RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 ZNF596Q8TC21 504 aa15.31■□□□□ 0.04
COMMD4-213ENST00000565834 HSD17B10Q99714 261 aaKnown RBP15.31■□□□□ 0.04
COMMD4-213ENST00000565834 SIRT7Q9NRC8 400 aa15.31■□□□□ 0.04
COMMD4-213ENST00000565834 LIN7CQ9NUP9 197 aaKnown RBP15.31■□□□□ 0.04
COMMD4-213ENST00000565834 ZNRD1Q9P1U0 126 aa15.31■□□□□ 0.04
COMMD4-213ENST00000565834 MGAT4CQ9UBM8 478 aa15.31■□□□□ 0.04
COMMD4-213ENST00000565834 SHPKQ9UHJ6 478 aa15.31■□□□□ 0.04
COMMD4-213ENST00000565834 A0A096LNT2 108 aa15.3■□□□□ 0.04
COMMD4-213ENST00000565834 M0R1X1 148 aa15.3■□□□□ 0.04
COMMD4-213ENST00000565834 B3GALNT1O75752 331 aa15.3■□□□□ 0.04
COMMD4-213ENST00000565834 ZNF16P17020 682 aaPredicted RBP15.3■□□□□ 0.04
COMMD4-213ENST00000565834 PRTN3P24158 256 aa15.3■□□□□ 0.04
COMMD4-213ENST00000565834 COX7A1P24310 79 aa15.3■□□□□ 0.04
COMMD4-213ENST00000565834 CATR1Q13166 79 aa15.3■□□□□ 0.04
COMMD4-213ENST00000565834 ZNF66Q6ZN08 573 aa15.3■□□□□ 0.04
COMMD4-213ENST00000565834 OR13D1Q8NGV5 346 aa15.3■□□□□ 0.04
COMMD4-213ENST00000565834 GLYATL2Q8WU03 294 aa15.3■□□□□ 0.04
COMMD4-213ENST00000565834 TNFRSF14Q92956 283 aa15.3■□□□□ 0.04
COMMD4-213ENST00000565834 TMEM222Q9H0R3 208 aa15.3■□□□□ 0.04
COMMD4-213ENST00000565834 CCNKO75909 580 aa15.29■□□□□ 0.04
COMMD4-213ENST00000565834 CXCL3P19876 107 aa15.29■□□□□ 0.04
COMMD4-213ENST00000565834 DVL1P1P54792 670 aaPredicted RBP15.29■□□□□ 0.04
COMMD4-213ENST00000565834 PRRX1P54821 245 aa15.29■□□□□ 0.04
COMMD4-213ENST00000565834 PRB3Q04118 309 aaPredicted RBP15.29■□□□□ 0.04
COMMD4-213ENST00000565834 LIAT1Q6ZQX7 453 aa15.29■□□□□ 0.04
COMMD4-213ENST00000565834 S1PR3Q99500 378 aa15.29■□□□□ 0.04
COMMD4-213ENST00000565834 NEURL2Q9BR09 285 aa15.29■□□□□ 0.04
COMMD4-213ENST00000565834 SIRPDQ9H106 197 aa15.29■□□□□ 0.04
COMMD4-213ENST00000565834 GOSR2O14653 212 aa15.28■□□□□ 0.04
COMMD4-213ENST00000565834 PROP1O75360 226 aa15.28■□□□□ 0.04
COMMD4-213ENST00000565834 SRPXP78539 464 aa15.28■□□□□ 0.04
COMMD4-213ENST00000565834 VMO1Q7Z5L0 202 aa15.28■□□□□ 0.04
COMMD4-213ENST00000565834 KRTAP1-3Q8IUG1 177 aa15.28■□□□□ 0.04
COMMD4-213ENST00000565834 PNKDQ8N490 385 aa15.28■□□□□ 0.04
COMMD4-213ENST00000565834 TCTEX1D2Q8WW35 142 aa15.28■□□□□ 0.04
COMMD4-213ENST00000565834 HEXA-AS1Q9H8Q6 139 aa15.28■□□□□ 0.04
COMMD4-213ENST00000565834 UNKLQ9H9P5 680 aaKnown RBP15.28■□□□□ 0.04
COMMD4-213ENST00000565834 INSIG2Q9Y5U4 225 aa15.28■□□□□ 0.04
COMMD4-213ENST00000565834 DBX1A6NMT0 343 aa15.28■□□□□ 0.04
COMMD4-213ENST00000565834 A8MV72 311 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-213ENST00000565834 RNF223E7ERA6 249 aa15.28■□□□□ 0.04
COMMD4-213ENST00000565834 UCP1P25874 307 aa15.28■□□□□ 0.04
COMMD4-213ENST00000565834 IL3RAP26951 378 aa15.28■□□□□ 0.04
COMMD4-213ENST00000565834 DUTP33316 252 aaKnown RBP15.28■□□□□ 0.04
COMMD4-213ENST00000565834 RPL30P62888 115 aaKnown RBP15.28■□□□□ 0.04
COMMD4-213ENST00000565834 CD83Q01151 205 aa15.28■□□□□ 0.04
COMMD4-213ENST00000565834 LOXL1Q08397 574 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-213ENST00000565834 C2orf68Q2NKX9 166 aa15.28■□□□□ 0.04
COMMD4-213ENST00000565834 LGI3Q8N145 548 aa15.28■□□□□ 0.04
COMMD4-213ENST00000565834 BEND2Q8NDZ0 799 aa15.28■□□□□ 0.04
COMMD4-213ENST00000565834 MSI2Q96DH6 328 aaKnown RBP15.28■□□□□ 0.04
COMMD4-213ENST00000565834 Q96MF0 132 aa15.28■□□□□ 0.04
COMMD4-213ENST00000565834 ZNF251Q9BRH9 671 aa15.28■□□□□ 0.04
COMMD4-213ENST00000565834 REG4Q9BYZ8 158 aa15.28■□□□□ 0.04
COMMD4-213ENST00000565834 PDZD2O15018 2839 aa15.27■□□□□ 0.04
COMMD4-213ENST00000565834 B4DSR2 109 aa15.27■□□□□ 0.03
COMMD4-213ENST00000565834 TOX4O94842 621 aa15.27■□□□□ 0.03
COMMD4-213ENST00000565834 IGLV1-47P01700 117 aa15.27■□□□□ 0.03
COMMD4-213ENST00000565834 SERPINE2P07093 398 aa15.27■□□□□ 0.03
COMMD4-213ENST00000565834 MSMBP08118 114 aa15.27■□□□□ 0.03
COMMD4-213ENST00000565834 HLA-DRB5Q30154 266 aa15.27■□□□□ 0.03
COMMD4-213ENST00000565834 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.27■□□□□ 0.032e-10■■■■■ 30.4
COMMD4-213ENST00000565834 C1orf229Q6ZS94 237 aaPredicted RBP15.27■□□□□ 0.03
COMMD4-213ENST00000565834 LRTM2Q8N967 370 aa15.27■□□□□ 0.03
COMMD4-213ENST00000565834 PCGF1Q9BSM1 259 aa15.27■□□□□ 0.03
COMMD4-213ENST00000565834 LINC00473A8K010 186 aa15.26■□□□□ 0.03
COMMD4-213ENST00000565834 MMP9P14780 707 aa15.26■□□□□ 0.03
COMMD4-213ENST00000565834 ZNF833PQ6ZTB9 187 aa15.26■□□□□ 0.03
COMMD4-213ENST00000565834 TCTEX1D1Q8N7M0 179 aa15.26■□□□□ 0.03
COMMD4-213ENST00000565834 OR11H6Q8NGC7 330 aa15.26■□□□□ 0.03
COMMD4-213ENST00000565834 TMEM186Q96B77 213 aa15.26■□□□□ 0.03
COMMD4-213ENST00000565834 C1orf159Q96HA4 380 aa15.26■□□□□ 0.03
COMMD4-213ENST00000565834 TMEM56Q96MV1 263 aa15.26■□□□□ 0.03
COMMD4-213ENST00000565834 RAB18Q9NP72 206 aa15.26■□□□□ 0.03
COMMD4-213ENST00000565834 AMMECR1Q9Y4X0 333 aaPredicted RBP15.26■□□□□ 0.03
COMMD4-213ENST00000565834 TMEM56-RWDD3S4R434 201 aa15.26■□□□□ 0.03
COMMD4-213ENST00000565834 CCDC168Q8NDH2 2452 aa15.26■□□□□ 0.03
COMMD4-213ENST00000565834 PRRC2AP48634 2157 aaKnown RBP15.26■□□□□ 0.03
COMMD4-213ENST00000565834 CR1P17927 2039 aa15.26■□□□□ 0.03
COMMD4-213ENST00000565834 CCSO14618 274 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 ZNF137PP52743 207 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 KLRD1Q13241 179 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 OR2B11Q5JQS5 317 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 TMEM268Q5VZI3 342 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 NCR3LG1Q68D85 454 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 FAM71F2Q6NXP2 309 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 ZNF695Q8IW36 515 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 OR5M8Q8NGP6 311 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 LHFPL5Q8TAF8 219 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 ADTRPQ96IZ2 230 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 ST6GAL2Q96JF0 529 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 ZNF436Q9C0F3 470 aaPredicted RBP15.25■□□□□ 0.03
COMMD4-213ENST00000565834 RANGRFQ9HD47 186 aaPredicted RBP15.25■□□□□ 0.03
COMMD4-213ENST00000565834 ADAP1O75689 374 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 SIX6O95475 246 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 CDS2O95674 445 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 ARG1P05089 322 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 HOXB5P09067 269 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 HOXB4P17483 251 aaPredicted RBP15.25■□□□□ 0.03
COMMD4-213ENST00000565834 HLA-GP17693 338 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms