RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 DUX4L4P0CJ87 422 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 DUX4L5P0CJ88 424 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 DUX4L6P0CJ89 424 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 DUX4L7P0CJ90 424 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 PRKACBP22694 351 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 ERP29P30040 261 aaKnown RBP2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 PRDX2P32119 198 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 ATP6V1E1P36543 226 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 KIR3DL2P43630 455 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 HAAOP46952 286 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 GABRA2P47869 451 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 RBP2P50120 134 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 ACTA2P62736 377 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 ACTG2P63267 376 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 ELF3P78545 371 aaPredicted RBP2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 MEF2CQ06413 473 aaPredicted RBP2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 RAB40BQ12829 278 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 UBE2V2Q15819 145 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 RNLSQ5VYX0 342 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 LPCAT4Q643R3 524 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 HCP5Q6MZN7 132 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 DUX4L9Q6RFH8 374 aaPredicted RBP2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 CCDC121Q6ZUS5 278 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 FAM220AQ7Z4H9 259 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 MKXQ8IYA7 352 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 Q8IYB0 196 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 ENTHD1Q8IYW4 607 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 SAXO1Q8IYX7 474 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 CBR4Q8N4T8 237 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 ACBD7Q8N6N7 88 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 CD177Q8N6Q3 437 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 GVQW1Q8N7I0 195 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 ZSCAN4Q8NAM6 433 aaPredicted RBP2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR10H4Q8NGA5 316 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 RPS4Y2Q8TD47 263 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 BORCS8Q96FH0 119 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 MRPL48Q96GC5 212 aaKnown RBP2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 CEP19Q96LK0 163 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 Q96MT0 163 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 RAB40CQ96S21 281 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 C9orf16Q9BUW7 83 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 CDCA4Q9BXL8 241 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 TTTY10Q9BZA0 68 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 CHIAQ9BZP6 476 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 RIBC2Q9H4K1 309 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 C16orf95Q9H693 158 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 PLEKHA1Q9HB21 404 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 BEX1Q9HBH7 125 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 FGF20Q9NP95 211 aaPredicted RBP2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 C8orf4Q9NR00 106 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 INPP5EQ9NRR6 644 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 IMPAD1Q9NX62 359 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 MTCH1Q9NZJ7 389 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 ZNRD1Q9P1U0 126 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 DUX4Q9UBX2 424 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 HHLA2Q9UM44 414 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 SLC7A11Q9UPY5 501 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 ORC6Q9Y5N6 252 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 SOX21Q9Y651 276 aaPredicted RBP2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 IGKV1-9A0A0C4DH69 117 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 TRBV2A0A0J9YWF9 115 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 LOC100130705A0A1B0GUX0 176 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 LOC107986453A0A1B0GWG9 222 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 DAPL1A0PJW8 107 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 TMEM212A6NML5 194 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 VGLL3A8MV65 326 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 NPFFO15130 113 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 RPP14O95059 124 aaKnown RBP2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 BAG2O95816 211 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 FADS2O95864 444 aaKnown RBP2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 CYB5AP00167 134 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 CSN2P05814 226 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 HTR1AP08908 422 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 CCDC159P0C7I6 412 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR9G9P0C7N8 305 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 ZNF728P0DKX0 622 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 DBTP11182 482 aaKnown RBP2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 ATF1P18846 271 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 MDKP21741 143 aaPredicted RBP2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 CALRP27797 417 aaKnown RBP2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 SAA4P35542 130 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 TGFBR2P37173 567 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 KIR2DS4P43632 304 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 DYNLT3P51808 116 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 ATP1B3P54709 279 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 RAG2P55895 527 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 DLX6P56179 175 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR12D2P58182 307 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 RPL31P62899 125 aaKnown RBP2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 PAX5Q02548 391 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 PDZK1IP1Q13113 114 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 MEF2DQ14814 521 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 TAF9Q16594 264 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 ZSCAN26Q16670 478 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 CCDC58Q4VC31 144 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 TP53I3Q53FA7 332 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 DMRTC1Q5HYR2 192 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 SPIN3Q5JUX0 258 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 OLFML2AQ68BL7 652 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 BAIAP2L2Q6UXY1 529 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms