RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 SAP30LQ9HAJ7 183 aa7.82□□□□□ -1.16
LINC00838-201ENST00000562956 ICE1Q9Y2F5 2266 aa7.82□□□□□ -1.16
LINC00838-201ENST00000562956 A0A0G2JRQ6 117 aa7.82□□□□□ -1.16
LINC00838-201ENST00000562956 VSTM5A8MXK1 200 aa7.82□□□□□ -1.16
LINC00838-201ENST00000562956 SNAPINO95295 136 aa7.82□□□□□ -1.16
LINC00838-201ENST00000562956 IGKV1-39P01597 117 aa7.82□□□□□ -1.16
LINC00838-201ENST00000562956 IGKV1D-39P04432 117 aa7.82□□□□□ -1.16
LINC00838-201ENST00000562956 WNT2P09544 360 aa7.82□□□□□ -1.16
LINC00838-201ENST00000562956 SMIM6P0DI80 62 aa7.82□□□□□ -1.16
LINC00838-201ENST00000562956 GZMHP20718 246 aa7.82□□□□□ -1.16
LINC00838-201ENST00000562956 RPL12P30050 165 aaKnown RBP7.82□□□□□ -1.16
LINC00838-201ENST00000562956 OR2B8PP59922 312 aa7.82□□□□□ -1.16
LINC00838-201ENST00000562956 TEX36Q5VZQ5 186 aa7.82□□□□□ -1.16
LINC00838-201ENST00000562956 TRAT1Q6PIZ9 186 aa7.82□□□□□ -1.16
LINC00838-201ENST00000562956 ZNF808Q8N4W9 903 aaPredicted RBP7.82□□□□□ -1.16
LINC00838-201ENST00000562956 FAM216BQ8N7L0 139 aa7.82□□□□□ -1.16
LINC00838-201ENST00000562956 IL22RA2Q969J5 263 aa7.82□□□□□ -1.16
LINC00838-201ENST00000562956 C20orf24Q9BUV8 137 aa7.82□□□□□ -1.16
LINC00838-201ENST00000562956 A0A1B0GV90 55 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 DUXBA0A1W2PPF3 345 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 C1orf196B1AJZ1 125 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 OMGP23515 440 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 HTD2P86397 168 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 ZNF585BQ52M93 769 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 FGFRL1Q8N441 504 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 CACNA1DQ01668 2161 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 CLEC18AA5D8T8 446 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 LRRC30A6NM36 301 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 ST8SIA5O15466 376 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 ST8SIA3O43173 380 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 MUC1P15941 1255 aaPredicted RBP7.81□□□□□ -1.16
LINC00838-201ENST00000562956 APOBEC3AP31941 199 aaPredicted RBP7.81□□□□□ -1.16
LINC00838-201ENST00000562956 F2RL1P55085 397 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 EIF4EBP1Q13541 118 aaPredicted RBP7.81□□□□□ -1.16
LINC00838-201ENST00000562956 IZUMO4Q1ZYL8 232 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 CXorf66Q5JRM2 361 aaPredicted RBP7.81□□□□□ -1.16
LINC00838-201ENST00000562956 CLEC9AQ6UXN8 241 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 ZNF788Q6ZQV5 615 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 CLEC18CQ8NCF0 446 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 DMBX1Q8NFW5 382 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 ABHD14BQ96IU4 210 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 AGMATQ9BSE5 352 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 EGLN1Q9GZT9 426 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 OR51M1Q9H341 326 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 ZNF665Q9H7R5 613 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 DYNLRB1Q9NP97 96 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 KCNJ16Q9NPI9 418 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 RCL1Q9Y2P8 373 aaKnown RBP7.81□□□□□ -1.16
LINC00838-201ENST00000562956 POMT1Q9Y6A1 747 aa7.81□□□□□ -1.16
LINC00838-201ENST00000562956 KIAA2026Q5HYC2 2103 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 E5RGE8 158 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 NXPH3O95157 252 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 S100PP25815 95 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 RPL30P62888 115 aaKnown RBP7.8□□□□□ -1.16
LINC00838-201ENST00000562956 OR2B11Q5JQS5 317 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 UTF1Q5T230 341 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 CDPF1Q6NVV7 123 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 BTNL3Q6UXE8 466 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 STOML3Q8TAV4 291 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 CCL17Q92583 94 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 PLEKHF2Q9H8W4 249 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 LIN7CQ9NUP9 197 aaKnown RBP7.8□□□□□ -1.16
LINC00838-201ENST00000562956 CISD1Q9NZ45 108 aaKnown RBP7.8□□□□□ -1.16
LINC00838-201ENST00000562956 PSG11Q9UQ72 335 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 NSG2Q9Y328 171 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 RNF115Q9Y4L5 304 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 ROS1P08922 2347 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 hCG_1809904A0A1W2PP81 198 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 A0A1W2PR64 198 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 A0A1W2PRV1 198 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 TMEM178BH3BS89 294 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 RAMP3O60896 148 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 CLN5O75503 358 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 IGHV3-7P01780 117 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 IGHV2-70P01814 119 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 CGB3P0DN86 165 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 CGB7P0DN87 165 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 EPHA1P21709 976 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 LOXL3P58215 753 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 TFF3Q07654 80 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 C17orf58Q2M2W7 97 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 MORN2Q502X0 79 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 TCF23Q7RTU1 214 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 GPR146Q96CH1 333 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 BSCL2Q96G97 398 aaPredicted RBP7.8□□□□□ -1.16
LINC00838-201ENST00000562956 SPIN2AQ99865 258 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 SPIN2BQ9BPZ2 258 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 MAGT1Q9H0U3 335 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 RPS10P5Q9NQ39 176 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 UQCC1Q9NVA1 299 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 CALYQ9NYX4 217 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 OR6C3Q9NZP0 311 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 GNG12Q9UBI6 72 aa7.8□□□□□ -1.16
LINC00838-201ENST00000562956 COLCA2A8K830 154 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 F2RL2O00254 374 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 TMPRSS2O15393 492 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 IGKV1-5P01602 117 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 NKX2-1P43699 371 aaPredicted RBP7.79□□□□□ -1.16
LINC00838-201ENST00000562956 LINC00205P59089 165 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 EFNB3Q15768 340 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms