RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 AGMATQ9BSE5 352 aa11.34□□□□□ -0.59
NEK3-205ENST00000610828 IL19Q9UHD0 177 aa11.34□□□□□ -0.59
NEK3-205ENST00000610828 METTL15P1P0C7V9 234 aa11.34□□□□□ -0.59
NEK3-205ENST00000610828 SELLP14151 372 aa11.34□□□□□ -0.59
NEK3-205ENST00000610828 GATA4P43694 442 aa11.34□□□□□ -0.59
NEK3-205ENST00000610828 BRWD1-AS2P59051 145 aa11.34□□□□□ -0.59
NEK3-205ENST00000610828 SLC25A24Q6NUK1 477 aa11.34□□□□□ -0.59
NEK3-205ENST00000610828 GNPNAT1Q96EK6 184 aaPredicted RBP11.34□□□□□ -0.59
NEK3-205ENST00000610828 EIF5A2Q9GZV4 153 aaKnown RBP11.34□□□□□ -0.59
NEK3-205ENST00000610828 ELOVL5Q9NYP7 299 aa11.34□□□□□ -0.59
NEK3-205ENST00000610828 RNF7Q9UBF6 113 aa11.34□□□□□ -0.59
NEK3-205ENST00000610828 PCNX1Q96RV3 2341 aa11.34□□□□□ -0.59
NEK3-205ENST00000610828 LINC00473A8K010 186 aa11.33□□□□□ -0.6
NEK3-205ENST00000610828 UMAD1C9J7I0 102 aa11.33□□□□□ -0.6
NEK3-205ENST00000610828 DFFBO76075 338 aa11.33□□□□□ -0.6
NEK3-205ENST00000610828 SNAPINO95295 136 aa11.33□□□□□ -0.6
NEK3-205ENST00000610828 CYB5R3P00387 301 aaPredicted RBP11.33□□□□□ -0.6
NEK3-205ENST00000610828 UBE2KP61086 200 aa11.33□□□□□ -0.6
NEK3-205ENST00000610828 GUK1Q16774 197 aa11.33□□□□□ -0.6
NEK3-205ENST00000610828 COMMD1Q8N668 190 aa11.33□□□□□ -0.6
NEK3-205ENST00000610828 EDARADDQ8WWZ3 215 aa11.33□□□□□ -0.6
NEK3-205ENST00000610828 ABHD14AQ9BUJ0 271 aa11.33□□□□□ -0.6
NEK3-205ENST00000610828 COA4Q9NYJ1 87 aa11.33□□□□□ -0.6
NEK3-205ENST00000610828 IGHV3-7P01780 117 aa11.33□□□□□ -0.6
NEK3-205ENST00000610828 FAM87AP0C7U9 286 aa11.33□□□□□ -0.6
NEK3-205ENST00000610828 TNFSF4P23510 183 aa11.33□□□□□ -0.6
NEK3-205ENST00000610828 PPT1P50897 306 aa11.33□□□□□ -0.6
NEK3-205ENST00000610828 MSMO1Q15800 293 aa11.33□□□□□ -0.6
NEK3-205ENST00000610828 SPANXN5Q5MJ07 72 aa11.33□□□□□ -0.6
NEK3-205ENST00000610828 TMEM88Q6PEY1 159 aa11.33□□□□□ -0.6
NEK3-205ENST00000610828 ZNF66Q6ZN08 573 aa11.33□□□□□ -0.6
NEK3-205ENST00000610828 DEFB108BQ8NET1 73 aa11.33□□□□□ -0.6
NEK3-205ENST00000610828 NUP37Q8NFH4 326 aa11.33□□□□□ -0.6
NEK3-205ENST00000610828 SEBOXQ9HB31 216 aaPredicted RBP11.33□□□□□ -0.6
NEK3-205ENST00000610828 DSCAMO60469 2012 aa11.32□□□□□ -0.6
NEK3-205ENST00000610828 FAM157AC9JC47 383 aa11.32□□□□□ -0.6
NEK3-205ENST00000610828 GPR37O15354 613 aa11.32□□□□□ -0.6
NEK3-205ENST00000610828 IFNA5P01569 189 aa11.32□□□□□ -0.6
NEK3-205ENST00000610828 PTAFRP25105 342 aa11.32□□□□□ -0.6
NEK3-205ENST00000610828 GPR12P47775 334 aa11.32□□□□□ -0.6
NEK3-205ENST00000610828 TNFRSF9Q07011 255 aa11.32□□□□□ -0.6
NEK3-205ENST00000610828 MORN2Q502X0 79 aa11.32□□□□□ -0.6
NEK3-205ENST00000610828 HSD17B10Q99714 261 aaKnown RBP11.32□□□□□ -0.6
NEK3-205ENST00000610828 JPT1Q9UK76 154 aa11.32□□□□□ -0.6
NEK3-205ENST00000610828 FAM90A26D6RGX4 464 aa11.32□□□□□ -0.6
NEK3-205ENST00000610828 NPBWR1P48145 328 aa11.32□□□□□ -0.6
NEK3-205ENST00000610828 BSPH1Q075Z2 132 aa11.32□□□□□ -0.6
NEK3-205ENST00000610828 DUX4L9Q6RFH8 374 aaPredicted RBP11.32□□□□□ -0.6
NEK3-205ENST00000610828 THNSL2Q86YJ6 484 aa11.32□□□□□ -0.6
NEK3-205ENST00000610828 C14orf79Q96F83 325 aa11.32□□□□□ -0.6
NEK3-205ENST00000610828 ZNF835Q9Y2P0 537 aa11.32□□□□□ -0.6
NEK3-205ENST00000610828 FBXO7Q9Y3I1 522 aa11.32□□□□□ -0.6
NEK3-205ENST00000610828 KALRNO60229 2985 aa11.32□□□□□ -0.6
NEK3-205ENST00000610828 DPRXA6NFQ7 191 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 RBMXL2O75526 392 aaKnown RBP11.31□□□□□ -0.6
NEK3-205ENST00000610828 TAS2R30P59541 319 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 CCL8P80075 99 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 ARL16Q0P5N6 197 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 PEA15Q15121 130 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 CR1LQ2VPA4 569 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 AKR1C8PQ5T2L2 129 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 LILRB2Q8N423 598 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 ZNF561Q8N587 486 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 TCTEX1D1Q8N7M0 179 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 FAM222BQ8WU58 562 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 RBKSQ9H477 322 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 OR6C3Q9NZP0 311 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 LRRC30A6NM36 301 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 YPEL1O60688 119 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 CLDN14O95500 239 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 THBDP07204 575 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 P0C879 139 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 LOXL3P58215 753 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 HBG1P69891 147 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 HBG2P69892 147 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 H2BFWTQ7Z2G1 175 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 TGIF2LYQ8IUE0 185 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 YPEL2Q96QA6 119 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.31□□□□□ -0.6
NEK3-205ENST00000610828 CALYQ9NYX4 217 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 HSPB7Q9UBY9 170 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 LAMP3Q9UQV4 416 aa11.31□□□□□ -0.6
NEK3-205ENST00000610828 PTPRQQ9UMZ3 2332 aa11.3□□□□□ -0.6
NEK3-205ENST00000610828 OR4A8P0C604 315 aa11.3□□□□□ -0.6
NEK3-205ENST00000610828 IRF2P14316 349 aa11.3□□□□□ -0.6
NEK3-205ENST00000610828 NCR3LG1Q68D85 454 aa11.3□□□□□ -0.6
NEK3-205ENST00000610828 HAPLN4Q86UW8 402 aa11.3□□□□□ -0.6
NEK3-205ENST00000610828 CBLN2Q8IUK8 224 aa11.3□□□□□ -0.6
NEK3-205ENST00000610828 CLRN3Q8NCR9 226 aa11.3□□□□□ -0.6
NEK3-205ENST00000610828 LFNGQ8NES3 379 aa11.3□□□□□ -0.6
NEK3-205ENST00000610828 PBDC1Q9BVG4 233 aa11.3□□□□□ -0.6
NEK3-205ENST00000610828 SCRT1Q9BWW7 348 aa11.3□□□□□ -0.6
NEK3-205ENST00000610828 FAM234AQ9H0X4 552 aa11.3□□□□□ -0.6
NEK3-205ENST00000610828 JKAMPQ9P055 326 aa11.3□□□□□ -0.6
NEK3-205ENST00000610828 MARCH11A6NNE9 402 aa11.3□□□□□ -0.6
NEK3-205ENST00000610828 F2RL2O00254 374 aa11.3□□□□□ -0.6
NEK3-205ENST00000610828 PROP1O75360 226 aa11.3□□□□□ -0.6
NEK3-205ENST00000610828 GYPAP02724 150 aa11.3□□□□□ -0.6
NEK3-205ENST00000610828 H2AFB1P0C5Y9 115 aa11.3□□□□□ -0.6
NEK3-205ENST00000610828 DUTP33316 252 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms