RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 GNG2P59768 71 aa13.81□□□□□ -0.2
SHKBP1-203ENST00000594298 VBP1P61758 197 aa13.81□□□□□ -0.2
SHKBP1-203ENST00000594298 SLC35B1P78383 322 aa13.81□□□□□ -0.2
SHKBP1-203ENST00000594298 FAM71F2Q6NXP2 309 aa13.81□□□□□ -0.2
SHKBP1-203ENST00000594298 Q6ZS49 121 aa13.81□□□□□ -0.2
SHKBP1-203ENST00000594298 C8orf86Q6ZUL3 223 aa13.81□□□□□ -0.2
SHKBP1-203ENST00000594298 OR10J5Q8NHC4 309 aa13.81□□□□□ -0.2
SHKBP1-203ENST00000594298 SLC25A46Q96AG3 418 aa13.81□□□□□ -0.2
SHKBP1-203ENST00000594298 S100A16Q96FQ6 103 aaKnown RBP13.81□□□□□ -0.2
SHKBP1-203ENST00000594298 COL7A1Q02388 2944 aa13.81□□□□□ -0.2
SHKBP1-203ENST00000594298 TRAV18A0A075B6X5 111 aa13.8□□□□□ -0.2
SHKBP1-203ENST00000594298 MOSP00540 346 aa13.8□□□□□ -0.2
SHKBP1-203ENST00000594298 NCS1P62166 190 aa13.8□□□□□ -0.2
SHKBP1-203ENST00000594298 HNF4GQ14541 408 aa13.8□□□□□ -0.2
SHKBP1-203ENST00000594298 ZNF260Q3ZCT1 412 aa13.8□□□□□ -0.2
SHKBP1-203ENST00000594298 C18orf65Q6ZTR6 163 aa13.8□□□□□ -0.2
SHKBP1-203ENST00000594298 OR8H1Q8NGG4 311 aa13.8□□□□□ -0.2
SHKBP1-203ENST00000594298 C11orf54Q9H0W9 315 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-203ENST00000594298 OR1A1Q9P1Q5 309 aa13.8□□□□□ -0.2
SHKBP1-203ENST00000594298 IGHV3-72A0A0B4J1Y9 119 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 NUDT19A8MXV4 375 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 BET1O15155 118 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 ST8SIA5O15466 376 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 CTXN2P0C2S0 81 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 GSTT2P0CG29 244 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 GSTT2BP0CG30 244 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 ALDH3B2P48448 385 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 DGCR2P98153 550 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 UBE2NLQ5JXB2 153 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 GPR107Q5VW38 600 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 ZNF833PQ6ZTB9 187 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 SLC35E3Q7Z769 313 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 ZNF695Q8IW36 515 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 FOXRED2Q8IWF2 684 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 ODF3L1Q8IXM7 274 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 STPG2Q8N412 459 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 KLHL30-AS1Q8NEE0 82 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 ACOT12Q8WYK0 555 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 SLC25A38Q96DW6 304 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 EAF1Q96JC9 268 aaPredicted RBP13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 CABLES2Q9BTV7 478 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 ST6GALNAC5Q9BVH7 336 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 TOLLIPQ9H0E2 274 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 ABCG5Q9H222 651 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 IFI27L2Q9H2X8 130 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 RDH8Q9NYR8 311 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 ZNF230Q9UIE0 474 aaPredicted RBP13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 ZNF221Q9UK13 617 aa13.79□□□□□ -0.2
SHKBP1-203ENST00000594298 SAA2-SAA4A0A096LPE2 208 aa13.78□□□□□ -0.2
SHKBP1-203ENST00000594298 TRBV6-7A0A0A0MS04 114 aa13.78□□□□□ -0.2
SHKBP1-203ENST00000594298 IGKV1-6A0A0C4DH72 117 aa13.78□□□□□ -0.2
SHKBP1-203ENST00000594298 TMEM235A6NFC5 223 aa13.78□□□□□ -0.2
SHKBP1-203ENST00000594298 NCBP2LA6PVI3 153 aaKnown RBP13.78□□□□□ -0.2
SHKBP1-203ENST00000594298 RAMP3O60896 148 aa13.78□□□□□ -0.2
SHKBP1-203ENST00000594298 GABARAPO95166 117 aa13.78□□□□□ -0.2
SHKBP1-203ENST00000594298 TFAP2AP05549 437 aa13.78□□□□□ -0.2
SHKBP1-203ENST00000594298 NHLRC4P0CG21 123 aaPredicted RBP13.78□□□□□ -0.2
SHKBP1-203ENST00000594298 SAA2P0DJI9 122 aaPredicted RBP13.78□□□□□ -0.2
SHKBP1-203ENST00000594298 RORCP51449 518 aa13.78□□□□□ -0.2
SHKBP1-203ENST00000594298 CMTM3Q96MX0 182 aa13.78□□□□□ -0.2
SHKBP1-203ENST00000594298 GINS4Q9BRT9 223 aa13.78□□□□□ -0.2
SHKBP1-203ENST00000594298 LINC00527Q9UJ94 153 aa13.78□□□□□ -0.2
SHKBP1-203ENST00000594298 XRCC3O43542 346 aa13.77□□□□□ -0.21
SHKBP1-203ENST00000594298 GPR12P47775 334 aa13.77□□□□□ -0.21
SHKBP1-203ENST00000594298 OR3A3P47888 321 aa13.77□□□□□ -0.21
SHKBP1-203ENST00000594298 LSAMPQ13449 338 aa13.77□□□□□ -0.21
SHKBP1-203ENST00000594298 IGSF11Q5DX21 431 aa13.77□□□□□ -0.21
SHKBP1-203ENST00000594298 TEX38Q6PEX7 206 aa13.77□□□□□ -0.21
SHKBP1-203ENST00000594298 SAMD12Q8N8I0 201 aa13.77□□□□□ -0.21
SHKBP1-203ENST00000594298 NUDCD2Q8WVJ2 157 aa13.77□□□□□ -0.21
SHKBP1-203ENST00000594298 MAFIPQ8WZ33 124 aa13.77□□□□□ -0.21
SHKBP1-203ENST00000594298 AP3S1Q92572 193 aa13.77□□□□□ -0.21
SHKBP1-203ENST00000594298 NABP2Q9BQ15 211 aa13.77□□□□□ -0.21
SHKBP1-203ENST00000594298 AGMATQ9BSE5 352 aa13.77□□□□□ -0.21
SHKBP1-203ENST00000594298 ELF5Q9UKW6 265 aaPredicted RBP13.77□□□□□ -0.21
SHKBP1-203ENST00000594298 CCL24O00175 119 aa13.76□□□□□ -0.21
SHKBP1-203ENST00000594298 AP4M1O00189 453 aa13.76□□□□□ -0.21
SHKBP1-203ENST00000594298 MC5RP33032 325 aa13.76□□□□□ -0.21
SHKBP1-203ENST00000594298 CBX5P45973 191 aa13.76□□□□□ -0.21
SHKBP1-203ENST00000594298 CTF1Q16619 201 aa13.76□□□□□ -0.21
SHKBP1-203ENST00000594298 MZT2AQ6P582 158 aa13.76□□□□□ -0.21
SHKBP1-203ENST00000594298 Q8N6K4 173 aa13.76□□□□□ -0.21
SHKBP1-203ENST00000594298 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.76□□□□□ -0.21
SHKBP1-203ENST00000594298 RAX2Q96IS3 184 aa13.76□□□□□ -0.21
SHKBP1-203ENST00000594298 ABHD14BQ96IU4 210 aa13.76□□□□□ -0.21
SHKBP1-203ENST00000594298 RASL11BQ9BPW5 248 aa13.76□□□□□ -0.21
SHKBP1-203ENST00000594298 GON7Q9BXV9 100 aa13.76□□□□□ -0.21
SHKBP1-203ENST00000594298 MRPL20Q9BYC9 149 aaKnown RBP13.76□□□□□ -0.21
SHKBP1-203ENST00000594298 PARP12Q9H0J9 701 aaKnown RBP13.76□□□□□ -0.21
SHKBP1-203ENST00000594298 AUNIPQ9H7T9 357 aa13.76□□□□□ -0.21
SHKBP1-203ENST00000594298 LIN7CQ9NUP9 197 aaKnown RBP13.76□□□□□ -0.21
SHKBP1-203ENST00000594298 RNF150Q9ULK6 438 aa13.76□□□□□ -0.21
SHKBP1-203ENST00000594298 RBM7Q9Y580 266 aaKnown RBP13.76□□□□□ -0.21
SHKBP1-203ENST00000594298 SMIM31A0A1B0GVY4 71 aa13.75□□□□□ -0.21
SHKBP1-203ENST00000594298 LINC01548A6NM66 108 aa13.75□□□□□ -0.21
SHKBP1-203ENST00000594298 ZNF736B4DX44 427 aaPredicted RBP13.75□□□□□ -0.21
SHKBP1-203ENST00000594298 RPL5P46777 297 aaKnown RBP13.75□□□□□ -0.21
SHKBP1-203ENST00000594298 CNIH2Q6PI25 160 aa13.75□□□□□ -0.21
SHKBP1-203ENST00000594298 RNF152Q8N8N0 203 aa13.75□□□□□ -0.21
SHKBP1-203ENST00000594298 ZNF251Q9BRH9 671 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms