RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 SNX10Q9Y5X0 201 aa0.99□□□□□ -2.25
SMCHD1-207ENST00000581711 MACF1Q9UPN3 7388 aaKnown RBP0.99□□□□□ -2.25
SMCHD1-207ENST00000581711 USP24Q9UPU5 2620 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 GOLGA8QA0A0J9YX86 632 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 LOC100506127A0A0U1RQW1 187 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 UGT2B11O75310 529 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 PGLYRP1O75594 196 aaPredicted RBP0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 IVLP07476 585 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 KCNJ3P48549 501 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 TAS2R45P59539 299 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 RAB8AP61006 207 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 HERVK_113P63121 156 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 TBC1D28Q2M2D7 210 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 Q3ZCU0 254 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 HSP90B2PQ58FF3 399 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 AMTNQ6UX39 209 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 ATP5L2Q7Z4Y8 100 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 PACRGLQ8N7B6 248 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 OR51H1Q8NH63 302 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 DYNC2LI1Q8TCX1 351 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 C10orf105Q8TEF2 133 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 CCDC12Q8WUD4 166 aaPredicted RBP0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 CYTH2Q99418 400 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 UGT2B28Q9BY64 529 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 GNB1LQ9BYB4 327 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 GLS2Q9UI32 602 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 STK38LQ9Y2H1 464 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 NUMA1Q14980 2115 aa0.98□□□□□ -2.25
SMCHD1-207ENST00000581711 A0A1W2PQD3 144 aa0.97□□□□□ -2.25
SMCHD1-207ENST00000581711 MRASO14807 208 aa0.97□□□□□ -2.25
SMCHD1-207ENST00000581711 UBE2L6O14933 153 aa0.97□□□□□ -2.25
SMCHD1-207ENST00000581711 ADAP1O75689 374 aa0.97□□□□□ -2.25
SMCHD1-207ENST00000581711 PSMG1O95456 288 aa0.97□□□□□ -2.25
SMCHD1-207ENST00000581711 APOA1P02647 267 aa0.97□□□□□ -2.25
SMCHD1-207ENST00000581711 AGTR1P30556 359 aa0.97□□□□□ -2.25
SMCHD1-207ENST00000581711 OR10J1P30954 320 aa0.97□□□□□ -2.25
SMCHD1-207ENST00000581711 DLX6P56179 175 aa0.97□□□□□ -2.25
SMCHD1-207ENST00000581711 SLC35E3Q7Z769 313 aa0.97□□□□□ -2.25
SMCHD1-207ENST00000581711 OR8B12Q8NGG6 310 aa0.97□□□□□ -2.25
SMCHD1-207ENST00000581711 OR5J2Q8NH18 312 aa0.97□□□□□ -2.25
SMCHD1-207ENST00000581711 LHFPL5Q8TAF8 219 aa0.97□□□□□ -2.25
SMCHD1-207ENST00000581711 SLC35G5Q96KT7 338 aa0.97□□□□□ -2.25
SMCHD1-207ENST00000581711 ACBD6Q9BR61 282 aa0.97□□□□□ -2.25
SMCHD1-207ENST00000581711 CHD5Q8TDI0 1954 aa0.97□□□□□ -2.25
SMCHD1-207ENST00000581711 PTPRBP23467 1997 aa0.96□□□□□ -2.26
SMCHD1-207ENST00000581711 AHNAKQ09666 5890 aaKnown RBP0.96□□□□□ -2.26
SMCHD1-207ENST00000581711 NOTCH1P46531 2555 aa0.96□□□□□ -2.26
SMCHD1-207ENST00000581711 TRGV5A0A0B4J1U4 118 aa0.96□□□□□ -2.26
SMCHD1-207ENST00000581711 F5H5K5 113 aa0.96□□□□□ -2.26
SMCHD1-207ENST00000581711 C1QCP02747 245 aa0.96□□□□□ -2.26
SMCHD1-207ENST00000581711 S100A9P06702 114 aaKnown RBP0.96□□□□□ -2.26
SMCHD1-207ENST00000581711 IDH3GP51553 393 aaPredicted RBP0.96□□□□□ -2.26
SMCHD1-207ENST00000581711 TMEM155Q4W5P6 130 aa0.96□□□□□ -2.26
SMCHD1-207ENST00000581711 PABPC1L2AQ5JQF8 200 aa0.96□□□□□ -2.26
SMCHD1-207ENST00000581711 SPATA12Q7Z6I5 190 aa0.96□□□□□ -2.26
SMCHD1-207ENST00000581711 DAND5Q8N907 189 aa0.96□□□□□ -2.26
SMCHD1-207ENST00000581711 OR51B6Q9H340 312 aa0.96□□□□□ -2.26
SMCHD1-207ENST00000581711 HHLA3Q9XRX5 114 aa0.96□□□□□ -2.26
SMCHD1-207ENST00000581711 DISP1Q96F81 1524 aa0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 GSTZ1O43708 216 aaPredicted RBP0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 ZNF737O75373 536 aa0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 HBZP02008 142 aa0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 PVALBP20472 110 aaPredicted RBP0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 GRPRP30550 384 aa0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 CA7P43166 264 aa0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 TAS2R30P59541 319 aa0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 TMEM267Q0VDI3 215 aaPredicted RBP0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 FBXO48Q5FWF7 155 aa0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 RBM48Q5RL73 367 aaKnown RBP0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 COPS6Q7L5N1 327 aa0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 C1orf174Q8IYL3 243 aa0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 NATD1Q8N6N6 113 aa0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 OR51T1Q8NGJ9 327 aa0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 ASB17Q8WXJ9 295 aa0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 ZNF75CPQ92670 426 aaPredicted RBP0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 RNASE6Q93091 150 aaKnown RBP0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 Q96M85 177 aa0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 TMEM208Q9BTX3 173 aa0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 ASCL3Q9NQ33 180 aa0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 BABAM2Q9NXR7 383 aa0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 ANGPT4Q9Y264 503 aa0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 MYH11P35749 1972 aa0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 UBR4Q5T4S7 5183 aa0.95□□□□□ -2.26
SMCHD1-207ENST00000581711 NUP153P49790 1475 aaKnown RBP0.94□□□□□ -2.26
SMCHD1-207ENST00000581711 LIN7AO14910 233 aaPredicted RBP0.94□□□□□ -2.26
SMCHD1-207ENST00000581711 SYNGR1O43759 233 aa0.94□□□□□ -2.26
SMCHD1-207ENST00000581711 RD3LP0DJH9 198 aa0.94□□□□□ -2.26
SMCHD1-207ENST00000581711 CCR2P41597 374 aa0.94□□□□□ -2.26
SMCHD1-207ENST00000581711 STC1P52823 247 aa0.94□□□□□ -2.26
SMCHD1-207ENST00000581711 RELAQ04206 551 aa0.94□□□□□ -2.26
SMCHD1-207ENST00000581711 SCGB1D4Q6XE38 83 aa0.94□□□□□ -2.26
SMCHD1-207ENST00000581711 SLC13A5Q86YT5 568 aaPredicted RBP0.94□□□□□ -2.26
SMCHD1-207ENST00000581711 BLIDQ8IZY5 108 aa0.94□□□□□ -2.26
SMCHD1-207ENST00000581711 CLDND2Q8NHS1 167 aa0.94□□□□□ -2.26
SMCHD1-207ENST00000581711 PPWD1Q96BP3 646 aaKnown RBP0.94□□□□□ -2.26
SMCHD1-207ENST00000581711 TTTY13Q9BZ97 58 aa0.94□□□□□ -2.26
SMCHD1-207ENST00000581711 NKX6-2Q9C056 277 aaPredicted RBP0.94□□□□□ -2.26
SMCHD1-207ENST00000581711 UBQLN4Q9NRR5 601 aa0.94□□□□□ -2.26
SMCHD1-207ENST00000581711 MS4A12Q9NXJ0 267 aa0.94□□□□□ -2.26
SMCHD1-207ENST00000581711 COL6A3P12111 3177 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 181.2 ms