RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 ARRDC1Q8N5I2 433 aa13.3□□□□□ -0.28
SHKBP1-219ENST00000599575 DRAM1Q8N682 238 aa13.3□□□□□ -0.28
SHKBP1-219ENST00000599575 ZNF645Q8N7E2 425 aa13.3□□□□□ -0.28
SHKBP1-219ENST00000599575 ZBTB34Q8NCN2 500 aa13.3□□□□□ -0.28
SHKBP1-219ENST00000599575 OR56B4Q8NH76 319 aa13.3□□□□□ -0.28
SHKBP1-219ENST00000599575 ABHD14BQ96IU4 210 aa13.3□□□□□ -0.28
SHKBP1-219ENST00000599575 ADTRPQ96IZ2 230 aa13.3□□□□□ -0.28
SHKBP1-219ENST00000599575 OR2D2Q9H210 308 aa13.3□□□□□ -0.28
SHKBP1-219ENST00000599575 V9GYH0 126 aa13.3□□□□□ -0.28
SHKBP1-219ENST00000599575 OR2F2O95006 317 aa13.29□□□□□ -0.28
SHKBP1-219ENST00000599575 PPYP01298 95 aa13.29□□□□□ -0.28
SHKBP1-219ENST00000599575 HLA-DMAP28067 261 aa13.29□□□□□ -0.28
SHKBP1-219ENST00000599575 HRH1P35367 487 aa13.29□□□□□ -0.28
SHKBP1-219ENST00000599575 REG1BP48304 166 aa13.29□□□□□ -0.28
SHKBP1-219ENST00000599575 DGCR2P98153 550 aa13.29□□□□□ -0.28
SHKBP1-219ENST00000599575 ZNF45Q02386 682 aa13.29□□□□□ -0.28
SHKBP1-219ENST00000599575 LSAMPQ13449 338 aa13.29□□□□□ -0.28
SHKBP1-219ENST00000599575 CNPY1Q3B7I2 92 aa13.29□□□□□ -0.28
SHKBP1-219ENST00000599575 RNASE10Q5GAN6 216 aaKnown RBP13.29□□□□□ -0.28
SHKBP1-219ENST00000599575 OR2T10Q8NGZ9 312 aa13.29□□□□□ -0.28
SHKBP1-219ENST00000599575 CAPSLQ8WWF8 208 aa13.29□□□□□ -0.28
SHKBP1-219ENST00000599575 RNF5Q99942 180 aa13.29□□□□□ -0.28
SHKBP1-219ENST00000599575 NABP2Q9BQ15 211 aa13.29□□□□□ -0.28
SHKBP1-219ENST00000599575 RANBP3Q9H6Z4 567 aaPredicted RBP13.29□□□□□ -0.28
SHKBP1-219ENST00000599575 PTTG2Q9NZH5 202 aa13.29□□□□□ -0.28
SHKBP1-219ENST00000599575 A0A1B0GUS0 222 aa13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 FAM181BA6NEQ2 426 aa13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 NDUFA7O95182 113 aa13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 MOSP00540 346 aa13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 CD74P04233 296 aa13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 IFNA6P05013 189 aa13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 PAX6P26367 422 aa13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 RFX2P48378 723 aa13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 RAB13P51153 203 aa13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 AP3S2P59780 193 aa13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 HERV-K104P61576 105 aa13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 TSPAN5P62079 268 aa13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 MEF2DQ14814 521 aa13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 ZNF660Q6AZW8 331 aaPredicted RBP13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 DHRS7BQ6IAN0 325 aaPredicted RBP13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 LPCAT3Q6P1A2 487 aa13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 GDPD1Q8N9F7 314 aa13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 OR5AN1Q8NGI8 311 aa13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 RBM14Q96PK6 669 aaKnown RBP13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 DUX5Q96PT3 197 aa13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 NPFFR1Q9GZQ6 430 aa13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 SDHAF2Q9NX18 166 aa13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 RNF150Q9ULK6 438 aa13.28□□□□□ -0.28
SHKBP1-219ENST00000599575 FGF16O43320 207 aa13.27□□□□□ -0.29
SHKBP1-219ENST00000599575 PMP2P02689 132 aa13.27□□□□□ -0.29
SHKBP1-219ENST00000599575 SNRNP70P08621 437 aaKnown RBP13.27□□□□□ -0.29
SHKBP1-219ENST00000599575 CT45A6P0DMU7 189 aa13.27□□□□□ -0.29
SHKBP1-219ENST00000599575 CT45A5P0DMU8 189 aa13.27□□□□□ -0.29
SHKBP1-219ENST00000599575 CT45A7P0DMV0 189 aa13.27□□□□□ -0.29
SHKBP1-219ENST00000599575 HKR1P10072 659 aa13.27□□□□□ -0.29
SHKBP1-219ENST00000599575 RRASP10301 218 aa13.27□□□□□ -0.29
SHKBP1-219ENST00000599575 AADACP22760 399 aa13.27□□□□□ -0.29
SHKBP1-219ENST00000599575 THBS3P49746 956 aa13.27□□□□□ -0.29
SHKBP1-219ENST00000599575 HES1Q14469 280 aa13.27□□□□□ -0.29
SHKBP1-219ENST00000599575 PYDC2Q56P42 97 aa13.27□□□□□ -0.29
SHKBP1-219ENST00000599575 RPL39P5Q59GN2 51 aa13.27□□□□□ -0.29
SHKBP1-219ENST00000599575 Q8N402 240 aa13.27□□□□□ -0.29
SHKBP1-219ENST00000599575 MOB3AQ96BX8 217 aa13.27□□□□□ -0.29
SHKBP1-219ENST00000599575 HSD17B10Q99714 261 aaKnown RBP13.27□□□□□ -0.29
SHKBP1-219ENST00000599575 THAP7Q9BT49 309 aaPredicted RBP13.27□□□□□ -0.29
SHKBP1-219ENST00000599575 MRPL20Q9BYC9 149 aaKnown RBP13.27□□□□□ -0.29
SHKBP1-219ENST00000599575 TNFRSF19Q9NS68 423 aa13.27□□□□□ -0.29
SHKBP1-219ENST00000599575 C1RLQ9NZP8 487 aa13.27□□□□□ -0.29
SHKBP1-219ENST00000599575 PROP1O75360 226 aa13.26□□□□□ -0.29
SHKBP1-219ENST00000599575 TSPAN9O75954 239 aa13.26□□□□□ -0.29
SHKBP1-219ENST00000599575 IGKV1D-33P01593 117 aa13.26□□□□□ -0.29
SHKBP1-219ENST00000599575 IGKV1-33P01594 117 aa13.26□□□□□ -0.29
SHKBP1-219ENST00000599575 APOA2P02652 100 aa13.26□□□□□ -0.29
SHKBP1-219ENST00000599575 CD3DP04234 171 aa13.26□□□□□ -0.29
SHKBP1-219ENST00000599575 FCER2P06734 321 aa13.26□□□□□ -0.29
SHKBP1-219ENST00000599575 TMEM11P17152 192 aa13.26□□□□□ -0.29
SHKBP1-219ENST00000599575 FOXL1Q12952 345 aa13.26□□□□□ -0.29
SHKBP1-219ENST00000599575 ZNF79Q15937 498 aa13.26□□□□□ -0.29
SHKBP1-219ENST00000599575 LY6EQ16553 131 aa13.26□□□□□ -0.29
SHKBP1-219ENST00000599575 STEAP1BQ6NZ63 245 aa13.26□□□□□ -0.29
SHKBP1-219ENST00000599575 ZNF66Q6ZN08 573 aa13.26□□□□□ -0.29
SHKBP1-219ENST00000599575 EAF1Q96JC9 268 aaPredicted RBP13.26□□□□□ -0.29
SHKBP1-219ENST00000599575 ZNF2Q9BSG1 426 aaPredicted RBP13.26□□□□□ -0.29
SHKBP1-219ENST00000599575 WASHC3Q9Y3C0 194 aa13.26□□□□□ -0.29
SHKBP1-219ENST00000599575 FBN1P35555 2871 aaKnown RBP13.25□□□□□ -0.29
SHKBP1-219ENST00000599575 ANKRD20A5PA0PJZ0 165 aa13.25□□□□□ -0.29
SHKBP1-219ENST00000599575 M0R1X1 148 aa13.25□□□□□ -0.29
SHKBP1-219ENST00000599575 RAB3DO95716 219 aa13.25□□□□□ -0.29
SHKBP1-219ENST00000599575 AKAIN1P0CW23 69 aa13.25□□□□□ -0.29
SHKBP1-219ENST00000599575 FAUP35544 74 aaKnown RBP13.25□□□□□ -0.29
SHKBP1-219ENST00000599575 ECI1P42126 302 aa13.25□□□□□ -0.29
SHKBP1-219ENST00000599575 UCP3P55916 312 aa13.25□□□□□ -0.29
SHKBP1-219ENST00000599575 CBX3Q13185 183 aa13.25□□□□□ -0.29
SHKBP1-219ENST00000599575 KRTAP24-1Q3LI83 254 aa13.25□□□□□ -0.29
SHKBP1-219ENST00000599575 C11orf88Q6PI97 169 aa13.25□□□□□ -0.29
SHKBP1-219ENST00000599575 CCBE1Q6UXH8 406 aaPredicted RBP13.25□□□□□ -0.29
SHKBP1-219ENST00000599575 PDPNQ86YL7 162 aa13.25□□□□□ -0.29
SHKBP1-219ENST00000599575 Q8N6K4 173 aa13.25□□□□□ -0.29
SHKBP1-219ENST00000599575 OR4C13Q8NGP0 309 aa13.25□□□□□ -0.29
SHKBP1-219ENST00000599575 OR4F5Q8NH21 305 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms