RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 BLOC1S6Q9UL45 172 aa10.72□□□□□ -0.69
RAB40B-204ENST00000571554 GAB2Q9UQC2 676 aa10.72□□□□□ -0.69
RAB40B-204ENST00000571554 KCNK7Q9Y2U2 307 aa10.72□□□□□ -0.69
RAB40B-204ENST00000571554 WASHC3Q9Y3C0 194 aa10.72□□□□□ -0.69
RAB40B-204ENST00000571554 A0A1W2PN81 502 aa10.71□□□□□ -0.69
RAB40B-204ENST00000571554 OR5H14A6NHG9 310 aa10.71□□□□□ -0.69
RAB40B-204ENST00000571554 RRHO14718 337 aa10.71□□□□□ -0.69
RAB40B-204ENST00000571554 PROP1O75360 226 aa10.71□□□□□ -0.69
RAB40B-204ENST00000571554 GNB3P16520 340 aa10.71□□□□□ -0.69
RAB40B-204ENST00000571554 MYL9P24844 172 aa10.71□□□□□ -0.69
RAB40B-204ENST00000571554 CHRNA7P36544 502 aa10.71□□□□□ -0.69
RAB40B-204ENST00000571554 GNB1P62873 340 aa10.71□□□□□ -0.69
RAB40B-204ENST00000571554 KIAA0141Q14154 515 aaPredicted RBP10.71□□□□□ -0.69
RAB40B-204ENST00000571554 C22orf42Q6IC83 251 aa10.71□□□□□ -0.69
RAB40B-204ENST00000571554 OR5M8Q8NGP6 311 aa10.71□□□□□ -0.69
RAB40B-204ENST00000571554 EDARADDQ8WWZ3 215 aa10.71□□□□□ -0.69
RAB40B-204ENST00000571554 RAB3CQ96E17 227 aa10.71□□□□□ -0.69
RAB40B-204ENST00000571554 FAM103A1Q9BTL3 118 aaKnown RBP10.71□□□□□ -0.69
RAB40B-204ENST00000571554 ALX4Q9H161 411 aaPredicted RBP10.71□□□□□ -0.69
RAB40B-204ENST00000571554 NDUFB11Q9NX14 153 aa10.71□□□□□ -0.69
RAB40B-204ENST00000571554 RDH8Q9NYR8 311 aa10.71□□□□□ -0.69
RAB40B-204ENST00000571554 ZNF230Q9UIE0 474 aaPredicted RBP10.71□□□□□ -0.69
RAB40B-204ENST00000571554 RAB22AQ9UL26 194 aa10.71□□□□□ -0.69
RAB40B-204ENST00000571554 RAB26Q9ULW5 256 aa10.71□□□□□ -0.69
RAB40B-204ENST00000571554 COL7A1Q02388 2944 aa10.7□□□□□ -0.7
RAB40B-204ENST00000571554 SEC14L6B5MCN3 397 aa10.7□□□□□ -0.7
RAB40B-204ENST00000571554 TRDCB7Z8K6 153 aa10.7□□□□□ -0.7
RAB40B-204ENST00000571554 PDCD5O14737 125 aa10.7□□□□□ -0.7
RAB40B-204ENST00000571554 BET1O15155 118 aa10.7□□□□□ -0.7
RAB40B-204ENST00000571554 SOX15O60248 233 aa10.7□□□□□ -0.7
RAB40B-204ENST00000571554 ATP6V1G2O95670 118 aa10.7□□□□□ -0.7
RAB40B-204ENST00000571554 IGLV1-40P01703 118 aa10.7□□□□□ -0.7
RAB40B-204ENST00000571554 CX3CL1P78423 397 aa10.7□□□□□ -0.7
RAB40B-204ENST00000571554 MRPS15P82914 257 aaKnown RBP10.7□□□□□ -0.7
RAB40B-204ENST00000571554 IGSF11Q5DX21 431 aa10.7□□□□□ -0.7
RAB40B-204ENST00000571554 NR2C2APQ86WQ0 139 aa10.7□□□□□ -0.7
RAB40B-204ENST00000571554 ZNF491Q8N8L2 437 aa10.7□□□□□ -0.7
RAB40B-204ENST00000571554 ZNF383Q8NA42 475 aa10.7□□□□□ -0.7
RAB40B-204ENST00000571554 OR5AN1Q8NGI8 311 aa10.7□□□□□ -0.7
RAB40B-204ENST00000571554 MYOZ3Q8TDC0 251 aa10.7□□□□□ -0.7
RAB40B-204ENST00000571554 PRR25Q96S07 402 aa10.7□□□□□ -0.7
RAB40B-204ENST00000571554 TPSG1Q9NRR2 321 aa10.7□□□□□ -0.7
RAB40B-204ENST00000571554 METTL1Q9UBP6 276 aaKnown RBP10.7□□□□□ -0.7
RAB40B-204ENST00000571554 ZNF221Q9UK13 617 aa10.7□□□□□ -0.7
RAB40B-204ENST00000571554 ZNF580Q9UK33 172 aa10.7□□□□□ -0.7
RAB40B-204ENST00000571554 MGAT4AQ9UM21 535 aa10.7□□□□□ -0.7
RAB40B-204ENST00000571554 TRAV1-2A0A0B4J238 106 aa10.69□□□□□ -0.7
RAB40B-204ENST00000571554 IFITM5A6NNB3 132 aa10.69□□□□□ -0.7
RAB40B-204ENST00000571554 M0R1X1 148 aa10.69□□□□□ -0.7
RAB40B-204ENST00000571554 ITGB1BP1O14713 200 aa10.69□□□□□ -0.7
RAB40B-204ENST00000571554 FABP7O15540 132 aa10.69□□□□□ -0.7
RAB40B-204ENST00000571554 IGKV1-16P04430 117 aa10.69□□□□□ -0.7
RAB40B-204ENST00000571554 FCGR3AP08637 254 aa10.69□□□□□ -0.7
RAB40B-204ENST00000571554 GSTT2P0CG29 244 aa10.69□□□□□ -0.7
RAB40B-204ENST00000571554 GSTT2BP0CG30 244 aa10.69□□□□□ -0.7
RAB40B-204ENST00000571554 RAB3BP20337 219 aa10.69□□□□□ -0.7
RAB40B-204ENST00000571554 PSMB9P28065 219 aa10.69□□□□□ -0.7
RAB40B-204ENST00000571554 RAB9AP51151 201 aa10.69□□□□□ -0.7
RAB40B-204ENST00000571554 PSMD7P51665 324 aa10.69□□□□□ -0.7
RAB40B-204ENST00000571554 DGCR2P98153 550 aa10.69□□□□□ -0.7
RAB40B-204ENST00000571554 FHL3Q13643 280 aa10.69□□□□□ -0.7
RAB40B-204ENST00000571554 PSG5Q15238 335 aa10.69□□□□□ -0.7
RAB40B-204ENST00000571554 ASPHD1Q5U4P2 390 aa10.69□□□□□ -0.7
RAB40B-204ENST00000571554 OR1N2Q8NGR9 330 aa10.69□□□□□ -0.7
RAB40B-204ENST00000571554 OR10R2Q8NGX6 335 aa10.69□□□□□ -0.7
RAB40B-204ENST00000571554 ELF5Q9UKW6 265 aaPredicted RBP10.69□□□□□ -0.7
RAB40B-204ENST00000571554 VSIG4Q9Y279 399 aa10.69□□□□□ -0.7
RAB40B-204ENST00000571554 TRDV1A0A1B0GX56 115 aa10.68□□□□□ -0.7
RAB40B-204ENST00000571554 I3L521 148 aa10.68□□□□□ -0.7
RAB40B-204ENST00000571554 CA2P00918 260 aa10.68□□□□□ -0.7
RAB40B-204ENST00000571554 TFAP2AP05549 437 aa10.68□□□□□ -0.7
RAB40B-204ENST00000571554 OR8U9P0C7N5 309 aa10.68□□□□□ -0.7
RAB40B-204ENST00000571554 EGR2P11161 476 aaPredicted RBP10.68□□□□□ -0.7
RAB40B-204ENST00000571554 MC5RP33032 325 aa10.68□□□□□ -0.7
RAB40B-204ENST00000571554 ECI1P42126 302 aa10.68□□□□□ -0.7
RAB40B-204ENST00000571554 RPS16P62249 146 aaKnown RBP10.68□□□□□ -0.7
RAB40B-204ENST00000571554 CD69Q07108 199 aa10.68□□□□□ -0.7
RAB40B-204ENST00000571554 ZNF260Q3ZCT1 412 aa10.68□□□□□ -0.7
RAB40B-204ENST00000571554 C19orf54Q5BKX5 351 aa10.68□□□□□ -0.7
RAB40B-204ENST00000571554 C9orf66Q5T8R8 295 aa10.68□□□□□ -0.7
RAB40B-204ENST00000571554 CD200R1LQ6Q8B3 271 aa10.68□□□□□ -0.7
RAB40B-204ENST00000571554 MINDY2Q8NBR6 621 aa10.68□□□□□ -0.7
RAB40B-204ENST00000571554 PTX4Q96A99 478 aa10.68□□□□□ -0.7
RAB40B-204ENST00000571554 UBE2E2Q96LR5 201 aa10.68□□□□□ -0.7
RAB40B-204ENST00000571554 MS4A10Q96PG2 267 aa10.68□□□□□ -0.7
RAB40B-204ENST00000571554 OR2D2Q9H210 308 aa10.68□□□□□ -0.7
RAB40B-204ENST00000571554 FOXA2Q9Y261 457 aaPredicted RBP10.68□□□□□ -0.7
RAB40B-204ENST00000571554 RAB27BO00194 218 aa10.67□□□□□ -0.7
RAB40B-204ENST00000571554 MFNGO00587 321 aa10.67□□□□□ -0.7
RAB40B-204ENST00000571554 SLC25A17O43808 307 aa10.67□□□□□ -0.7
RAB40B-204ENST00000571554 RBBP9O75884 186 aa10.67□□□□□ -0.7
RAB40B-204ENST00000571554 IGHV3-11P01762 117 aa10.67□□□□□ -0.7
RAB40B-204ENST00000571554 APOA2P02652 100 aa10.67□□□□□ -0.7
RAB40B-204ENST00000571554 HIST1H1DP16402 221 aaKnown RBP10.67□□□□□ -0.7
RAB40B-204ENST00000571554 GADD45AP24522 165 aa10.67□□□□□ -0.7
RAB40B-204ENST00000571554 GABARAPL2P60520 117 aa10.67□□□□□ -0.7
RAB40B-204ENST00000571554 ZNF616Q08AN1 781 aa10.67□□□□□ -0.7
RAB40B-204ENST00000571554 ARFRP1Q13795 201 aa10.67□□□□□ -0.7
RAB40B-204ENST00000571554 ZNF660Q6AZW8 331 aaPredicted RBP10.67□□□□□ -0.7
RAB40B-204ENST00000571554 UNQ5815/PRO19632Q6UWF5 114 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms