RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 RAB3CQ96E17 227 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 S100A13Q99584 98 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 TBL1XR1Q9BZK7 514 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 TLNRD1Q9H1K6 362 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 PLEKHF2Q9H8W4 249 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 TAF9BQ9HBM6 251 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 FAM206AQ9NX38 181 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 COPS7AQ9UBW8 275 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 ZNF230Q9UIE0 474 aaPredicted RBP3.41□□□□□ -1.86
LINC00561-201ENST00000565815 STARD10Q9Y365 291 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 MGAQ8IWI9 3026 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 A0A087WW49 117 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 NKX2-6A6NCS4 301 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 DHRS7CA6NNS2 312 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 EEF1E1-BLOC1S5C9J1V9 151 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 ZNF878C9JN71 531 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 FTCDNL1E5RQL4 147 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 CD5LO43866 347 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 ZNF354AO60765 605 aaPredicted RBP3.41□□□□□ -1.86
LINC00561-201ENST00000565815 NDUFS6O75380 124 aaKnown RBP3.41□□□□□ -1.86
LINC00561-201ENST00000565815 GLAP06280 429 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 SFTA3P0C7M3 94 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 CTLA4P16410 223 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 ZNF93P35789 620 aaPredicted RBP3.41□□□□□ -1.86
LINC00561-201ENST00000565815 RPL35P42766 123 aaKnown RBP3.41□□□□□ -1.86
LINC00561-201ENST00000565815 UNC119Q13432 240 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 RSU1Q15404 277 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 CHRFAM7AQ494W8 412 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 LRRC18Q8N456 261 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 ADAD2Q8NCV1 583 aaKnown RBP3.41□□□□□ -1.86
LINC00561-201ENST00000565815 OR4D6Q8NGJ1 314 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 RXFP4Q8TDU9 374 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 GPR119Q8TDV5 335 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 TMEM190Q8WZ59 177 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 MRGPRFQ96AM1 343 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 SEC22AQ96IW7 307 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 AMELYQ99218 206 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 SULT4A1Q9BR01 284 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 TM2D1Q9BX74 207 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 TMEM59Q9BXS4 323 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 PBOV1Q9GZY1 135 aa3.41□□□□□ -1.86
LINC00561-201ENST00000565815 A0A087WZ39 114 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 A0A1B0GTH9 108 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 LOC102725191A0A1B0GVB3 256 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 C13orf42A0A1B0GVH6 325 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 MEX3AA1L020 520 aaKnown RBP3.4□□□□□ -1.86
LINC00561-201ENST00000565815 MEIS3P1A6NDR6 274 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 UMAD1C9J7I0 102 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 K7EPK0 472 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 SSX5O60225 188 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 MED6O75586 246 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 DEDDO75618 318 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 F10P00742 488 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 IGKV3-20P01619 116 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 MUC1P15941 1255 aaPredicted RBP3.4□□□□□ -1.86
LINC00561-201ENST00000565815 AKR1C4P17516 323 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 DTYMKP23919 212 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 LAP3P28838 519 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 OPRM1P35372 400 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 PAX9P55771 341 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 PLCXD2Q0VAA5 305 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 DPPA3Q6W0C5 159 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 RPS19BP1Q86WX3 136 aaKnown RBP3.4□□□□□ -1.86
LINC00561-201ENST00000565815 OR9K2Q8NGE7 335 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 FNDC9Q8TBE3 224 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 ZNF721Q8TF20 911 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 CASTOR1Q8WTX7 329 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 PP6455Q8WZ26 134 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 SUCNR1Q9BXA5 334 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 NXF5Q9H1B4 397 aaKnown RBP3.4□□□□□ -1.86
LINC00561-201ENST00000565815 LPAR5Q9H1C0 372 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 RGCCQ9H4X1 137 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 METTL8Q9H825 291 aaKnown RBP3.4□□□□□ -1.86
LINC00561-201ENST00000565815 FAM60AQ9NP50 221 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 CACFD1Q9UGQ2 172 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 PPP1R3CQ9UQK1 317 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 KCNIP3Q9Y2W7 256 aa3.4□□□□□ -1.86
LINC00561-201ENST00000565815 FLNCQ14315 2725 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 CHD3Q12873 2000 aaKnown RBP3.4□□□□□ -1.87
LINC00561-201ENST00000565815 ITPR2Q14571 2701 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 A0A087WWC5 75 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 IGLV3-32A0A0A0MS00 114 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 DUXBA0A1W2PPF3 345 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 PCP4L1A6NKN8 68 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 H7C1C5 153 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 CCSO14618 274 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 GMFGO60234 142 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 CYTIPO60759 359 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 ICOSLGO75144 302 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 TTRP02766 147 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 FABP1P07148 127 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 PVRP15151 417 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 RPL12P30050 165 aaKnown RBP3.4□□□□□ -1.87
LINC00561-201ENST00000565815 P2RY1P47900 373 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 GLIPR1P48060 266 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 KCNJ3P48549 501 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 CRIP2P52943 208 aaPredicted RBP3.4□□□□□ -1.87
LINC00561-201ENST00000565815 MLF1P58340 268 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 LCN6P62502 163 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 ATXN7L3Q14CW9 347 aaPredicted RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms