□□□ -0.82
C11orf54-215ENST00000617482 ARG2P78540 354 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 PNRC1Q12796 327 aaPredicted RBP9.91□□□□□ -0.82
C11orf54-215ENST00000617482 SPINK9Q5DT21 86 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 C1orf87Q8N0U7 546 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 ZNF645Q8N7E2 425 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 OR10D4PQ8NGN7 298 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 PINX1Q96BK5 328 aaKnown RBP9.91□□□□□ -0.82
C11orf54-215ENST00000617482 GPR61Q9BZJ8 451 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 CFAP47Q6ZTR5 3102 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 RNF212BA8MTL3 300 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 S1PR2O95136 353 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 ZNF883P0CG24 379 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 CD81P60033 236 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 TMEM14EPQ6UXP3 125 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 TPRX1Q8N7U7 411 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 ZDHHC16Q969W1 377 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 FER1L6-AS2Q96M78 137 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 SLC25A22Q9H936 323 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 FZR1Q9UM11 496 aa9.91□□□□□ -0.82
C11orf54-215ENST00000617482 SPENQ96T58 3664 aaKnown RBP9.9□□□□□ -0.82
C11orf54-215ENST00000617482 DSPP15924 2871 aaKnown RBP9.9□□□□□ -0.82
C11orf54-215ENST00000617482 TMEM30CPA0ZSE6 113 aa9.9□□□□□ -0.82
C11orf54-215ENST00000617482 ODAMA1E959 279 aa9.9□□□□□ -0.82
C11orf54-215ENST00000617482 C17orf98A8MV24 154 aa9.9□□□□□ -0.82
C11orf54-215ENST00000617482 PPP1R2P9O14990 202 aa9.9□□□□□ -0.82
C11orf54-215ENST00000617482 RBMXL2O75526 392 aaKnown RBP9.9□□□□□ -0.82
C11orf54-215ENST00000617482 AGFG2O95081 481 aa9.9□□□□□ -0.82
C11orf54-215ENST00000617482 HBZP02008 142 aa9.9□□□□□ -0.82
C11orf54-215ENST00000617482 CD59P13987 128 aa9.9□□□□□ -0.82
C11orf54-215ENST00000617482 BRWD1-AS2P59051 145 aa9.9□□□□□ -0.82
C11orf54-215ENST00000617482 ADIRFQ15847 76 aa9.9□□□□□ -0.82
C11orf54-215ENST00000617482 ZNF766Q5HY98 468 aa9.9□□□□□ -0.82
C11orf54-215ENST00000617482 WDR25Q64LD2 544 aaPredicted RBP9.9□□□□□ -0.82
C11orf54-215ENST00000617482 ACSM6Q6P461 480 aa9.9□□□□□ -0.82
C11orf54-215ENST00000617482 Q6ZR03 302 aa9.9□□□□□ -0.82
C11orf54-215ENST00000617482 KLF14Q8TD94 323 aaPredicted RBP9.9□□□□□ -0.82
C11orf54-215ENST00000617482 MRGPRDQ8TDS7 321 aa9.9□□□□□ -0.82
C11orf54-215ENST00000617482 P2RX4Q99571 388 aa9.9□□□□□ -0.82
C11orf54-215ENST00000617482 SMIM7Q9BQ49 75 aa9.9□□□□□ -0.82
C11orf54-215ENST00000617482 UFSP2Q9NUQ7 469 aa9.9□□□□□ -0.82
C11orf54-215ENST00000617482 TMEM242Q9NWH2 141 aa9.9□□□□□ -0.82
C11orf54-215ENST00000617482 DEFB108AA8MXU0 73 aa9.9□□□□□ -0.83
C11orf54-215ENST00000617482 ZG16O60844 167 aa9.9□□□□□ -0.83
C11orf54-215ENST00000617482 WISP2O76076 250 aa9.9□□□□□ -0.83
C11orf54-215ENST00000617482 IFNA1P01562 189 aa9.9□□□□□ -0.83
C11orf54-215ENST00000617482 GABRA2P47869 451 aa9.9□□□□□ -0.83
C11orf54-215ENST00000617482 RPP30P78346 268 aaKnown RBP9.9□□□□□ -0.83
C11orf54-215ENST00000617482 TGFBR3Q03167 851 aa9.9□□□□□ -0.83
C11orf54-215ENST00000617482 NECAP1Q8NC96 275 aa9.9□□□□□ -0.83
C11orf54-215ENST00000617482 RFESDQ8TAC1 157 aa9.9□□□□□ -0.83
C11orf54-215ENST00000617482 GATAD1Q8WUU5 269 aa9.9□□□□□ -0.83
C11orf54-215ENST00000617482 RPUSD4Q96CM3 377 aaKnown RBP9.9□□□□□ -0.83
C11orf54-215ENST00000617482 HSPB7Q9UBY9 170 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms