RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 LYG1Q8N1E2 194 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 TMEM54Q969K7 222 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 GSX1Q9H4S2 264 aaPredicted RBP12.55□□□□□ -0.4
VPS36-207ENST00000611132 PXMP4Q9Y6I8 212 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 TRGV10A0A0A0MS01 117 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 TRAV38-1A0A0B4J264 116 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 IGHV3-13P01766 116 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 IGHV3-7P01780 117 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 APCSP02743 223 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 EPHA8P29322 1005 aaPredicted RBP12.55□□□□□ -0.4
VPS36-207ENST00000611132 WNT16Q9UBV4 365 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 TIMM9Q9Y5J7 89 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 TRPM7Q96QT4 1865 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 EGR1P18146 543 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 OR1C1Q15619 314 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 LOXL2Q9Y4K0 774 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 RAB7AP51149 207 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 Q56UQ5 140 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 RIPPLY2Q5TAB7 128 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 FA2HQ7L5A8 372 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 OR8I2Q8N0Y5 310 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 SCCPDHQ8NBX0 429 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 TMEM242Q9NWH2 141 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 IL19Q9UHD0 177 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 HPRT1P00492 218 aa12.54□□□□□ -0.4
VPS36-207ENST00000611132 RPL23P62829 140 aaKnown RBP12.54□□□□□ -0.4
VPS36-207ENST00000611132 SLC35B1P78383 322 aa12.54□□□□□ -0.4
VPS36-207ENST00000611132 ID3Q02535 119 aa12.54□□□□□ -0.4
VPS36-207ENST00000611132 TRA2AQ13595 282 aaKnown RBP eCLIP12.54□□□□□ -0.4
VPS36-207ENST00000611132 TMEM170AQ8WVE7 144 aa12.54□□□□□ -0.4
VPS36-207ENST00000611132 C14orf144Q96I85 54 aa12.54□□□□□ -0.4
VPS36-207ENST00000611132 QTRT1Q9BXR0 403 aaKnown RBP12.54□□□□□ -0.4
VPS36-207ENST00000611132 WNT5BQ9H1J7 359 aa12.54□□□□□ -0.4
VPS36-207ENST00000611132 OR1A1Q9P1Q5 309 aa12.54□□□□□ -0.4
VPS36-207ENST00000611132 NPY1RP25929 384 aa12.54□□□□□ -0.4
VPS36-207ENST00000611132 IL3RAP26951 378 aa12.54□□□□□ -0.4
VPS36-207ENST00000611132 TWSG1Q9GZX9 223 aa12.54□□□□□ -0.4
VPS36-207ENST00000611132 HES4Q9HCC6 221 aa12.54□□□□□ -0.4
VPS36-207ENST00000611132 NPVFQ9HCQ7 196 aa12.54□□□□□ -0.4
VPS36-207ENST00000611132 IGHV2-70P01814 119 aa12.54□□□□□ -0.4
VPS36-207ENST00000611132 SLC25A5P05141 298 aaKnown RBP12.54□□□□□ -0.4
VPS36-207ENST00000611132 VWCEQ96DN2 955 aa12.54□□□□□ -0.4
VPS36-207ENST00000611132 WDR54Q9H977 334 aa12.54□□□□□ -0.4
VPS36-207ENST00000611132 IL36GQ9NZH8 169 aa12.54□□□□□ -0.4
VPS36-207ENST00000611132 OR6C3Q9NZP0 311 aa12.54□□□□□ -0.4
VPS36-207ENST00000611132 CELA2AP08217 269 aa12.54□□□□□ -0.4
VPS36-207ENST00000611132 ZNF525Q8N782 197 aa12.54□□□□□ -0.4
VPS36-207ENST00000611132 SFRP2Q96HF1 295 aa12.54□□□□□ -0.4
VPS36-207ENST00000611132 PLA2G3Q9NZ20 509 aa12.54□□□□□ -0.4
VPS36-207ENST00000611132 YTHDF2Q9Y5A9 579 aaKnown RBP12.54□□□□□ -0.4
VPS36-207ENST00000611132 SRCAPQ6ZRS2 3230 aa12.53□□□□□ -0.4
VPS36-207ENST00000611132 TCF20Q9UGU0 1960 aaKnown RBP12.53□□□□□ -0.4
VPS36-207ENST00000611132 CEACAM18A8MTB9 384 aa12.53□□□□□ -0.4
VPS36-207ENST00000611132 PROB1E7EW31 1015 aa12.53□□□□□ -0.4
VPS36-207ENST00000611132 J3QR89 54 aa12.53□□□□□ -0.4
VPS36-207ENST00000611132 HINT1P49773 126 aaPredicted RBP12.53□□□□□ -0.4
VPS36-207ENST00000611132 AESQ08117 197 aa12.53□□□□□ -0.4
VPS36-207ENST00000611132 DMWDQ09019 674 aa12.53□□□□□ -0.4
VPS36-207ENST00000611132 LRRC29Q8WV35 223 aa12.53□□□□□ -0.4
VPS36-207ENST00000611132 LYZL4Q96KX0 146 aa12.53□□□□□ -0.4
VPS36-207ENST00000611132 PRDM14Q9GZV8 571 aa12.53□□□□□ -0.4
VPS36-207ENST00000611132 SEBOXQ9HB31 216 aaPredicted RBP12.53□□□□□ -0.4
VPS36-207ENST00000611132 PMS2P1A4D2B8 440 aa12.53□□□□□ -0.4
VPS36-207ENST00000611132 ZG16O60844 167 aa12.53□□□□□ -0.4
VPS36-207ENST00000611132 AMBPP02760 352 aa12.53□□□□□ -0.4
VPS36-207ENST00000611132 GTF2H5Q6ZYL4 71 aa12.53□□□□□ -0.4
VPS36-207ENST00000611132 RNF144BQ7Z419 303 aa12.53□□□□□ -0.4
VPS36-207ENST00000611132 ZNF784Q8NCA9 323 aaPredicted RBP12.53□□□□□ -0.4
VPS36-207ENST00000611132 OR2Z1Q8NG97 314 aa12.53□□□□□ -0.4
VPS36-207ENST00000611132 WDYHV1Q96HA8 205 aa12.53□□□□□ -0.4
VPS36-207ENST00000611132 DUSP15Q9H1R2 295 aaPredicted RBP12.53□□□□□ -0.4
VPS36-207ENST00000611132 GLRX2Q9NS18 164 aa12.53□□□□□ -0.4
VPS36-207ENST00000611132 IGHV5-10-1A0A0J9YXX1 117 aa12.53□□□□□ -0.4
VPS36-207ENST00000611132 SERTM2A0A1B0GWG4 89 aa12.53□□□□□ -0.4
VPS36-207ENST00000611132 LRRC30A6NM36 301 aa12.53□□□□□ -0.4
VPS36-207ENST00000611132 ZNHIT1O43257 154 aa12.53□□□□□ -0.4
VPS36-207ENST00000611132 CALHM1Q8IU99 346 aa12.53□□□□□ -0.4
VPS36-207ENST00000611132 ZCCHC14Q8WYQ9 949 aaKnown RBP12.53□□□□□ -0.4
VPS36-207ENST00000611132 hCG_38984A0A1B0GV85 526 aa12.52□□□□□ -0.4
VPS36-207ENST00000611132 OR10X1Q8NGY0 326 aa12.52□□□□□ -0.4
VPS36-207ENST00000611132 OR2H2O95918 312 aa12.52□□□□□ -0.41
VPS36-207ENST00000611132 GZMHP20718 246 aa12.52□□□□□ -0.41
VPS36-207ENST00000611132 CBLN1P23435 193 aa12.52□□□□□ -0.41
VPS36-207ENST00000611132 CTSSP25774 331 aa12.52□□□□□ -0.41
VPS36-207ENST00000611132 P2RY6Q15077 328 aa12.52□□□□□ -0.41
VPS36-207ENST00000611132 CXXC4Q9H2H0 198 aa12.52□□□□□ -0.41
VPS36-207ENST00000611132 DYNLRB1Q9NP97 96 aa12.52□□□□□ -0.41
VPS36-207ENST00000611132 HLA-DQA1P01909 254 aa12.52□□□□□ -0.41
VPS36-207ENST00000611132 SNRPCP09234 159 aaKnown RBP12.52□□□□□ -0.41
VPS36-207ENST00000611132 DEFA4P12838 97 aa12.52□□□□□ -0.41
VPS36-207ENST00000611132 MFAP2P55001 183 aa12.52□□□□□ -0.41
VPS36-207ENST00000611132 SPINK14Q6IE38 97 aa12.52□□□□□ -0.41
VPS36-207ENST00000611132 RNF2Q99496 336 aa12.52□□□□□ -0.41
VPS36-207ENST00000611132 ADH4P08319 380 aa12.52□□□□□ -0.41
VPS36-207ENST00000611132 PMCHL1Q16048 86 aa12.52□□□□□ -0.41
VPS36-207ENST00000611132 MIC13Q5XKP0 118 aa12.52□□□□□ -0.41
VPS36-207ENST00000611132 ZNF645Q8N7E2 425 aa12.52□□□□□ -0.41
VPS36-207ENST00000611132 OR52L2PQ8NGH6 319 aa12.52□□□□□ -0.41
VPS36-207ENST00000611132 IL36RNQ9UBH0 155 aa12.52□□□□□ -0.41
VPS36-207ENST00000611132 R4GN57 208 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms