RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 ZNF485Q8NCK3 441 aa17.76■□□□□ 0.43
MMP28-203ENST00000612672 FAAP24Q9BTP7 215 aa17.76■□□□□ 0.43
MMP28-203ENST00000612672 WFDC10AQ9H1F0 79 aa17.76■□□□□ 0.43
MMP28-203ENST00000612672 KCNK15Q9H427 330 aa17.76■□□□□ 0.43
MMP28-203ENST00000612672 ZNF355PQ9NSJ1 428 aa17.76■□□□□ 0.43
MMP28-203ENST00000612672 LOC100130705A0A1B0GUX0 176 aa17.75■□□□□ 0.43
MMP28-203ENST00000612672 H0Y980 276 aa17.75■□□□□ 0.43
MMP28-203ENST00000612672 DYNC1I1O14576 645 aa17.75■□□□□ 0.43
MMP28-203ENST00000612672 DYRK1AQ13627 763 aa17.75■□□□□ 0.43
MMP28-203ENST00000612672 OR10K2Q6IF99 312 aa17.75■□□□□ 0.43
MMP28-203ENST00000612672 ZNF880Q6PDB4 577 aa17.75■□□□□ 0.43
MMP28-203ENST00000612672 C6orf201Q7Z4U5 140 aa17.75■□□□□ 0.43
MMP28-203ENST00000612672 OR1A1Q9P1Q5 309 aa17.75■□□□□ 0.43
MMP28-203ENST00000612672 CKLFQ9UBR5 152 aa17.75■□□□□ 0.43
MMP28-203ENST00000612672 PCLOQ9Y6V0 5065 aa17.74■□□□□ 0.43
MMP28-203ENST00000612672 C13orf42A0A1B0GVH6 325 aa17.74■□□□□ 0.43
MMP28-203ENST00000612672 RBMY1BA6NDE4 496 aaKnown RBP17.74■□□□□ 0.43
MMP28-203ENST00000612672 RBMY1EA6NEQ0 496 aaKnown RBP17.74■□□□□ 0.43
MMP28-203ENST00000612672 RBBP9O75884 186 aa17.74■□□□□ 0.43
MMP28-203ENST00000612672 RBMY1DP0C7P1 496 aaKnown RBP17.74■□□□□ 0.43
MMP28-203ENST00000612672 MECP2P51608 486 aaKnown RBP17.74■□□□□ 0.43
MMP28-203ENST00000612672 PJVKQ0ZLH3 352 aa17.74■□□□□ 0.43
MMP28-203ENST00000612672 FXYD3Q14802 87 aa17.74■□□□□ 0.43
MMP28-203ENST00000612672 YIF1BQ5BJH7 314 aa17.74■□□□□ 0.43
MMP28-203ENST00000612672 TMPRSS11AQ6ZMR5 421 aa17.74■□□□□ 0.43
MMP28-203ENST00000612672 GTSCR1Q86UQ5 136 aa17.74■□□□□ 0.43
MMP28-203ENST00000612672 ZNF383Q8NA42 475 aa17.74■□□□□ 0.43
MMP28-203ENST00000612672 DERL3Q96Q80 235 aa17.74■□□□□ 0.43
MMP28-203ENST00000612672 STEAP1Q9UHE8 339 aa17.74■□□□□ 0.43
MMP28-203ENST00000612672 VPS13DQ5THJ4 4388 aa17.74■□□□□ 0.43
MMP28-203ENST00000612672 PNMA8CA0A1B0GUJ8 204 aa17.73■□□□□ 0.43
MMP28-203ENST00000612672 BRI3O95415 125 aa17.73■□□□□ 0.43
MMP28-203ENST00000612672 NAPSAO96009 420 aa17.73■□□□□ 0.43
MMP28-203ENST00000612672 DCKP27707 260 aa17.73■□□□□ 0.43
MMP28-203ENST00000612672 LINC00476Q8WZB0 136 aa17.73■□□□□ 0.43
MMP28-203ENST00000612672 SLC22A1O15245 554 aa17.72■□□□□ 0.43
MMP28-203ENST00000612672 SLC25A17O43808 307 aa17.72■□□□□ 0.43
MMP28-203ENST00000612672 CD40LGP29965 261 aa17.72■□□□□ 0.43
MMP28-203ENST00000612672 MC5RP33032 325 aa17.72■□□□□ 0.43
MMP28-203ENST00000612672 CAPGP40121 348 aa17.72■□□□□ 0.43
MMP28-203ENST00000612672 LCN12Q6JVE5 192 aa17.72■□□□□ 0.43
MMP28-203ENST00000612672 Q8N402 240 aa17.72■□□□□ 0.43
MMP28-203ENST00000612672 NICN1Q9BSH3 213 aa17.72■□□□□ 0.43
MMP28-203ENST00000612672 C11orf54Q9H0W9 315 aaPredicted RBP17.72■□□□□ 0.43
MMP28-203ENST00000612672 SHISA3A0PJX4 238 aa17.71■□□□□ 0.43
MMP28-203ENST00000612672 H3BUA1 57 aa17.71■□□□□ 0.43
MMP28-203ENST00000612672 IGLV2-23P01705 113 aa17.71■□□□□ 0.43
MMP28-203ENST00000612672 CD7P09564 240 aa17.71■□□□□ 0.43
MMP28-203ENST00000612672 EDN2P20800 178 aa17.71■□□□□ 0.43
MMP28-203ENST00000612672 CD81P60033 236 aa17.71■□□□□ 0.43
MMP28-203ENST00000612672 ZNF343Q6P1L6 599 aa17.71■□□□□ 0.43
MMP28-203ENST00000612672 CDH26Q8IXH8 852 aa17.71■□□□□ 0.43
MMP28-203ENST00000612672 DEFB125Q8N687 156 aa17.71■□□□□ 0.43
MMP28-203ENST00000612672 RNF5Q99942 180 aa17.71■□□□□ 0.43
MMP28-203ENST00000612672 HDHD3Q9BSH5 251 aaPredicted RBP17.71■□□□□ 0.43
MMP28-203ENST00000612672 SIGLEC8Q9NYZ4 499 aa17.71■□□□□ 0.43
MMP28-203ENST00000612672 ABRACLQ9P1F3 81 aa17.71■□□□□ 0.43
MMP28-203ENST00000612672 DIMT1Q9UNQ2 313 aaKnown RBP17.71■□□□□ 0.43
MMP28-203ENST00000612672 A0A0A6YYD4 124 aa17.7■□□□□ 0.42
MMP28-203ENST00000612672 CIB2O75838 187 aa17.7■□□□□ 0.42
MMP28-203ENST00000612672 SPDEFO95238 335 aa17.7■□□□□ 0.42
MMP28-203ENST00000612672 CPEP16870 476 aa17.7■□□□□ 0.42
MMP28-203ENST00000612672 HTR2CP28335 458 aa17.7■□□□□ 0.42
MMP28-203ENST00000612672 TINAGL1Q9GZM7 467 aaPredicted RBP17.7■□□□□ 0.42
MMP28-203ENST00000612672 PEF1Q9UBV8 284 aaKnown RBP17.7■□□□□ 0.42
MMP28-203ENST00000612672 LRRC42Q9Y546 428 aa17.7■□□□□ 0.42
MMP28-203ENST00000612672 CRYGBP07316 175 aa17.69■□□□□ 0.42
MMP28-203ENST00000612672 RPS16P62249 146 aaKnown RBP17.69■□□□□ 0.42
MMP28-203ENST00000612672 UNC119Q13432 240 aa17.69■□□□□ 0.42
MMP28-203ENST00000612672 INSL4Q14641 139 aa17.69■□□□□ 0.42
MMP28-203ENST00000612672 MRGPRG-AS1Q2M3A8 158 aa17.69■□□□□ 0.42
MMP28-203ENST00000612672 MOGAT2Q3SYC2 334 aa17.69■□□□□ 0.42
MMP28-203ENST00000612672 RNLSQ5VYX0 342 aa17.69■□□□□ 0.42
MMP28-203ENST00000612672 BVESQ8NE79 360 aa17.69■□□□□ 0.42
MMP28-203ENST00000612672 IL17DQ8TAD2 202 aa17.69■□□□□ 0.42
MMP28-203ENST00000612672 SETD6Q8TBK2 473 aa17.69■□□□□ 0.42
MMP28-203ENST00000612672 TSNAXQ99598 290 aaKnown RBP17.69■□□□□ 0.42
MMP28-203ENST00000612672 NEURL2Q9BR09 285 aa17.69■□□□□ 0.42
MMP28-203ENST00000612672 A0A0G2JLM5 398 aa17.68■□□□□ 0.42
MMP28-203ENST00000612672 ZNF785A8K8V0 405 aa17.68■□□□□ 0.42
MMP28-203ENST00000612672 ITGB1BP1O14713 200 aa17.68■□□□□ 0.42
MMP28-203ENST00000612672 APELAP0DMC3 54 aa17.68■□□□□ 0.42
MMP28-203ENST00000612672 RPS27AP62979 156 aaKnown RBP17.68■□□□□ 0.42
MMP28-203ENST00000612672 CD300EQ496F6 205 aaPredicted RBP17.68■□□□□ 0.42
MMP28-203ENST00000612672 NEDD4LQ96PU5 975 aa17.68■□□□□ 0.42
MMP28-203ENST00000612672 UQCC2Q9BRT2 126 aa17.68■□□□□ 0.42
MMP28-203ENST00000612672 EXOSC1Q9Y3B2 195 aaKnown RBP17.68■□□□□ 0.42
MMP28-203ENST00000612672 KIAA1109Q2LD37 5005 aa17.68■□□□□ 0.42
MMP28-203ENST00000612672 CEACAM6P40199 344 aa17.67■□□□□ 0.42
MMP28-203ENST00000612672 RASSF2P50749 326 aa17.67■□□□□ 0.42
MMP28-203ENST00000612672 RYR1P21817 5038 aa17.66■□□□□ 0.42
MMP28-203ENST00000612672 DNAH6Q9C0G6 4158 aa17.66■□□□□ 0.42
MMP28-203ENST00000612672 IGKV1-6A0A0C4DH72 117 aa17.66■□□□□ 0.42
MMP28-203ENST00000612672 BMPR1BO00238 502 aa17.66■□□□□ 0.42
MMP28-203ENST00000612672 HLA-DRB3P79483 266 aa17.66■□□□□ 0.42
MMP28-203ENST00000612672 NKAIN3Q8N8D7 197 aa17.66■□□□□ 0.42
MMP28-203ENST00000612672 C5orf30Q96GV9 206 aa17.66■□□□□ 0.42
MMP28-203ENST00000612672 C9orf16Q9BUW7 83 aa17.66■□□□□ 0.42
MMP28-203ENST00000612672 SRD5A3Q9H8P0 318 aa17.66■□□□□ 0.42
MMP28-203ENST00000612672 CHMP1AQ9HD42 196 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms